Skip to main content
crop-pal logo
Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 7
  • cytosol 1
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU2Hr1G035200.1 Barley plastid 43.67 72.94
Zm00001d006732_P001 Maize plastid 71.3 71.19
TraesCS2D01G193600.1 Wheat plastid 70.68 70.25
TraesCS2B01G212600.1 Wheat plastid 71.3 70.21
KXG36592 Sorghum plastid 71.14 69.85
TraesCS2A01G194300.1 Wheat plastid 70.37 69.72
GSMUA_Achr4P10950_001 Banana cytosol, mitochondrion, nucleus 32.56 36.07
GSMUA_Achr4P03420_001 Banana cytosol 31.79 34.8
Bra001755.1-P Field mustard nucleus 24.38 26.42
Os01t0108800-01 Rice cytosol 9.26 25.97
PGSC0003DMT400008388 Potato cytosol 25.62 25.34
PGSC0003DMT400066158 Potato nucleus 25.46 25.27
CDY22966 Canola endoplasmic reticulum 24.38 25.08
AT3G19610.1 Thale cress vacuole 24.69 25.0
Solyc01g107120.2.1 Tomato cytosol 25.0 24.96
CDX82287 Canola endoplasmic reticulum 24.23 24.96
Solyc10g049800.1.1 Tomato cytosol 15.74 24.94
Os03t0181800-01 Rice cytosol 19.44 21.99
Os08t0541500-01 Rice mitochondrion, peroxisome, plastid 24.54 21.69
Os09t0516700-01 Rice cytosol, extracellular, nucleus 15.43 21.6
Os11t0120200-01 Rice cytosol, mitochondrion, nucleus 21.3 19.49
Os12t0120000-01 Rice cytosol, mitochondrion, nucleus 21.14 19.35
Protein Annotations
EnsemblPlants:Os07t0588300-00EnsemblPlantsGene:Os07g0588300EntrezGene:4343761InterPro:DUF936_plnPANTHER:PTHR31928PANTHER:PTHR31928:SF5
PFAM:PF06075ProteinID:BAC83261.1ProteinID:BAD30931.1ProteinID:BAT02414.1ProteinID:EAZ40482.1RefSeq:XP_015646042.1
SEG:segUniParc:UPI00001BF276UniProt:Q6ZIP2MapMan:20.1.5.4.2::
Description
Hypothetical conserved gene. (Os07t0588300-00)
Coordinates
chr7:+:23953405..23955773
Molecular Weight (calculated)
70548.1 Da
IEP (calculated)
8.835
GRAVY (calculated)
-0.545
Length
648 amino acids
Sequence
(BLAST)
001: MPPVSSSTSR PASLPSSPHR PALRPGSLQR LLRPPDPSDD DGAAPTAPRS SRGGGRVLLQ VTNITPALSG ANPFSGHHGF YLRLSDSARS CYVSLHADHD
101: DLILTNGLHI GQVIEVEHLV PSVPAPVLRH FRVLPGRYPC IQQEPADDAA AGGAAAEIKE VVSERPRRSS PTPPIPGERR ARQAGGGGSP SSISYRHRSR
201: SISNLSEAGA AARRSGAAVL GKLRKVSVTS IDGTSTDDDD EESDVSSLSS ARRNWDFTGG VKDRRPVAPR RRGNSVSPSK SGPNSTITQN DDPMESVRRK
301: AEKAFNVLSK RASAKMTRES SNCTVATPQS AAASSSIKWC ESNVMWSTLS SSLLKHGKEA VKQRDMALQA VLDGLLEAST TEKLIKCLST YSELQSDKEE
401: NPKELIDRFL KFSQELDHAI FIAQSQTKIR HVKACGSNST SSASTKAALK AALDRKQSAI LWIREAIEAD LSPFSSHTRP TESPKLSLAE SKPMTPLFCC
501: SKPKCNCSKR SSRKASDGSS QGSNMSAAMD LAVALRSECN CWFLKYIDKF LDDIESETMY APCDSQVAGL LQQLKRVDDW LNRVALHERM LSVDRTNKDI
601: MFSEEEESDA CERVRRKIYG ALLRHVQYAA MALEGLNGVI DEEKDERK
Best Arabidopsis Sequence Match ( AT1G08760.1 )
(BLAST)
001: MANLVPGVLL KLLQHMNTDV KIAGEHRSSL LQVISIVPAL AGGELFPNQG FYLKVSDSSH ATYVSLPDEH DDLILSDKIQ LGQYIHVDRV ESSSPVPILR
101: GVRPVPGRHP CVGDPEDIVA THSLGFLSDD KVKNDNNGGV SSKPKERVKA SVKANGSGSD GERIIGNRLS VSISRDDSSD GKKPVSALFR AKSAKSSLSL
201: DVKKESLGKL KTSSGSKSIP SSPTSCYSLP NSFAKFANGI KQQQTVKPKL LEKGSPRMGL SEKGRSLLKA ESPKVGKKLP MIKNFVQGIE FGAKALRKSW
301: EGNLDIRGSD RTKSSLPRRD LTPDSRSLAA PRRSTSSEKL PSKQERANVF ARSSKEHNKI QSTKKVEPTA VLDTKDKTSR PKSTSVEKKS VAENGLPGNL
401: VKVSVNGKRL AAANIQWSSL PPSLSRMGQE VLRHREAAQV VAIEALQEAS ASESLLQCLI MYSDLLSTAK EDDPLPVVEQ FLKLHSGLKN VQVITESLSK
501: LLSLMSSPDN EENRSEEAIK AASEKQKLAA SWVQAALVTN LSPFSVYSSK QAKLAASRSK PVIILESPGN NSSSKTRGNI QNKPTIGSKL VAQGMIRKHR
601: ENSSSQKATS VAGSESPPLN WVKGNGLNEA TDLAEKLQMV SQDWFLGFVE RFLDADVITS SSLSLSDNGQ IAGMLSQLKS VNDWLDEIGS KEDEEGLQEV
701: SKETIDRLRK KIYEYLLTHV ESAAAALGGG GGSVSSPRPK PIETKAKR
Arabidopsis Description
At1g08760 [Source:UniProtKB/TrEMBL;Acc:Q9FRR2]
SUBAcon: [plastid,vacuole,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.