CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 4
extracellular 3
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	extracellular
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX91320	Canola	extracellular	73.73	87.0
CDY05811	Canola	cytosol	35.59	32.56
CDY08643	Canola	mitochondrion, nucleus	33.9	32.52
GSMUA_Achr11P...	Banana	cytosol, extracellular, nucleus	43.22	12.17
CDY06329	Canola	extracellular, nucleus, peroxisome	61.02	11.52
CDY22665	Canola	extracellular, nucleus, peroxisome	58.47	10.99
CDX93540	Canola	extracellular, nucleus, vacuole	66.1	10.6
Os09t0516700-01	Rice	cytosol, extracellular, nucleus	40.68	10.37
CDX95036	Canola	extracellular, nucleus, vacuole	59.32	9.52
VIT_05s0102g01200.t01	Wine grape	endoplasmic reticulum, extracellular, nucleus	54.24	8.66
KRH24591	Soybean	nucleus	51.69	8.22
KRH23226	Soybean	nucleus	51.69	8.09
KRH29601	Soybean	nucleus	50.85	8.09
KRH10106	Soybean	nucleus	52.54	8.05
Solyc06g073110.2.1	Tomato	endoplasmic reticulum, extracellular, nucleus	50.85	8.03
CDY69222	Canola	mitochondrion, plastid	27.97	7.78
GSMUA_Achr11P...	Banana	plastid	42.37	7.08
GSMUA_Achr5P25710_001	Banana	cytosol, plasma membrane, plastid	44.07	7.06
GSMUA_Achr3P21570_001	Banana	extracellular, peroxisome, plastid	43.22	6.87
EER99187	Sorghum	cytosol, mitochondrion, nucleus	43.22	6.86
TraesCS5A01G303100.1	Wheat	cytosol, mitochondrion, plastid	43.22	6.79
EES14150	Sorghum	cytosol, plasma membrane, plastid	42.37	6.73
Zm00001d021181_P005	Maize	cytosol, mitochondrion, nucleus	42.37	6.72
Zm00001d031700_P003	Maize	cytosol, mitochondrion, plastid	42.37	6.7
Os08t0541500-01	Rice	mitochondrion, peroxisome, plastid	41.53	6.68
TraesCS5D01G309900.1	Wheat	cytosol, mitochondrion, plastid	42.37	6.68
TraesCS5B01G303400.1	Wheat	cytosol, mitochondrion, plastid	42.37	6.66
HORVU5Hr1G079460.1	Barley	cytosol, mitochondrion, plastid	42.37	6.65
TraesCS7D01G268500.2	Wheat	cytosol, mitochondrion, nucleus	39.83	6.41
TraesCS7B01G166200.1	Wheat	cytosol, mitochondrion, plastid	38.98	6.28
TraesCS7A01G266300.1	Wheat	cytosol, mitochondrion, plastid	38.98	6.26
Zm00001d006130_P001	Maize	mitochondrion, plastid	39.83	6.18
CDY52268	Canola	mitochondrion	26.27	6.11
CDY61547	Canola	nucleus	26.27	6.08
CDX97548	Canola	mitochondrion	25.42	5.92
CDY47633	Canola	nucleus	25.42	5.79
CDX82287	Canola	endoplasmic reticulum	28.81	5.41
CDY22966	Canola	endoplasmic reticulum	28.81	5.4
CDY57317	Canola	nucleus	24.58	5.29
CDX91723	Canola	nucleus	23.73	5.24
CDY64935	Canola	mitochondrion	28.81	5.2
GSMUA_Achr9P08220_001	Banana	mitochondrion	44.07	4.84
CDY43695	Canola	mitochondrion	27.12	4.82
CDY01127	Canola	mitochondrion	22.88	4.29
CDY60513	Canola	plastid	18.64	4.06
CDY42075	Canola	plastid	18.64	4.02
KXG28276	Sorghum	plastid	11.02	2.64
HORVU4Hr1G014370.1	Barley	nucleus, plastid	9.32	2.36
TraesCS4D01G082000.1	Wheat	nucleus, plastid	9.32	2.35
TraesCS4B01G084100.1	Wheat	nucleus, plastid	8.47	2.15
TraesCS4A01G231900.1	Wheat	nucleus, plastid	7.63	2.01
GSMUA_Achr11P...	Banana	cytosol, nucleus, plastid	1.69	0.65

Protein Annotations

EnsemblPlants:CDY69908	EnsemblPlantsGene:GSBRNA2T00093405001	InterPro:DUF936_pln	PANTHER:PTHR31928	PANTHER:PTHR31928:SF4	PFAM:PF06075
ProteinID:CDY69908	ProteinID:CDY69908.1	SEG:seg	UniParc:UPI0004EE5B42	UniProt:A0A078JQP9	MapMan:35.2

Description

BnaUnng03500DBnaUnng03500D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JQP9]

Coordinates

chrLK040665:-:1775..2347

Molecular Weight (calculated)

12950.7 Da

IEP (calculated)

8.848

GRAVY (calculated)

-0.165

Length

118 amino acids

Sequence
(BLAST)

001: MANLVPGNTC PLSYKSLASS LLLAGGELFP NQGFYLKVSD ASHTTYVSLP DEHDDLILSD KLHLERGRSP LGMESPTVGK KLPMNKSFVH GIEFGAKALR
101: KLGREHSKVL TCRFLYSC

Best Arabidopsis Sequence Match ( AT1G08760.1 )
(BLAST)

001: MANLVPGVLL KLLQHMNTDV KIAGEHRSSL LQVISIVPAL AGGELFPNQG FYLKVSDSSH ATYVSLPDEH DDLILSDKIQ LGQYIHVDRV ESSSPVPILR
101: GVRPVPGRHP CVGDPEDIVA THSLGFLSDD KVKNDNNGGV SSKPKERVKA SVKANGSGSD GERIIGNRLS VSISRDDSSD GKKPVSALFR AKSAKSSLSL
201: DVKKESLGKL KTSSGSKSIP SSPTSCYSLP NSFAKFANGI KQQQTVKPKL LEKGSPRMGL SEKGRSLLKA ESPKVGKKLP MIKNFVQGIE FGAKALRKSW
301: EGNLDIRGSD RTKSSLPRRD LTPDSRSLAA PRRSTSSEKL PSKQERANVF ARSSKEHNKI QSTKKVEPTA VLDTKDKTSR PKSTSVEKKS VAENGLPGNL
401: VKVSVNGKRL AAANIQWSSL PPSLSRMGQE VLRHREAAQV VAIEALQEAS ASESLLQCLI MYSDLLSTAK EDDPLPVVEQ FLKLHSGLKN VQVITESLSK
501: LLSLMSSPDN EENRSEEAIK AASEKQKLAA SWVQAALVTN LSPFSVYSSK QAKLAASRSK PVIILESPGN NSSSKTRGNI QNKPTIGSKL VAQGMIRKHR
601: ENSSSQKATS VAGSESPPLN WVKGNGLNEA TDLAEKLQMV SQDWFLGFVE RFLDADVITS SSLSLSDNGQ IAGMLSQLKS VNDWLDEIGS KEDEEGLQEV
701: SKETIDRLRK KIYEYLLTHV ESAAAALGGG GGSVSSPRPK PIETKAKR

Arabidopsis Description

At1g08760 [Source:UniProtKB/TrEMBL;Acc:Q9FRR2]
SUBAcon: [plastid,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.