Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G309900.1 | Wheat | cytosol, mitochondrion, plastid | 97.6 | 97.99 |
| TraesCS5B01G303400.1 | Wheat | cytosol, mitochondrion, plastid | 96.94 | 96.94 |
| HORVU5Hr1G079460.1 | Barley | cytosol, mitochondrion, plastid | 95.47 | 95.35 |
| Os09t0516700-01 | Rice | cytosol, extracellular, nucleus | 49.0 | 79.48 |
| EER99187 | Sorghum | cytosol, mitochondrion, nucleus | 77.63 | 78.47 |
| Zm00001d021181_P005 | Maize | cytosol, mitochondrion, nucleus | 76.7 | 77.42 |
| Zm00001d006130_P001 | Maize | mitochondrion, plastid | 73.9 | 72.93 |
| TraesCS7A01G266300.1 | Wheat | cytosol, mitochondrion, plastid | 68.84 | 70.34 |
| CDY05811 | Canola | cytosol | 10.79 | 62.79 |
| CDX91320 | Canola | extracellular | 7.99 | 60.0 |
| GSMUA_Achr11P... | Banana | cytosol, extracellular, nucleus | 31.03 | 55.61 |
| GSMUA_Achr5P25710_001 | Banana | cytosol, plasma membrane, plastid | 54.33 | 55.36 |
| GSMUA_Achr3P21570_001 | Banana | extracellular, peroxisome, plastid | 51.8 | 52.43 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plastid | 20.91 | 51.31 |
| CDY08643 | Canola | mitochondrion, nucleus | 8.12 | 49.59 |
| GSMUA_Achr11P... | Banana | plastid | 46.6 | 49.58 |
| CDY22665 | Canola | extracellular, nucleus, peroxisome | 40.48 | 48.41 |
| CDY06329 | Canola | extracellular, nucleus, peroxisome | 38.75 | 46.56 |
| VIT_05s0102g01200.t01 | Wine grape | endoplasmic reticulum, extracellular, nucleus | 45.27 | 46.01 |
| KRH24591 | Soybean | nucleus | 44.61 | 45.15 |
| KRH29601 | Soybean | nucleus | 44.47 | 45.01 |
| Solyc06g073110.2.1 | Tomato | endoplasmic reticulum, extracellular, nucleus | 44.47 | 44.71 |
| Bra031640.1-P | Field mustard | cytosol, nucleus, peroxisome | 40.35 | 43.79 |
| CDY69908 | Canola | plastid | 6.79 | 43.22 |
| CDX95036 | Canola | extracellular, nucleus, vacuole | 41.81 | 42.72 |
| KRH23226 | Soybean | nucleus | 42.48 | 42.31 |
| AT1G08760.1 | Thale cress | cytosol, plastid, vacuole | 41.94 | 42.11 |
| Bra018603.1-P | Field mustard | cytosol, nucleus, vacuole | 41.15 | 41.98 |
| CDX93540 | Canola | extracellular, nucleus, vacuole | 41.15 | 41.98 |
| KRH10106 | Soybean | nucleus | 42.21 | 41.17 |
| TraesCS4A01G231900.1 | Wheat | nucleus, plastid | 18.51 | 31.1 |
| TraesCS4A01G006800.1 | Wheat | cytosol | 22.5 | 28.64 |
| TraesCS4A01G192100.1 | Wheat | mitochondrion | 26.1 | 27.68 |
| TraesCS3A01G000300.1 | Wheat | cytosol, extracellular, mitochondrion, nucleus | 18.64 | 26.07 |
| TraesCS2A01G194300.1 | Wheat | plastid | 21.04 | 24.16 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G303100.1 | EnsemblPlantsGene:TraesCS5A01G303100 | InterPro:DUF936_pln | PANTHER:PTHR31928 | PANTHER:PTHR31928:SF11 | PFAM:PF06075 |
| SEG:seg | MapMan:20.1.5.4.2 | : | : | : | : |
Description
No Description!
Coordinates
chr5A:-:512253127..512257558
Molecular Weight (calculated)
79089.8 Da
IEP (calculated)
10.399
GRAVY (calculated)
-0.427
Length
751 amino acids
Sequence
(BLAST)
(BLAST)
001: MASLVPGVLV KLLQHMNTDV KVAGEHRSSL LQVVSIVPAL SGSDLFTNQG FYLKVSDSSH ATYVTLPEEQ HDLILSDKIQ LGQFIHVDRL EAATPVPILW
101: GVRPVPGRHP CVGNPEDLVL TSSSKVAGSK KAQPANGSKP TNGLKDAGVL SLEKEKSKLE KINAPHKTVG TENKKPVLTK SKSSLSKQAL NGVTEKKETV
201: KPKARPARVR STPSSPTSVY SLPATFDRFS SDLRQRHGVK GPEKASSSRL SLLERAASVL KVTTAGRRSS AVNSISSSVL GIGSGPKALR RSWEGAVDTK
301: AKNNSDSKTT KADRKPENRA PTTPRRKPPV NEKVTHKDDS KIHNPARKST SSAPAPPVDA DKAPKKHPPT LKRTSGGLSN PNVTNLVKIP PNSKKLTDVG
401: NSWASLPPSL AKLGKELLKY RESAQAAAVE AMQEASAAES LLRCLSLYAE VSSTAEEQNP QPTVEQFLAL HSSLSRATVI TDTLTKSAAP PECSAASDAG
501: TVVSAPDDEA AAAVAVERQR RAKSWVNAAL ATDLVGFGLY NLKPVPATVS SPLAVVIVDE SAKPVAASPN AVKSLSPAAK SRMSPAKGKP RTGPGATAAA
601: VTPAPPEWER GVGAEERGQL ARRLGEESRG WFLGFVERFL DADVSAAAPW DRERAARMLP QLKRVNDWLG EIGTRGEAPP PPPASQDGGE EPAATTAAAA
701: SANGCGVPEE TIERLRKKIY EFLLTNVDSA AAVLGGEAAA PAPAPASGKK S
101: GVRPVPGRHP CVGNPEDLVL TSSSKVAGSK KAQPANGSKP TNGLKDAGVL SLEKEKSKLE KINAPHKTVG TENKKPVLTK SKSSLSKQAL NGVTEKKETV
201: KPKARPARVR STPSSPTSVY SLPATFDRFS SDLRQRHGVK GPEKASSSRL SLLERAASVL KVTTAGRRSS AVNSISSSVL GIGSGPKALR RSWEGAVDTK
301: AKNNSDSKTT KADRKPENRA PTTPRRKPPV NEKVTHKDDS KIHNPARKST SSAPAPPVDA DKAPKKHPPT LKRTSGGLSN PNVTNLVKIP PNSKKLTDVG
401: NSWASLPPSL AKLGKELLKY RESAQAAAVE AMQEASAAES LLRCLSLYAE VSSTAEEQNP QPTVEQFLAL HSSLSRATVI TDTLTKSAAP PECSAASDAG
501: TVVSAPDDEA AAAVAVERQR RAKSWVNAAL ATDLVGFGLY NLKPVPATVS SPLAVVIVDE SAKPVAASPN AVKSLSPAAK SRMSPAKGKP RTGPGATAAA
601: VTPAPPEWER GVGAEERGQL ARRLGEESRG WFLGFVERFL DADVSAAAPW DRERAARMLP QLKRVNDWLG EIGTRGEAPP PPPASQDGGE EPAATTAAAA
701: SANGCGVPEE TIERLRKKIY EFLLTNVDSA AAVLGGEAAA PAPAPASGKK S
001: MANLVPGVLL KLLQHMNTDV KIAGEHRSSL LQVISIVPAL AGGELFPNQG FYLKVSDSSH ATYVSLPDEH DDLILSDKIQ LGQYIHVDRV ESSSPVPILR
101: GVRPVPGRHP CVGDPEDIVA THSLGFLSDD KVKNDNNGGV SSKPKERVKA SVKANGSGSD GERIIGNRLS VSISRDDSSD GKKPVSALFR AKSAKSSLSL
201: DVKKESLGKL KTSSGSKSIP SSPTSCYSLP NSFAKFANGI KQQQTVKPKL LEKGSPRMGL SEKGRSLLKA ESPKVGKKLP MIKNFVQGIE FGAKALRKSW
301: EGNLDIRGSD RTKSSLPRRD LTPDSRSLAA PRRSTSSEKL PSKQERANVF ARSSKEHNKI QSTKKVEPTA VLDTKDKTSR PKSTSVEKKS VAENGLPGNL
401: VKVSVNGKRL AAANIQWSSL PPSLSRMGQE VLRHREAAQV VAIEALQEAS ASESLLQCLI MYSDLLSTAK EDDPLPVVEQ FLKLHSGLKN VQVITESLSK
501: LLSLMSSPDN EENRSEEAIK AASEKQKLAA SWVQAALVTN LSPFSVYSSK QAKLAASRSK PVIILESPGN NSSSKTRGNI QNKPTIGSKL VAQGMIRKHR
601: ENSSSQKATS VAGSESPPLN WVKGNGLNEA TDLAEKLQMV SQDWFLGFVE RFLDADVITS SSLSLSDNGQ IAGMLSQLKS VNDWLDEIGS KEDEEGLQEV
701: SKETIDRLRK KIYEYLLTHV ESAAAALGGG GGSVSSPRPK PIETKAKR
101: GVRPVPGRHP CVGDPEDIVA THSLGFLSDD KVKNDNNGGV SSKPKERVKA SVKANGSGSD GERIIGNRLS VSISRDDSSD GKKPVSALFR AKSAKSSLSL
201: DVKKESLGKL KTSSGSKSIP SSPTSCYSLP NSFAKFANGI KQQQTVKPKL LEKGSPRMGL SEKGRSLLKA ESPKVGKKLP MIKNFVQGIE FGAKALRKSW
301: EGNLDIRGSD RTKSSLPRRD LTPDSRSLAA PRRSTSSEKL PSKQERANVF ARSSKEHNKI QSTKKVEPTA VLDTKDKTSR PKSTSVEKKS VAENGLPGNL
401: VKVSVNGKRL AAANIQWSSL PPSLSRMGQE VLRHREAAQV VAIEALQEAS ASESLLQCLI MYSDLLSTAK EDDPLPVVEQ FLKLHSGLKN VQVITESLSK
501: LLSLMSSPDN EENRSEEAIK AASEKQKLAA SWVQAALVTN LSPFSVYSSK QAKLAASRSK PVIILESPGN NSSSKTRGNI QNKPTIGSKL VAQGMIRKHR
601: ENSSSQKATS VAGSESPPLN WVKGNGLNEA TDLAEKLQMV SQDWFLGFVE RFLDADVITS SSLSLSDNGQ IAGMLSQLKS VNDWLDEIGS KEDEEGLQEV
701: SKETIDRLRK KIYEYLLTHV ESAAAALGGG GGSVSSPRPK PIETKAKR
Arabidopsis Description
At1g08760 [Source:UniProtKB/TrEMBL;Acc:Q9FRR2]
SUBAcon: [plastid,vacuole,cytosol]
SUBAcon: [plastid,vacuole,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.