Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH69095 | Soybean | nucleus | 13.81 | 45.64 |
| VIT_05s0049g01490.t01 | Wine grape | nucleus | 34.42 | 34.56 |
| CDX84685 | Canola | nucleus | 12.89 | 34.14 |
| GSMUA_Achr11P... | Banana | cytosol, endoplasmic reticulum, golgi, plastid | 14.62 | 31.72 |
| GSMUA_Achr11P... | Banana | nucleus | 15.23 | 31.58 |
| Solyc09g090420.2.1 | Tomato | nucleus | 30.05 | 26.79 |
| OQU93274 | Sorghum | nucleus | 24.97 | 25.39 |
| Zm00001d048364_P002 | Maize | nucleus | 24.77 | 25.0 |
| Bra022941.1-P | Field mustard | nucleus | 28.93 | 22.6 |
| CDX79530 | Canola | nucleus | 27.51 | 22.51 |
| Os01t0956600-01 | Rice | nucleus | 13.6 | 22.04 |
| Os03t0138100-01 | Rice | nucleus | 14.21 | 21.77 |
| AT2G33435.1 | Thale cress | nucleus | 27.01 | 20.08 |
| KRH64800 | Soybean | nucleus | 10.66 | 17.5 |
| KRH56450 | Soybean | nucleus | 10.56 | 17.19 |
Protein Annotations
| EntrezGene:100810537 | Gene3D:3.30.70.330 | MapMan:35.1 | EMBL:ACUP02006076 | ncoils:Coil | EnsemblPlantsGene:GLYMA_10G005000 |
| GO:GO:0000243 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005654 | GO:GO:0008187 | GO:GO:0016607 |
| GO:GO:0030628 | GO:GO:0071004 | GO:GO:0089701 | InterPro:IPR000504 | InterPro:IPR012677 | UniProt:K7LGQ7 |
| EnsemblPlants:KRH31685 | ProteinID:KRH31685 | ProteinID:KRH31685.1 | InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF00076 | PFscan:PS50102 |
| PANTHER:PTHR23139 | PANTHER:PTHR23139:SF56 | InterPro:RBD_domain_sf | InterPro:RRM_dom | SMART:SM00360 | SUPFAM:SSF54928 |
| UniParc:UPI00029687DF | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr10:-:500812..515603
Molecular Weight (calculated)
110544.0 Da
IEP (calculated)
7.298
GRAVY (calculated)
-0.816
Length
985 amino acids
Sequence
(BLAST)
(BLAST)
001: MSKSNRSKEK HGKSNWLSEH NCDEESAART RPFSFEEIML RRRNKELLGN SPKEKELLEN VKDPAHGCSS EKITDHFKSA RIYKHDKSLS FGMEKHVSEE
101: LVKVTSRKKV ESAIVKEDDL TEGKRRANHI LETKSSAGLN NKARITKEKT EKEMSGYKKN ERVHDSSEYR AGNKHSRDSV YKDSYVETNR PKSEREIKKK
201: NHIGGDENHN MYVTEKRHDK DRDNRWKLKK RLSNDSEEVP EKKHYRESDK DKHAGGRAKY ERETKRKYKN GDDETQDRNT SRKQDAVKHH NMHIYERKER
301: RVKVKSHNEE LTAKRRCSRS REREDRRSPS FSPREQKRTY QDGERKELSM HSLKDSSRTK NPDIDRNRVS TNGSSGHHHR HGVSTSGLGG YSPRKRKSEA
401: AAKTPSPSKH SLEKKRAGWD LPPAGTNNPS AVVSSSFPVS NCAVLSNMHD VVSTSSLDLA LVKPLPVSFP SDVSTGKNTN IDSVQLTQAT RPIRRLYLEN
501: LPASASEKAV MDCFNNLLLS ARVNHIQQAQ PCICCILHKD KGQALVEFLT ADDASAALSF DGSMLFGSIV KIRRPKDYIE VATGEPARSV DVAVSISDVV
601: IDSPHKIFIG GISNHLSSEM LMEIAGVFGS LKAYHFETKV NNGPCAFLEY VDHSVTIKAC AGLNGMKLGG EVLTVLQAMP DASPLENAGE SLSYGVPEHA
701: KPLLRKPTQV LEINNVFAAD TILSLSDMAI EEILDDVRLE CARFGTIKSI NVVKHSSGEN LATKLEECKV INKVDAKEVS QDTNCITNNT ESSFSDKATY
801: PDFEGTNGME IHDNNEMEEV KVDEGSCVYV DKNAEVFDYK SCREHVDDSA VEDVGDKGIP CSIIQECPDQ QDTPNDGPEF YDKMVANDID VNIENNMESK
901: DTVCAFQEGF SEWDISAELV SPQKSIDTEE DIYGHVFKPG SVLVEYGRAE ACCSAAHSLH GRFFDGRIVT VGYVALSLYR SRFTK
101: LVKVTSRKKV ESAIVKEDDL TEGKRRANHI LETKSSAGLN NKARITKEKT EKEMSGYKKN ERVHDSSEYR AGNKHSRDSV YKDSYVETNR PKSEREIKKK
201: NHIGGDENHN MYVTEKRHDK DRDNRWKLKK RLSNDSEEVP EKKHYRESDK DKHAGGRAKY ERETKRKYKN GDDETQDRNT SRKQDAVKHH NMHIYERKER
301: RVKVKSHNEE LTAKRRCSRS REREDRRSPS FSPREQKRTY QDGERKELSM HSLKDSSRTK NPDIDRNRVS TNGSSGHHHR HGVSTSGLGG YSPRKRKSEA
401: AAKTPSPSKH SLEKKRAGWD LPPAGTNNPS AVVSSSFPVS NCAVLSNMHD VVSTSSLDLA LVKPLPVSFP SDVSTGKNTN IDSVQLTQAT RPIRRLYLEN
501: LPASASEKAV MDCFNNLLLS ARVNHIQQAQ PCICCILHKD KGQALVEFLT ADDASAALSF DGSMLFGSIV KIRRPKDYIE VATGEPARSV DVAVSISDVV
601: IDSPHKIFIG GISNHLSSEM LMEIAGVFGS LKAYHFETKV NNGPCAFLEY VDHSVTIKAC AGLNGMKLGG EVLTVLQAMP DASPLENAGE SLSYGVPEHA
701: KPLLRKPTQV LEINNVFAAD TILSLSDMAI EEILDDVRLE CARFGTIKSI NVVKHSSGEN LATKLEECKV INKVDAKEVS QDTNCITNNT ESSFSDKATY
801: PDFEGTNGME IHDNNEMEEV KVDEGSCVYV DKNAEVFDYK SCREHVDDSA VEDVGDKGIP CSIIQECPDQ QDTPNDGPEF YDKMVANDID VNIENNMESK
901: DTVCAFQEGF SEWDISAELV SPQKSIDTEE DIYGHVFKPG SVLVEYGRAE ACCSAAHSLH GRFFDGRIVT VGYVALSLYR SRFTK
0001: MNEVNKQKEN RDGHETLVNE EGSAARTRPT SVEEIRLRRK RKESLENVKE ETVGAAQLLG YDLVEKASDY HESKNLRREE HVEDSSRKEK EAISRCREEK
0101: IEKPMKEDPV GAAQLPDKNL VEKVLDCHES EKGYDRSEKL SHEELVMDSS RKKEEAISSS REEKLDKPIK DDLVGTAQLL GNDLVEKVPE YHVSEKEHDG
0201: SKNVRREERV KDSLRKKEDI TSSSRDETPM KEDHVGAAQL RGNDIVEKVS DNHASEKGHD KSNKVRREEH VKDSSRKKED YISSFREEKS RKEDHVGAAM
0301: LLGHDIVDKF SDYHASEKRH DRSKKVRRDE HVKESSRKKE DATSGSTEEK SMKEDHAGAA QLLGHDIVEK VSDYHASEKG HDRSTKVRRE ERVKDSSRKK
0401: EDATSGSREE RVDNSTKEDP VGAAQLLGND FVEKVSDYHT SERGHERSKK VRREERVKDN SRKKEEAISS SRGEKPIKED HVGAAQLLGN DLVEMVSDYH
0501: ETEKGYDRSK KLSREERVKD SSRKKEEAIS SSREENLDKQ KKDESTSNRK RKAEGECSTA ETESIEEHSK DRRGKKEETN SNCREERRDK KMKKEDLASN
0601: RKIEGEIPTT ETKTMTDRDG LCSKKRLRSL VVADVPRDES SIKPDNGDKR KNQNGNHKKN REINMSKRHD PGKVHSVEVS ERWERREQPK SRQRDLREKR
0701: RRSRSRDHGQ DRQKRSSPLP RAEKATSRHK RNHEERSENV VKDRSGKHHC NDNEDKVTST VSNKSRRYSA SKSELGGYSP RKRREQASTK AASPPNLSSE
0801: KKSAKWGLAA TVTAGMFSDS VFSGLQAATQ TAYPTISEAS LTLLKPLMVM DAPFRTPPAR QTTSFDSVQL TESTRRMRRL YAENVPDSAS EKSLIECFNG
0901: YMLSSGSNHI KGSEPCISCI INKEKSQALV EFLTPQDASA ALSLDGCSFA GSNLKIRRPK DYVRTTNGEL EKKEPAANAV SDNVEDSSNK IFIGGFSKAI
1001: SSEMLMEIVS VFGPLKAYRF VSNNDLNQRC AFLEYTDGSV TLKACAGLNG MRLGGSVITA VCAFPDASSV AVNENPPFYG IPSHAKPLLG KPKNILKLKN
1101: VVDPEDLTSF SEQEVKEILE DVRLECARFG VIKSINILEH KSKDITVSET NPLLNLESTD SKEMNVSVIE EKDEGSEKAE DIADNVDLAE VVMPDSLTGE
1201: DKLCEPCSDT AAETSTQENE DLHSTEQEHC EKIVEESAQA EAENPQEVAS VRTVKTRWDA GDKIEEEQEE DPEDVFETGC IFIEYRRPEA TCDAAHSLHG
1301: RLYDNRIVKA EYVSKELYQI RFPSG
0101: IEKPMKEDPV GAAQLPDKNL VEKVLDCHES EKGYDRSEKL SHEELVMDSS RKKEEAISSS REEKLDKPIK DDLVGTAQLL GNDLVEKVPE YHVSEKEHDG
0201: SKNVRREERV KDSLRKKEDI TSSSRDETPM KEDHVGAAQL RGNDIVEKVS DNHASEKGHD KSNKVRREEH VKDSSRKKED YISSFREEKS RKEDHVGAAM
0301: LLGHDIVDKF SDYHASEKRH DRSKKVRRDE HVKESSRKKE DATSGSTEEK SMKEDHAGAA QLLGHDIVEK VSDYHASEKG HDRSTKVRRE ERVKDSSRKK
0401: EDATSGSREE RVDNSTKEDP VGAAQLLGND FVEKVSDYHT SERGHERSKK VRREERVKDN SRKKEEAISS SRGEKPIKED HVGAAQLLGN DLVEMVSDYH
0501: ETEKGYDRSK KLSREERVKD SSRKKEEAIS SSREENLDKQ KKDESTSNRK RKAEGECSTA ETESIEEHSK DRRGKKEETN SNCREERRDK KMKKEDLASN
0601: RKIEGEIPTT ETKTMTDRDG LCSKKRLRSL VVADVPRDES SIKPDNGDKR KNQNGNHKKN REINMSKRHD PGKVHSVEVS ERWERREQPK SRQRDLREKR
0701: RRSRSRDHGQ DRQKRSSPLP RAEKATSRHK RNHEERSENV VKDRSGKHHC NDNEDKVTST VSNKSRRYSA SKSELGGYSP RKRREQASTK AASPPNLSSE
0801: KKSAKWGLAA TVTAGMFSDS VFSGLQAATQ TAYPTISEAS LTLLKPLMVM DAPFRTPPAR QTTSFDSVQL TESTRRMRRL YAENVPDSAS EKSLIECFNG
0901: YMLSSGSNHI KGSEPCISCI INKEKSQALV EFLTPQDASA ALSLDGCSFA GSNLKIRRPK DYVRTTNGEL EKKEPAANAV SDNVEDSSNK IFIGGFSKAI
1001: SSEMLMEIVS VFGPLKAYRF VSNNDLNQRC AFLEYTDGSV TLKACAGLNG MRLGGSVITA VCAFPDASSV AVNENPPFYG IPSHAKPLLG KPKNILKLKN
1101: VVDPEDLTSF SEQEVKEILE DVRLECARFG VIKSINILEH KSKDITVSET NPLLNLESTD SKEMNVSVIE EKDEGSEKAE DIADNVDLAE VVMPDSLTGE
1201: DKLCEPCSDT AAETSTQENE DLHSTEQEHC EKIVEESAQA EAENPQEVAS VRTVKTRWDA GDKIEEEQEE DPEDVFETGC IFIEYRRPEA TCDAAHSLHG
1301: RLYDNRIVKA EYVSKELYQI RFPSG
Arabidopsis Description
RNA-binding (RRM/RBD/RNP motifs) family protein [Source:TAIR;Acc:AT2G33435]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.