Factsheet for Os10t0422300-00

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 5
nucleus 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G419500.1	Wheat	mitochondrion	75.83	74.13
TraesCS3A01G389400.1	Wheat	mitochondrion	75.21	73.52
TraesCS3D01G380400.1	Wheat	mitochondrion	75.0	73.32
Zm00001d032934_P001	Maize	mitochondrion	73.75	70.94
HORVU4Hr1G025220.1	Barley	cytosol, plastid	50.0	64.69
HORVU3Hr1G081750.4	Barley	mitochondrion	74.17	52.43
KXG38503	Sorghum	mitochondrion	70.83	50.37
VIT_01s0127g00660.t01	Wine grape	cytosol	41.67	44.25
GSMUA_Achr4P18270_001	Banana	mitochondrion	39.38	42.47
Bra012965.1-P	Field mustard	mitochondrion	41.25	40.99
CDY02152	Canola	mitochondrion	41.25	40.99
CDY68950	Canola	mitochondrion	41.04	40.79
KRH56887	Soybean	mitochondrion	38.33	40.62
AT5G61370.1	Thale cress	mitochondrion	40.42	39.84
KRH03514	Soybean	mitochondrion	40.21	39.39
Os07t0603900-01	Rice	mitochondrion	22.08	21.81

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.1	UniProt:A0A0P0XUC4	ProteinID:BAT10905.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR002885	InterPro:IPR011990	EnsemblPlantsGene:Os10g0422300	EnsemblPlants:Os10t0422300-00	PFAM:PF01535
PFscan:PS51375	PANTHER:PTHR24015	PANTHER:PTHR24015:SF620	InterPro:Pentatricopeptide_repeat	TIGRFAMs:TIGR00756	InterPro:TPR-like_helical_dom_sf
UniParc:UPI000393C3C9	SEG:seg	:	:	:	:

Description

Pentatricopeptide repeat domain containing protein. (Os10t0422300-00)

Coordinates

chr10:+:14926013..14928966

Molecular Weight (calculated)

52835.5 Da

IEP (calculated)

9.344

GRAVY (calculated)

-0.130

Length

480 amino acids

Sequence
(BLAST)

001: MMATLARRSM VALGRRALCS GSDLEAAARE VVCSGAGSLD EVGGALDRLG VAVSPAMVAR VIDACSERMG SGRRLLRFLS WCRSKDAGGI GDEALDSAIA
101: ALARMGDLTA MRIAVADAEK DGRRMSPETF TVVVEALVKL GKEDEAVRLF RGLERQRLLP RRDAGDGGEG VWSSSLAMVQ ALCMKGHARE AQGVVWHHKS
201: ELSVEPMVSI VQRSLLHGWC VHGNAKEARR VLDDIKSSCT PLGLPSFNDY LHCLCHRNLK FNPSALVTEA MDVLSEMRSY GVTPDASSLN ILLSCLGRAR
301: RVKESYRILY LMREGKAGCS PDWVSYYLVV RVLYLTGRII RGKRLVDDML ESGVLPTAKF FHGLIGVLCG TEKVDHGLDM FRLMKRCQLV DTHTYDLLIE
401: KLCRNGRFEN GKELWDDAKK NGFMLGCSED LLDPLKTEVF RPVCAAQKLS SQSNKRLVQK KKIGSVETRK KGAARAATRK

Best Arabidopsis Sequence Match ( AT5G61370.1 )
(BLAST)

001: MMSTTVRLNR FTYLTSTAKL TRYFCSHHLV DRSETALHEV IRIVSSPVGG LDDLEENLNQ VSVSPSSNLV TQVIESCKNE TSPRRLLRFF SWSCKSLGSS
101: LHDKEFNYVL RVLAEKKDHT AMQILLSDLR KENRAMDKQT FSIVAETLVK VGKEEDAIGI FKILDKFSCP QDGFTVTAII SALCSRGHVK RALGVMHHHK
201: DVISGNELSV YRSLLFGWSV QRNVKEARRV IQDMKSAGIT PDLFCFNSLL TCLCERNVNR NPSGLVPEAL NIMLEMRSYK IQPTSMSYNI LLSCLGRTRR
301: VRESCQILEQ MKRSGCDPDT GSYYFVVRVL YLTGRFGKGN QIVDEMIERG FRPERKFYYD LIGVLCGVER VNFALQLFEK MKRSSVGGYG QVYDLLIPKL
401: CKGGNFEKGR ELWEEALSID VTLSCSISLL DPSVTEVFKP MKMKEEAAMV DRRALNLKIH ARMNKTKPKL KLKPKRRSKT KKKNLQH

Arabidopsis Description

Pentatricopeptide repeat-containing protein At5g61370, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FLJ6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.