CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH10106	Soybean	nucleus	94.56	92.6
KRH29601	Soybean	nucleus	73.21	74.39
KRH24591	Soybean	nucleus	72.28	73.45
CDX91320	Canola	extracellular	9.28	70.0
VIT_05s0102g01200.t01	Wine grape	endoplasmic reticulum, extracellular, nucleus	63.93	65.22
Solyc06g073110.2.1	Tomato	endoplasmic reticulum, extracellular, nucleus	58.89	59.44
CDY08643	Canola	mitochondrion, nucleus	9.28	56.91
Bra031640.1-P	Field mustard	cytosol, nucleus, peroxisome	51.59	56.21
AT1G08760.1	Thale cress	cytosol, plastid, vacuole	54.38	54.81
Bra018603.1-P	Field mustard	cytosol, nucleus, vacuole	53.18	54.48
KRG89920	Soybean	extracellular, mitochondrion	12.73	51.89
CDY69908	Canola	plastid	8.09	51.69
GSMUA_Achr11P...	Banana	cytosol, extracellular, nucleus	28.65	51.55
GSMUA_Achr5P25710_001	Banana	cytosol, plasma membrane, plastid	46.02	47.08
GSMUA_Achr3P21570_001	Banana	extracellular, peroxisome, plastid	45.76	46.5
Os09t0516700-01	Rice	cytosol, extracellular, nucleus	27.85	45.36
EES14150	Sorghum	cytosol, plasma membrane, plastid	44.3	44.95
Zm00001d031700_P003	Maize	cytosol, mitochondrion, plastid	44.16	44.64
EER99187	Sorghum	cytosol, mitochondrion, nucleus	43.9	44.55
TraesCS7D01G268500.2	Wheat	cytosol, mitochondrion, nucleus	43.1	44.34
GSMUA_Achr11P...	Banana	plastid	41.51	44.33
Os08t0541500-01	Rice	mitochondrion, peroxisome, plastid	42.97	44.2
TraesCS7B01G166200.1	Wheat	cytosol, mitochondrion, plastid	42.84	44.07
Zm00001d021181_P005	Maize	cytosol, mitochondrion, nucleus	43.37	43.95
TraesCS7A01G266300.1	Wheat	cytosol, mitochondrion, plastid	42.71	43.81
TraesCS5D01G309900.1	Wheat	cytosol, mitochondrion, plastid	42.57	42.91
GSMUA_Achr11P...	Banana	cytosol, nucleus, plastid	17.37	42.81
HORVU5Hr1G079460.1	Barley	cytosol, mitochondrion, plastid	42.57	42.69
Zm00001d006130_P001	Maize	mitochondrion, plastid	42.97	42.58
TraesCS5A01G303100.1	Wheat	cytosol, mitochondrion, plastid	42.31	42.48
TraesCS5B01G303400.1	Wheat	cytosol, mitochondrion, plastid	42.31	42.48
KRH06232	Soybean	nucleus	24.54	34.64
KRH47653	Soybean	endoplasmic reticulum, nucleus, peroxisome	24.14	34.02
KRH69022	Soybean	golgi, mitochondrion	23.74	33.03
KRH13842	Soybean	plastid	22.68	30.32
KRH43579	Soybean	plastid	22.68	30.05
GSMUA_Achr9P08220_001	Banana	mitochondrion	42.04	29.52
TraesCS4A01G231900.1	Wheat	nucleus, plastid	16.98	28.64
HORVU4Hr1G014370.1	Barley	nucleus, plastid	17.37	28.11
TraesCS4D01G082000.1	Wheat	nucleus, plastid	17.37	27.99
KRH03797	Soybean	mitochondrion	26.13	27.98
TraesCS4B01G084100.1	Wheat	nucleus, plastid	17.24	27.96
KRH74610	Soybean	cytosol, extracellular, mitochondrion, nucleus	21.09	27.04
KXG28276	Sorghum	plastid	17.51	26.77
KRH69557	Soybean	extracellular, mitochondrion, nucleus, vacuole	20.29	26.7
KRH56681	Soybean	vacuole	25.6	23.48

Protein Annotations

EMBL:ACUP02008458	EnsemblPlants:KRH23226	EnsemblPlantsGene:GLYMA_13G345500	EntrezGene:100817734	InterPro:DUF936_pln	PFAM:PF06075
ProteinID:KRH23225.1	ProteinID:KRH23226	ProteinID:KRH23226.1	SEG:seg	UniParc:UPI00023CEB4C	UniProt:I1M575
MapMan:20.1.5.4.2	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr13:-:43610483..43615746

Molecular Weight (calculated)

81234.1 Da

IEP (calculated)

10.133

GRAVY (calculated)

-0.536

Length

754 amino acids

Sequence
(BLAST)

001: MANLVPGVLL KLLQHMNSDV KVGGEHRSSL LQVVSIVPAL AAGGELFPNQ GFYLKVSDSS HATYVSLPDE HDDLILSDKI QLGQFVFVDR LEGASPVPIL
101: RGVRPVPGRH PCVGTPEDIV ATHSLAFLDN GNDKNGACSG GGDVDRSKSP RKVFGGGVGE KEKKERVRSI VVGGGGSGKE DVQSSKASAV FGRSKSQPQQ
201: PQPIKPALKI QVKKESLARL KSTNSRSIPS SPSSCYSLPS SFEKFANGVR QHQGKVGAKV GVAETEKAVR GASSLVGKKI VVGNPIRNLV QGIELGTKAL
301: RKSWEGSMEV KTKESSKTRV ATKFDSKPEA STPRRRSIST EKFLSKEESR IQAPTKPSKE QHKIQTPTKK ANANGIVEEP EKSSKLRTSI GKKSAEVSNS
401: GLPGNLVKVS LSNRKVTDAS VQWASLPSSI SKIGREVMKH RDAAQIAATE AMQEAAAAES LLQCLRTYSE LTNSAKEHNP QPAVEQFLTL HASLNSTRTI
501: AESLSKPIPD GSSPDYERST VEEALKVKSD RQKQSASWVQ AALATNLSSF AVFTRESQSS KLPASSNSQN QKTVVGSQNM LVLHNSSEDA SSKVHAKTRL
601: TANSKHSSQG TLRKPGDGLL NGQKQLVQLP PEWVRGNGLN EVVNLAEMLQ LESRDWFLGF VERFLDSDGD TTLSDNDQIA GMLTQLKSVN DWLDEIGSSK
701: DEGESCQIST ETIDRLRKKI YEYLLTHVES AAAALSGGSQ SSPQIQTTQS KAKR

Best Arabidopsis Sequence Match ( AT1G70340.1 )
(BLAST)

001: MAALAPGILQ KLIQGMKTGI KPTREHRSSM LQVTDIVPID LDEKSLEPKQ GFLIKISDSS HSIYVSLPSD QDDVVLSNKL QLGQFIYVDR LEPGSPVPVI
101: KGAKPIPGRH PLLGTPETLV VPKERTDQEI GSKPRRGSWG QNVDFSSSPF VVKPMALEFD HSTPAKRSVS ARFAASPIRR GGVRCSFGGG VLGKLEGESP
201: ATAMLRKSCF VSSASKFPRS RSVCDRQAKK NNASLFSPFK SSLEAQEDVV PLSTSKKIKP EKDTNLSGRL NILSKEATQL REVAQKVALQ ALREATITEI
301: VVRHTKTFTN LSKSAKADCP AVCFEKFMEF HQQMAQTIGE LTSIEVAATP DAENKSQNIN ARTENQKPTE EGSSSILHEI AYNSIDQEKR RSKRRIVLKQ
401: QSEGKTVRSN DENKNPASGG ISNTIRLAKE IEDEAANWFM EFIEIALEKG MKKSRGPDDA DVKKVPQSLI LGVLNWIEVE QSDSNNNKRR RVHPKASKIT
501: RKLRIKLKNP

Arabidopsis Description

At1g70340 [Source:UniProtKB/TrEMBL;Acc:O64602]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.