Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- plastid 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT2G34450.2 | Thale cress | nucleus, plastid | 78.81 | 78.29 |
| GSMUA_Achr4P15000_001 | Banana | nucleus | 43.71 | 57.39 |
| KRH42324 | Soybean | plastid | 55.63 | 56.76 |
| KRH58452 | Soybean | nucleus, plastid | 54.97 | 55.33 |
| GSMUA_Achr4P07950_001 | Banana | nucleus | 45.7 | 53.08 |
| Os01t0666200-01 | Rice | nucleus | 43.71 | 49.62 |
| TraesCS3D01G242800.1 | Wheat | nucleus | 40.4 | 47.29 |
| HORVU3Hr1G060620.1 | Barley | nucleus | 40.4 | 46.56 |
| TraesCS3A01G242800.1 | Wheat | nucleus | 39.07 | 45.74 |
| Zm00001d043946_P001 | Maize | nucleus, plastid | 41.72 | 45.32 |
| Zm00001d011528_P001 | Maize | mitochondrion, plastid | 26.49 | 36.04 |
| KRH58451 | Soybean | extracellular | 33.11 | 35.46 |
| OQU87294 | Sorghum | plastid | 43.71 | 34.92 |
| Bra011624.1-P | Field mustard | nucleus | 29.14 | 31.21 |
| Bra025838.1-P | Field mustard | nucleus, plastid | 27.15 | 29.93 |
| Bra012244.1-P | Field mustard | nucleus, plastid | 18.54 | 28.28 |
| TraesCS3B01G270900.1 | Wheat | nucleus | 41.72 | 26.25 |
| Bra002073.1-P | Field mustard | nucleus | 26.49 | 25.48 |
| Bra009681.1-P | Field mustard | nucleus | 25.17 | 23.9 |
| Bra012832.1-P | Field mustard | nucleus | 21.19 | 20.13 |
| Bra017723.1-P | Field mustard | nucleus, plastid | 27.81 | 19.81 |
| Bra026498.1-P | Field mustard | nucleus | 31.79 | 19.51 |
| Bra029371.1-P | Field mustard | nucleus | 30.46 | 18.93 |
| Bra037266.1-P | Field mustard | endoplasmic reticulum, vacuole | 25.83 | 16.25 |
Protein Annotations
| Gene3D:1.10.30.10 | MapMan:35.1 | EnsemblPlantsGene:Bra021911 | EnsemblPlants:Bra021911.1 | EnsemblPlants:Bra021911.1-P | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | InterPro:HMG_box_dom | InterPro:HMG_box_dom_sf | InterPro:IPR009071 | InterPro:IPR036910 | UniProt:M4DZG4 |
| PFAM:PF00505 | PFscan:PS50118 | PANTHER:PTHR13711 | PANTHER:PTHR13711:SF200 | SMART:SM00398 | SUPFAM:SSF47095 |
| UniParc:UPI00025438C7 | SEG:seg | : | : | : | : |
Description
AT2G34450 (E=1e-045) | high mobility group (HMG1/2) family protein
Coordinates
chrA04:-:15162713..15164072
Molecular Weight (calculated)
17622.9 Da
IEP (calculated)
10.088
GRAVY (calculated)
-1.270
Length
151 amino acids
Sequence
(BLAST)
(BLAST)
001: MTKKGLKSPS YGGGGSARNL ELVGKSSEDV RSSTRLRLKP LRKPKTSQKK KNKKADKLHG KMPKKPPTAF FFFLEDFRKL YQEENPEVKS MREIGKTCGE
101: KWKTMTYEEK VKYYDIATEK REEFHRAMTE YTKRVESGEF DESETESDFS E
101: KWKTMTYEEK VKYYDIATEK REEFHRAMTE YTKRVESGEF DESETESDFS E
001: MTKRAPKSGP LSPSCSGGSS RNLELAVKSS EGARRSTRLR LQPLRKPKTS PKKKPVKLQT KMPKKPATAF FFFLDDFRKQ YQEENPDVKS MREIGKTCGE
101: KWKTMTYEEK VKYYDIATEK REEFHRAMTE YTKRMESGAH DESETDSDYS E
101: KWKTMTYEEK VKYYDIATEK REEFHRAMTE YTKRMESGAH DESETDSDYS E
Arabidopsis Description
HMG-box (high mobility group) DNA-binding family protein [Source:TAIR;Acc:AT2G34450]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.