Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- extracellular 4
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH42324 | Soybean | plastid | 63.83 | 60.81 |
| KRH58452 | Soybean | nucleus, plastid | 64.54 | 60.67 |
| GSMUA_Achr4P15000_001 | Banana | nucleus | 31.21 | 38.26 |
| GSMUA_Achr4P07950_001 | Banana | nucleus | 33.33 | 36.15 |
| AT2G34450.2 | Thale cress | nucleus, plastid | 36.88 | 34.21 |
| TraesCS3A01G242800.1 | Wheat | nucleus | 31.21 | 34.11 |
| TraesCS3D01G242800.1 | Wheat | nucleus | 30.5 | 33.33 |
| Bra021911.1-P | Field mustard | nucleus | 35.46 | 33.11 |
| HORVU3Hr1G060620.1 | Barley | nucleus | 29.79 | 32.06 |
| Os01t0666200-01 | Rice | nucleus | 29.08 | 30.83 |
| Zm00001d043946_P001 | Maize | nucleus, plastid | 27.66 | 28.06 |
| KRH39434 | Soybean | nucleus | 25.53 | 25.35 |
| KRH07880 | Soybean | nucleus | 24.82 | 25.18 |
| KRH65770 | Soybean | nucleus | 26.95 | 22.89 |
| OQU87294 | Sorghum | plastid | 30.5 | 22.75 |
| KRH75875 | Soybean | nucleus | 26.24 | 21.89 |
| KRH51597 | Soybean | nucleus | 24.11 | 21.66 |
| KRH60915 | Soybean | nucleus | 25.53 | 19.89 |
| Zm00001d011528_P001 | Maize | mitochondrion, plastid | 15.6 | 19.82 |
| TraesCS3B01G270900.1 | Wheat | nucleus | 31.21 | 18.33 |
| KRH36171 | Soybean | nucleus | 24.82 | 17.5 |
| KRG90584 | Soybean | cytosol, nucleus, plastid | 24.11 | 16.27 |
| KRH75844 | Soybean | cytosol | 9.93 | 12.28 |
Protein Annotations
| EMBL:ACUP02003263 | EnsemblPlants:KRH58451 | EnsemblPlantsGene:GLYMA_05G128900 | InterPro:HMG_box_dom_sf | InterPro:IPR036910 | PANTHER:PTHR13711 |
| PANTHER:PTHR13711:SF200 | ProteinID:KRH58451 | ProteinID:KRH58451.1 | SUPFAM:SSF47095 | UniParc:UPI0006EDC646 | UniProt:A0A0R0K1B9 |
| MapMan:35.2 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr5:+:32226353..32228992
Molecular Weight (calculated)
16658.0 Da
IEP (calculated)
9.699
GRAVY (calculated)
-0.719
Length
141 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEFNKKMLW NIKFIFCCLA GNKLVLRLKS NDGIKRSVQQ TNSRKKLKAK QKFDAMKQKK PLSGFFYFLE DFRKEFQVRN PDVKSKRDEK AQYFDIATKK
101: HDEFDSAMAE FNKKMISNLS FLLASELTLV DETDEESEFD E
101: HDEFDSAMAE FNKKMISNLS FLLASELTLV DETDEESEFD E
001: MTKRAPKSGP LSPSCSGGSS RNLELAVKSS EGARRSTRLR LQPLRKPKTS PKKKPVKLQT KMPKKPATAF FFFLDDFRKQ YQEENPDVKS MREIGKTCGE
101: KWKTMTYEEK VKYYDIATEK REEFHRAMTE YTKRMESGAH DESETDSDYS E
101: KWKTMTYEEK VKYYDIATEK REEFHRAMTE YTKRMESGAH DESETDSDYS E
Arabidopsis Description
HMG-box (high mobility group) DNA-binding family protein [Source:TAIR;Acc:AT2G34450]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.