Factsheet for Os12t0120000-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os11t0120200-01	Rice	cytosol, mitochondrion, nucleus	97.88	97.88
TraesCS4B01G123300.1	Wheat	mitochondrion	77.97	78.63
TraesCS4A01G192100.1	Wheat	mitochondrion	78.11	78.11
HORVU4Hr1G024210.1	Barley	mitochondrion	77.26	76.93
TraesCS4D01G121400.1	Wheat	mitochondrion	77.68	76.18
EES09151	Sorghum	cytosol, mitochondrion, plastid	75.0	73.34
HORVU4Hr1G024120.1	Barley	plastid	77.26	72.16
Zm00001d052368_P001	Maize	cytosol, mitochondrion, plastid	72.18	69.9
GSMUA_Achr7P21900_001	Banana	mitochondrion	51.13	52.62
GSMUA_Achr4P10330_001	Banana	mitochondrion	51.98	50.48
AT4G13370.1	Thale cress	endoplasmic reticulum, mitochondrion	43.36	45.62
CDY69222	Canola	mitochondrion, plastid	27.26	45.52
CDY01127	Canola	mitochondrion	39.83	44.76
PGSC0003DMT400001026	Potato	mitochondrion	43.36	44.62
Bra032701.1-P	Field mustard	mitochondrion	39.55	44.44
Bra034878.1-P	Field mustard	mitochondrion	40.96	44.41
VIT_11s0016g04380.t01	Wine grape	plastid	44.49	44.37
Solyc12g007020.1.1	Tomato	mitochondrion	42.51	43.94
CDY64935	Canola	mitochondrion	40.54	43.88
CDY43695	Canola	mitochondrion	40.96	43.67
KRH03797	Soybean	mitochondrion	43.36	43.61
KRH56681	Soybean	vacuole	43.5	37.47
Os01t0108800-01	Rice	cytosol	10.17	31.17
Os09t0516700-01	Rice	cytosol, extracellular, nucleus	17.66	27.0
Os08t0541500-01	Rice	mitochondrion, peroxisome, plastid	24.86	24.01
Os03t0181800-01	Rice	cytosol	18.08	22.34
Os07t0588300-00	Rice	plastid	19.35	21.14

Protein Annotations

EMBL:AK105399	EnsemblPlants:Os12t0120000-01	EnsemblPlantsGene:Os12g0120000	EntrezGene:4351351	InterPro:DUF936_pln	PANTHER:PTHR31928
PANTHER:PTHR31928:SF3	PFAM:PF06075	ProteinID:ABA95670.1	ProteinID:BAF29035.1	ProteinID:BAT15643.1	RefSeq:XP_015618930.1
SEG:seg	UniParc:UPI0000681B4B	UniProt:Q2QYH0	MapMan:20.1.5.4.2	:	:

Description

Protein of unknown function DUF936, plant family protein. (Os12t0120000-01)

Coordinates

chr12:-:947150..950199

Molecular Weight (calculated)

75282.6 Da

IEP (calculated)

10.534

GRAVY (calculated)

-0.356

Length

708 amino acids

Sequence
(BLAST)

001: MATVTPGVLL KLLQAMHTDD RVAGDHRSPV LQVTAVVPAL TASTADSLWP SNGFLLQLSD GLHSTYVQPS SADADALVSA RPQLVGHLVH LDRLRFARPV
101: PRAVGIRPVP SSRSVSFVGN PEPLVARPAA CSRGYVIQPG SHSDAAPPLM PSSSGNAAQS DATNAINRTV LAHKNVPEAA PPPAVSAAKR RFSSPAPSKQ
201: RDPSPSVKGG ASRPSSPSVK GASRASSPAV RGTPRATSPA PSKCVVPSLV AAKEENRRTA REPAIIVPSR YRQPSPVGGR RGAGSPAPGG RRASLSPSSR
301: RLSGEGSSKK KVGVLVAGIS KMTDLTNGSA VKPGRKSWDN TSIAAAAGSV MKSKVKVDKS TILRTQEAMA RRLSDVTTEL SSNDDDSSVD EKPKPRKKIE
401: SPAVKTKAMA PKIMLHDPKW TDGSIPLDGV SDVLSKMGKE ATERRDAAAI AAADALQEAL ITESVIRNLS KFSELTSASK TSNPLPTVDI FLAVYEDTLK
501: WKKIAESIST NRTETASWEN SVTHWVEAAL ATDLEVLKLM NKAPESLSRK RGADKPKAPL VVEAPRTTIS KRQSHGTSAK VQSKVLPTSS ASCAWNKTQG
601: VNETAELATT LCCEMHTWFL KFVDEAMDLG FHLFEDQNVA SRGKQSSHIT MVLSQFKKIS DWLDGVGKIA EEATTKDKVE QLKCKIYGFV INHMGSAFDS
701: SVSISSRN

Best Arabidopsis Sequence Match ( AT4G13370.1 )
(BLAST)

001: MASLAPGILL KLLQCMNSGT RPTGDHRSAI LQVTGIVPAL AGSDLWPNQG FYVQISDSLN STYVSLSERD TDLILSNRLQ LGQFIYLERL EFATPVPRAA
101: GIRPVAGRHA FVGKPEPLIA RVSNGSKRDF VIQPVSDSEY SLDPIAVYLN NRRIDDDGDS DVKPNVRQAL APVNQNEENR NQIRNQKPKT TPQRFSSPAS
201: SKRSVSSGKK NCSGAVAVTV ERDPSPVVSG KGRRSASPVP SKCVVPSLAA AREENRKVAR EPSIVVPSRY RQPSPNGRKM NPSPSGRRMS ISPGRRLSSG
301: LKMTPMVGDS SGKKKMAVIA AGISKVSEAL VGSSAKNGNR KNWEEPLAGD GSAKNKPDHQ AILRTQAAMT RRLSDANRRK SGSSSSVCEE KAKSCSSESS
401: LLEEVSAFEG LGITYHERKW TDGSVPLDSI SDELAKLGKE AMKRRDFAAK AAARALEEAN ANECIIRCLS KFSELSSASK VGNPLRIINE FLKIYEDVMK
501: YSKIASENSF SLSSDQQNPI SLWVEAALAT NLEVVSLVKS HESPSSLKKS MPTRLSPRPS SKTDNIVGMW TDLDGLKETA KFAVNLQSEM QVWFIEFVEE
601: SLDNKNAAKR SLDGSSIAAV LSQLKQVNEW LDRVSSNQEN KITTMDKIER LKRKIYGFVI HHVGSTYDNS ASS

Arabidopsis Description

At4g13370 [Source:UniProtKB/TrEMBL;Acc:Q9T0K8]
SUBAcon: [mitochondrion,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.