Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 5
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G389400.1 | Wheat | mitochondrion | 96.94 | 96.94 |
| TraesCS3B01G419500.1 | Wheat | mitochondrion | 96.94 | 96.94 |
| Os10t0422300-00 | Rice | mitochondrion | 73.32 | 75.0 |
| HORVU4Hr1G025220.1 | Barley | cytosol, plastid | 55.19 | 73.05 |
| Zm00001d032934_P001 | Maize | mitochondrion | 70.88 | 69.74 |
| HORVU3Hr1G081750.4 | Barley | mitochondrion | 88.19 | 63.77 |
| KXG38503 | Sorghum | mitochondrion | 69.65 | 50.67 |
| VIT_01s0127g00660.t01 | Wine grape | cytosol | 40.33 | 43.81 |
| GSMUA_Achr4P18270_001 | Banana | mitochondrion | 38.09 | 42.02 |
| CDY02152 | Canola | mitochondrion | 38.9 | 39.54 |
| KRH56887 | Soybean | mitochondrion | 36.46 | 39.51 |
| Bra012965.1-P | Field mustard | mitochondrion | 38.7 | 39.34 |
| AT5G61370.1 | Thale cress | mitochondrion | 38.9 | 39.22 |
| CDY68950 | Canola | mitochondrion | 38.49 | 39.13 |
| KRH03514 | Soybean | mitochondrion | 38.7 | 38.78 |
| TraesCS2D01G182800.1 | Wheat | mitochondrion | 21.18 | 21.58 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G380400.1 | EnsemblPlantsGene:TraesCS3D01G380400 | Gene3D:1.25.40.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | InterPro:IPR002885 |
| InterPro:IPR011990 | InterPro:Pentatricopeptide_repeat | InterPro:TPR-like_helical_dom_sf | PANTHER:PTHR24015 | PANTHER:PTHR24015:SF620 | PFAM:PF01535 |
| PFAM:PF12854 | PFscan:PS51375 | SEG:seg | TIGRFAMs:TIGR00756 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr3D:-:496747162..496748637
Molecular Weight (calculated)
54095.6 Da
IEP (calculated)
8.572
GRAVY (calculated)
-0.147
Length
491 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMVMRRSVT ALSLSQSSLA PSSRLGRCRI RRAMCSGAWQ EGESEAAVRD VVCFGSGSLD EVGSRLDRLN FAISPALVRR VIDSCSERSD SGRRLLRFLS
101: WCRSKDPAGL GDEEHDRAIA VLARMGDLTA IKIAVGDGEK DGRRMAPETF TAVVEALVKA GKEDDAVRLF RGLERQKLLP QQGPGAGGEG IWCSSLAMVQ
201: TLCMKGYARE AQGVVWHHKS ELSAEPMVSI VQRSLLHGWC VHGNAKEARR VLDDIKSSGC PLGLPSFNDF LNCVCHRNLK FNPSALVSEA MDILTEMRSY
301: GVTPDSSSFN ILLSCLGRAR RVKEAYKILY LMREGEEGCS PDWVSYYLVV KVLYLTDRII RGKRLVEDML ESGVLPTAKF FHGLIGILCG TEKVDHALDM
401: FKIMKSCGLV DTHTYDLLIE KLSRSGRFEV AKELWDDATK NGIVLGCSSD LLDPLKTEVF RPVRPAQRQT SQNCKSLIPT KKGTAAGAIN K
101: WCRSKDPAGL GDEEHDRAIA VLARMGDLTA IKIAVGDGEK DGRRMAPETF TAVVEALVKA GKEDDAVRLF RGLERQKLLP QQGPGAGGEG IWCSSLAMVQ
201: TLCMKGYARE AQGVVWHHKS ELSAEPMVSI VQRSLLHGWC VHGNAKEARR VLDDIKSSGC PLGLPSFNDF LNCVCHRNLK FNPSALVSEA MDILTEMRSY
301: GVTPDSSSFN ILLSCLGRAR RVKEAYKILY LMREGEEGCS PDWVSYYLVV KVLYLTDRII RGKRLVEDML ESGVLPTAKF FHGLIGILCG TEKVDHALDM
401: FKIMKSCGLV DTHTYDLLIE KLSRSGRFEV AKELWDDATK NGIVLGCSSD LLDPLKTEVF RPVRPAQRQT SQNCKSLIPT KKGTAAGAIN K
001: MMSTTVRLNR FTYLTSTAKL TRYFCSHHLV DRSETALHEV IRIVSSPVGG LDDLEENLNQ VSVSPSSNLV TQVIESCKNE TSPRRLLRFF SWSCKSLGSS
101: LHDKEFNYVL RVLAEKKDHT AMQILLSDLR KENRAMDKQT FSIVAETLVK VGKEEDAIGI FKILDKFSCP QDGFTVTAII SALCSRGHVK RALGVMHHHK
201: DVISGNELSV YRSLLFGWSV QRNVKEARRV IQDMKSAGIT PDLFCFNSLL TCLCERNVNR NPSGLVPEAL NIMLEMRSYK IQPTSMSYNI LLSCLGRTRR
301: VRESCQILEQ MKRSGCDPDT GSYYFVVRVL YLTGRFGKGN QIVDEMIERG FRPERKFYYD LIGVLCGVER VNFALQLFEK MKRSSVGGYG QVYDLLIPKL
401: CKGGNFEKGR ELWEEALSID VTLSCSISLL DPSVTEVFKP MKMKEEAAMV DRRALNLKIH ARMNKTKPKL KLKPKRRSKT KKKNLQH
101: LHDKEFNYVL RVLAEKKDHT AMQILLSDLR KENRAMDKQT FSIVAETLVK VGKEEDAIGI FKILDKFSCP QDGFTVTAII SALCSRGHVK RALGVMHHHK
201: DVISGNELSV YRSLLFGWSV QRNVKEARRV IQDMKSAGIT PDLFCFNSLL TCLCERNVNR NPSGLVPEAL NIMLEMRSYK IQPTSMSYNI LLSCLGRTRR
301: VRESCQILEQ MKRSGCDPDT GSYYFVVRVL YLTGRFGKGN QIVDEMIERG FRPERKFYYD LIGVLCGVER VNFALQLFEK MKRSSVGGYG QVYDLLIPKL
401: CKGGNFEKGR ELWEEALSID VTLSCSISLL DPSVTEVFKP MKMKEEAAMV DRRALNLKIH ARMNKTKPKL KLKPKRRSKT KKKNLQH
Arabidopsis Description
Pentatricopeptide repeat-containing protein At5g61370, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FLJ6]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.