CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 6
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d032934_P001	Maize	mitochondrion	62.67	84.77
HORVU3Hr1G081750.4	Barley	mitochondrion	79.26	78.79
Os10t0422300-00	Rice	mitochondrion	50.37	70.83
TraesCS3B01G419500.1	Wheat	mitochondrion	50.96	70.06
TraesCS3D01G380400.1	Wheat	mitochondrion	50.67	69.65
TraesCS3A01G389400.1	Wheat	mitochondrion	50.37	69.25
HORVU4Hr1G025220.1	Barley	cytosol, plastid	33.78	61.46
VIT_01s0127g00660.t01	Wine grape	cytosol	29.04	43.36
GSMUA_Achr4P18270_001	Banana	mitochondrion	28.15	42.7
Bra012965.1-P	Field mustard	mitochondrion	28.3	39.54
CDY02152	Canola	mitochondrion	28.3	39.54
AT5G61370.1	Thale cress	mitochondrion	28.15	39.01
KRH03514	Soybean	mitochondrion	28.3	38.98
CDY68950	Canola	mitochondrion	27.7	38.72
KRH56887	Soybean	mitochondrion	25.78	38.41
EER97500	Sorghum	mitochondrion	16.44	22.93

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
Gene3D:1.25.40.10	MapMan:18.4.10	Gene3D:3.30.200.20	UniProt:A0A1B6QKP5	InterPro:Bud32	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR002885	InterPro:IPR011990
EnsemblPlants:KXG38503	ProteinID:KXG38503	ProteinID:KXG38503.2	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PFAM:PF01535
ScanProsite:PS00109	PFscan:PS50011	PFscan:PS51375	InterPro:Pentatricopeptide_repeat	InterPro:Prot_kinase_dom	SMART:SM00220
EnsemblPlantsGene:SORBI_3001G244700	SUPFAM:SSF56112	TIGRFAMs:TIGR00756	TIGRFAMs:TIGR03724	InterPro:TPR-like_helical_dom_sf	InterPro:Tyr_kinase_AS
UniParc:UPI000B8B9DEA	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:25518645..25523218

Molecular Weight (calculated)

74470.8 Da

IEP (calculated)

8.816

GRAVY (calculated)

-0.069

Length

675 amino acids

Sequence
(BLAST)

001: MNRLASWRFT AGLTRGALPP CRRPIGRALC SGAPQDGEME AAVRDVVCFG SGSLDEVGSR LDRLGVAVSP HLVGRVIDLC GETGGRSGRR LLRFLAWCRS
101: KHPGALGEEA LDRAIGALAR AGDLTAMRIA ITDAEKDWRR MAPETFSTVV DALVKAGRED EAVRLFRGLE QQRLLPERGA SVGGDGVWSS SLVMVEALCK
201: RGHAREAQGV VWHHKSELSA EPMVSIVERS LLHGWCVHGN AKEARKVLNE MKSSGVPLGL PSFHDFLHCV CHRNLKFNPS ALVPEAMDIL TEMRSCGVPL
301: AASSFNILLS CLGRARRVKE AYRILYLMTE GKAGCSPDWV SYYLVVRVLY LTGRIVRGKR LVDAMLESGV LPAAKFFHGL IGVLCGTEEV DHALDMFKLM
401: KRCELVDARI YDLLIEKLCR IGRFEIGREL WDEATKSGLV LGCSQDLLDP LKTEEQEQDF GVLLKQGAEG RVFASTFVGR KCVIKERFSK KYRHPLLDSK
501: LTLKRLNAEA RCITKARKLG VPTPVLYAVD PLLHTLTFEY VDGLSVKDIL LGFGSDGVNE ERLNDIATQI GNAVGKLHDG GLVHGDLTTS NMIIKNSNYQ
601: LVLIDFGLSF TSTIPEDKAV DLYVLERALI SMHSSCGDVM EKILAAYRKA SKQWCSTQNK LAQVRQRGRK RTMVG

Best Arabidopsis Sequence Match ( AT5G26110.1 )
(BLAST)

001: MDCEENVRDE SLVLIKQGAE ARVFESTFAG RRSIVKERFS KKYRHPILDA KLTLKRLNAE ARCMTKARKL GVCTPVLYAV DTLLHSLTLE YIEGVSVKDI
101: FLEFGTNGVV EERLDDVAAQ IGAAIAKLHD GGLAHGDLTT SNMLVRSGTN QLVLIDFGLS VTSTLPEDKA VDLYVLERAL LSMHSSCGNV MDRILTAYRK
201: SSKQWSATFN KLAQVRQRGR KRTMIG

Arabidopsis Description

Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q94K14]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.