CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, extracellular, nucleus

Predictor Summary:

nucleus 2
extracellular 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, nucleus, peroxisome
Any Predictor:	extracellular, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	extracellular
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY22665	Canola	extracellular, nucleus, peroxisome	90.08	89.65
Bra031640.1-P	Field mustard	cytosol, nucleus, peroxisome	96.8	87.43
CDX91320	Canola	extracellular	12.96	81.0
CDY05811	Canola	cytosol	15.2	73.64
CDX93540	Canola	extracellular, nucleus, vacuole	86.08	73.1
CDX95036	Canola	extracellular, nucleus, vacuole	83.84	71.29
AT1G08760.1	Thale cress	cytosol, plastid, vacuole	83.52	69.79
CDY69908	Canola	plastid	11.52	61.02
CDY08643	Canola	mitochondrion, nucleus	11.84	60.16
Solyc06g073110.2.1	Tomato	endoplasmic reticulum, extracellular, nucleus	58.88	49.26
Os09t0516700-01	Rice	cytosol, extracellular, nucleus	35.04	47.3
GSMUA_Achr11P...	Banana	cytosol, extracellular, nucleus	31.52	47.02
GSMUA_Achr5P25710_001	Banana	cytosol, plasma membrane, plastid	48.0	40.71
EER99187	Sorghum	cytosol, mitochondrion, nucleus	48.16	40.51
TraesCS7D01G268500.2	Wheat	cytosol, mitochondrion, nucleus	46.24	39.43
GSMUA_Achr3P21570_001	Banana	extracellular, peroxisome, plastid	46.72	39.35
HORVU5Hr1G079460.1	Barley	cytosol, mitochondrion, plastid	47.2	39.23
TraesCS7B01G166200.1	Wheat	cytosol, mitochondrion, plastid	45.92	39.15
TraesCS7A01G266300.1	Wheat	cytosol, mitochondrion, plastid	45.92	39.05
Zm00001d021181_P005	Maize	cytosol, mitochondrion, nucleus	46.4	38.98
TraesCS5D01G309900.1	Wheat	cytosol, mitochondrion, plastid	46.56	38.9
EES14150	Sorghum	cytosol, plasma membrane, plastid	46.08	38.76
TraesCS5A01G303100.1	Wheat	cytosol, mitochondrion, plastid	46.56	38.75
TraesCS5B01G303400.1	Wheat	cytosol, mitochondrion, plastid	46.56	38.75
Os08t0541500-01	Rice	mitochondrion, peroxisome, plastid	45.44	38.74
Zm00001d031700_P003	Maize	cytosol, mitochondrion, plastid	46.08	38.61
GSMUA_Achr11P...	Banana	plastid	43.2	38.24
Zm00001d006130_P001	Maize	mitochondrion, plastid	45.76	37.58
CDX97548	Canola	mitochondrion	26.88	33.14
CDY52268	Canola	mitochondrion	26.56	32.74
GSMUA_Achr11P...	Banana	cytosol, nucleus, plastid	15.52	31.7
CDY61547	Canola	nucleus	23.84	29.22
CDY47633	Canola	nucleus	24.0	28.96
CDX91723	Canola	nucleus	24.0	28.09
CDY57317	Canola	nucleus	23.52	26.82
CDY60513	Canola	plastid	23.04	26.57
CDY42075	Canola	plastid	23.04	26.33
CDY69222	Canola	mitochondrion, plastid	17.76	26.18
GSMUA_Achr9P08220_001	Banana	mitochondrion	43.84	25.51
CDY43695	Canola	mitochondrion	27.04	25.45
CDY01127	Canola	mitochondrion	25.6	25.4
CDY64935	Canola	mitochondrion	26.56	25.38
HORVU4Hr1G014370.1	Barley	nucleus, plastid	18.72	25.11
TraesCS4D01G082000.1	Wheat	nucleus, plastid	18.72	25.0
TraesCS4B01G084100.1	Wheat	nucleus, plastid	18.56	24.95
TraesCS4A01G231900.1	Wheat	nucleus, plastid	17.76	24.83
KXG28276	Sorghum	plastid	19.52	24.75
CDX82287	Canola	endoplasmic reticulum	22.4	22.26
CDY22966	Canola	endoplasmic reticulum	22.4	22.22

Protein Annotations

EnsemblPlants:CDY06329	EnsemblPlantsGene:GSBRNA2T00122259001	InterPro:DUF936_pln	PANTHER:PTHR31928	PANTHER:PTHR31928:SF4	PFAM:PF06075
ProteinID:CDY06329	ProteinID:CDY06329.1	SEG:seg	UniParc:UPI0004EE394B	MapMan:20.1.5.4.2	:

Description

BnaA09g48740D

Coordinates

chrLK031968:+:831838..834126

Molecular Weight (calculated)

67691.9 Da

IEP (calculated)

10.319

GRAVY (calculated)

-0.470

Length

625 amino acids

Sequence
(BLAST)

001: MANLVPGVLL KLLQHMNTDV KIAGEHRSSL LQVISIVPAL AGGELFSNQG FYLKVSDSSH ATYVSLPDEQ DDLILSDKLQ LGQFIHVDRV ESSSPVPILC
101: GVRVVPGRHP CLGTPEDIVA TQFLSGNGLK PKERVKATAK GGVVAPNKSE SCESKKPSSL SRAKSGLSLD VRKEPLRKLK TSKSIPSSPT SCYSLPTSFA
201: KFANGIKQQQ TVKPEKGRFL LKVESPSVGK KLPLIKNFVQ GIEFGAKALR KSWEGSLDIR ASDRSRLKNL TKRDTTPDAR SLTAPRKSTS SEKLPSKQER
301: ANVFAKSSKE NSKTQSTKKV ESTVVETKDK TSKPKSTSTT VDKRSTAENG LPGSLVKVPV NSKRLTSAST QWSSLPSSLS RLGQEVLRHR DAAQVVAIEA
401: LQEASASESL LQCLIMYNDL MSTAKMDDPL PVVEQFLKLH SSLKNVQIVT DQGNNTTSKP RGNVQNRPTF GSKLVAQGMI RKSSQKATTV AGGSESPPPK
501: WVKGNGLNEA TDLAEKLQTV SQDWFLGFVE RFLDADVVET SSNLSDNGQI AGMLSQLKSV NDWLDEIGSK ENGEGLQEVS KETIDGLRKK IYEYLLTHVE
601: SAAAALGGGS VSSPRHKPIE TKAKR

Best Arabidopsis Sequence Match ( AT1G08760.1 )
(BLAST)

001: MANLVPGVLL KLLQHMNTDV KIAGEHRSSL LQVISIVPAL AGGELFPNQG FYLKVSDSSH ATYVSLPDEH DDLILSDKIQ LGQYIHVDRV ESSSPVPILR
101: GVRPVPGRHP CVGDPEDIVA THSLGFLSDD KVKNDNNGGV SSKPKERVKA SVKANGSGSD GERIIGNRLS VSISRDDSSD GKKPVSALFR AKSAKSSLSL
201: DVKKESLGKL KTSSGSKSIP SSPTSCYSLP NSFAKFANGI KQQQTVKPKL LEKGSPRMGL SEKGRSLLKA ESPKVGKKLP MIKNFVQGIE FGAKALRKSW
301: EGNLDIRGSD RTKSSLPRRD LTPDSRSLAA PRRSTSSEKL PSKQERANVF ARSSKEHNKI QSTKKVEPTA VLDTKDKTSR PKSTSVEKKS VAENGLPGNL
401: VKVSVNGKRL AAANIQWSSL PPSLSRMGQE VLRHREAAQV VAIEALQEAS ASESLLQCLI MYSDLLSTAK EDDPLPVVEQ FLKLHSGLKN VQVITESLSK
501: LLSLMSSPDN EENRSEEAIK AASEKQKLAA SWVQAALVTN LSPFSVYSSK QAKLAASRSK PVIILESPGN NSSSKTRGNI QNKPTIGSKL VAQGMIRKHR
601: ENSSSQKATS VAGSESPPLN WVKGNGLNEA TDLAEKLQMV SQDWFLGFVE RFLDADVITS SSLSLSDNGQ IAGMLSQLKS VNDWLDEIGS KEDEEGLQEV
701: SKETIDRLRK KIYEYLLTHV ESAAAALGGG GGSVSSPRPK PIETKAKR

Arabidopsis Description

At1g08760 [Source:UniProtKB/TrEMBL;Acc:Q9FRR2]
SUBAcon: [plastid,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.