CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 7
plasma membrane 5
golgi 6
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH03797	Soybean	mitochondrion	80.9	94.46
VIT_11s0016g04380.t01	Wine grape	plastid	56.2	65.07
CDY69222	Canola	mitochondrion, plastid	31.39	60.85
PGSC0003DMT400001026	Potato	mitochondrion	50.12	59.88
Solyc12g007020.1.1	Tomato	mitochondrion	49.76	59.71
Bra032701.1-P	Field mustard	mitochondrion	44.53	58.1
Bra034878.1-P	Field mustard	mitochondrion	46.11	58.04
AT4G13370.1	Thale cress	endoplasmic reticulum, mitochondrion	47.45	57.95
CDY01127	Canola	mitochondrion	44.28	57.78
CDY64935	Canola	mitochondrion	45.38	57.03
CDY43695	Canola	mitochondrion	45.62	56.48
GSMUA_Achr7P21900_001	Banana	mitochondrion	40.63	48.55
GSMUA_Achr4P10330_001	Banana	mitochondrion	42.94	48.42
TraesCS4B01G123300.1	Wheat	mitochondrion	38.44	45.01
TraesCS4A01G192100.1	Wheat	mitochondrion	38.2	44.35
HORVU4Hr1G024210.1	Barley	mitochondrion	38.08	44.02
Os12t0120000-01	Rice	cytosol, mitochondrion, nucleus	37.47	43.5
Os11t0120200-01	Rice	cytosol, mitochondrion, nucleus	37.47	43.5
TraesCS4D01G121400.1	Wheat	mitochondrion	37.96	43.21
EES09151	Sorghum	cytosol, mitochondrion, plastid	37.23	42.27
Zm00001d052368_P001	Maize	cytosol, mitochondrion, plastid	36.86	41.45
HORVU4Hr1G024120.1	Barley	plastid	38.2	41.42
KRG89920	Soybean	extracellular, mitochondrion	8.76	38.92
KRH47653	Soybean	endoplasmic reticulum, nucleus, peroxisome	18.86	28.97
KRH06232	Soybean	nucleus	18.37	28.28
KRH69022	Soybean	golgi, mitochondrion	18.61	28.23
KRH24591	Soybean	nucleus	23.36	25.88
KRH29601	Soybean	nucleus	23.24	25.74
KRH23226	Soybean	nucleus	23.48	25.6
KRH10106	Soybean	nucleus	23.72	25.32
KRH74610	Soybean	cytosol, extracellular, mitochondrion, nucleus	17.27	24.15
KRH43579	Soybean	plastid	16.55	23.9
KRH13842	Soybean	plastid	16.3	23.76
KRH69557	Soybean	extracellular, mitochondrion, nucleus, vacuole	16.18	23.21

Protein Annotations

KEGG:00500+3.2.1.39	EntrezGene:100813278	MapMan:20.1.5.4.2	Gene3D:3.20.20.80	EMBL:ACUP02002796	ncoils:Coil
InterPro:DUF936_pln	EnsemblPlantsGene:GLYMA_05G012600	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Glyco_hydro_17	InterPro:Glycoside_hydrolase_SF	UniProt:K7KNH9
EnsemblPlants:KRH56681	ProteinID:KRH56681	ProteinID:KRH56681.1	PFAM:PF00332	PFAM:PF06075	PFscan:PS51257
PANTHER:PTHR31928	PANTHER:PTHR31928:SF3	SUPFAM:SSF51445	SignalP:SignalP-TM	TMHMM:TMhelix	UniParc:UPI000296F13E
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:-:1179515..1184858

Molecular Weight (calculated)

89171.6 Da

IEP (calculated)

9.994

GRAVY (calculated)

-0.319

Length

822 amino acids

Sequence
(BLAST)

001: MAQEKALRVR YLVAFLLVFF TMASCGSGVG VNWGTMATHK LPPNKVVKML QENGFDKLKL FDAEEWIMAA LMGTDIEVML AIPNNMLEEM SRNPQVADSW
101: VYENVTSYMY PGGLNIKAIA TMASLTPGIL LKMLQAMNTN TRVTGDHRSP LLQVIGIVPA LAGSDLWSNQ GFYLNLSDSV NSTYVLLSHP DTDLILSNRL
201: QLGQFVHVDR FHFDSPLPSV SNLRPLAGRH PFLGTPEPLI ARISPSTRHF LIQPLSDSEL DPLSLLSLNN NNKSPIPNPN PNPNHNHEEH KQHHKDSSKE
301: RISRDPLAPR DNNLPPQRFS SPATAKRSQS AGRNKIVSTT AERDPSPAGK GKRSASPVPS KCVVPSLVSA REENRKVSRE PAIIVPSRYR QPSPTGRKQP
401: SSSPRRTSLS PGRRLSGGLK VSPLVADSSV KKKMATIVAG ISKVSDALVG SKSARKNWDE QLPATPVEAG GSKSKVDAQA ILRTQAAMSR RLSDVSGQKP
501: GSNDSSSNEK TKAVSPQSCV LEDKSNFAAM GITIHEKKWT DGSVPLDAVS GNLARLGKEA MQRKILASTA AAEALEEANA TECIIRNLSM FSDLCSVCQA
601: RNPLPTIDRF FTIYDDVLKS TAMVESVASR HNSETPDEGI PTKHSKSLSF WVEAALATDL QIVSLLTGTT VDPPSTLQKS LSKRQSLGAA KNLKVRSSPQ
701: SSLSTGVWTG GSGMKETVEL GANLLSEMQM WFLRFVEESL DAGFKVFGEC TADGKKALPL DGGSIAVVLS HLKRVNAWLD RVVSKGDDSL TEKIEKLKRK
801: IYGFVIQHVG TTFDSSASSA SS

Best Arabidopsis Sequence Match ( AT4G13370.1 )
(BLAST)

001: MASLAPGILL KLLQCMNSGT RPTGDHRSAI LQVTGIVPAL AGSDLWPNQG FYVQISDSLN STYVSLSERD TDLILSNRLQ LGQFIYLERL EFATPVPRAA
101: GIRPVAGRHA FVGKPEPLIA RVSNGSKRDF VIQPVSDSEY SLDPIAVYLN NRRIDDDGDS DVKPNVRQAL APVNQNEENR NQIRNQKPKT TPQRFSSPAS
201: SKRSVSSGKK NCSGAVAVTV ERDPSPVVSG KGRRSASPVP SKCVVPSLAA AREENRKVAR EPSIVVPSRY RQPSPNGRKM NPSPSGRRMS ISPGRRLSSG
301: LKMTPMVGDS SGKKKMAVIA AGISKVSEAL VGSSAKNGNR KNWEEPLAGD GSAKNKPDHQ AILRTQAAMT RRLSDANRRK SGSSSSVCEE KAKSCSSESS
401: LLEEVSAFEG LGITYHERKW TDGSVPLDSI SDELAKLGKE AMKRRDFAAK AAARALEEAN ANECIIRCLS KFSELSSASK VGNPLRIINE FLKIYEDVMK
501: YSKIASENSF SLSSDQQNPI SLWVEAALAT NLEVVSLVKS HESPSSLKKS MPTRLSPRPS SKTDNIVGMW TDLDGLKETA KFAVNLQSEM QVWFIEFVEE
601: SLDNKNAAKR SLDGSSIAAV LSQLKQVNEW LDRVSSNQEN KITTMDKIER LKRKIYGFVI HHVGSTYDNS ASS

Arabidopsis Description

At4g13370 [Source:UniProtKB/TrEMBL;Acc:Q9T0K8]
SUBAcon: [mitochondrion,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.