Factsheet for Os01t0934400-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 2
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
TargetP:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0934300-02
Os01t0934400-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G02560.1	Os01t0934300-02	AT4G02560.1	17138694
AT4G02560.1	Os01t0934400-01	AT4G02560.1	17138694

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g074700.1.1	Tomato	nucleus	4.44	13.56
Solyc09g074710.2.1	Tomato	nucleus	5.56	5.43
Solyc09g074730.1.1	Tomato	mitochondrion	5.56	4.83
GSMUA_Achr11P...	Banana	nucleus	14.44	3.65
Bra018540.1-P	Field mustard	nucleus	15.56	3.44
VIT_07s0104g01580.t01	Wine grape	nucleus	20.56	3.43
KRH68148	Soybean	nucleus	19.44	3.42
CDX97277	Canola	nucleus	16.67	3.36
CDX91289	Canola	nucleus	16.11	3.24
Os01t0934300-02	Rice	nucleus	17.78	3.24
KRG96407	Soybean	nucleus	18.33	3.22
GSMUA_Achr1P11230_001	Banana	nucleus	16.11	3.0
AT4G02560.1	Thale cress	nucleus	15.56	2.94
GSMUA_Achr11P...	Banana	plastid	3.33	2.11
Solyc09g074720.1.1	Tomato	nucleus	2.78	2.09
Solyc09g074690.2.1	Tomato	nucleus	3.33	1.95

Protein Annotations

Gene3D:3.40.1000.10	MapMan:35.1	ProteinID:BAF07225.1	ProteinID:BAS76073.1	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0008150	GO:GO:0008152
GO:GO:0009523	GO:GO:0009579	GO:GO:0009654	GO:GO:0009987	GO:GO:0015979	GO:GO:0016020
GO:GO:0019898	InterPro:IPR016123	InterPro:Mog1/PsbP_a/b/a-sand	EnsemblPlantsGene:Os01g0934400	EnsemblPlants:Os01t0934400-01	PFAM:PF01789
PANTHER:PTHR31407	PANTHER:PTHR31407:SF16	InterPro:PsbP	UniProt:Q0JGA3	SUPFAM:SSF55724	UniParc:UPI0000DD8EA0

Description

Mog1/PsbP, alpha/beta/alpha sandwich domain containing protein. (Os01t0934400-01)

Coordinates

chr1:+:40996336..40997308

Molecular Weight (calculated)

19664.4 Da

IEP (calculated)

9.441

GRAVY (calculated)

-0.297

Length

180 amino acids

Sequence
(BLAST)

001: EFIYPASWVG DQTLLYRGAK RAELQRSLDP PPLANGRSPS RPRNISEPVA AFGPPGSSGE LNVSVIVSPV PQDFSIEAFG GPKDVGEVVL RRIAKTKRGA
101: DINATLLDAA LREDPANNVK YYKLEFRVES PSFRRRNVAV CCAKDGKLYT LNAQAPESAW KAVRKEFLAM ADSFSLVADV

Best Arabidopsis Sequence Match ( AT3G05410.2 )
(BLAST)

001: MSLKPYFSLL YSSPTNVKLS NFLIAQQPSG DLKTTPAEEF SPLVEKFNRR LLLGVGSSSV LAIGANFGGT TSFILGLSPG IGRNLKLDVI YPIGGYSRCI
101: DTVEGFEFIY PATWVGDQTL LYRAAEKSER ENSLDLPPAR NSRRKNVNEP VVAFGPPGST GELNVSVIVS PVSPSFSIEA FGGPKEVGEA IVRTVTGSGQ
201: RADLKGTLLE SSIRQDSERN LKYYELEFKV ESPLFRRHNV AVCCAHSGRL YTLNAQAPES AWSEVKSEIY TTAKSFNIIS

Arabidopsis Description

PPD7PsbP domain-containing protein 7, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:F4J7A7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.