Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G166200.1 | Wheat | cytosol, mitochondrion, plastid | 98.23 | 98.23 |
| TraesCS7A01G266300.1 | Wheat | cytosol, mitochondrion, plastid | 96.73 | 96.46 |
| Os08t0541500-01 | Rice | mitochondrion, peroxisome, plastid | 81.86 | 81.86 |
| EES14150 | Sorghum | cytosol, plasma membrane, plastid | 81.99 | 80.89 |
| Zm00001d031700_P003 | Maize | cytosol, mitochondrion, plastid | 79.4 | 78.02 |
| TraesCS5D01G309900.1 | Wheat | cytosol, mitochondrion, plastid | 70.8 | 69.39 |
| CDY05811 | Canola | cytosol | 11.46 | 65.12 |
| GSMUA_Achr11P... | Banana | cytosol, extracellular, nucleus | 32.61 | 57.04 |
| GSMUA_Achr5P25710_001 | Banana | cytosol, plasma membrane, plastid | 57.03 | 56.72 |
| CDX91320 | Canola | extracellular | 7.64 | 56.0 |
| GSMUA_Achr3P21570_001 | Banana | extracellular, peroxisome, plastid | 54.02 | 53.37 |
| GSMUA_Achr11P... | Banana | plastid | 49.8 | 51.7 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plastid | 21.42 | 51.31 |
| CDY08643 | Canola | mitochondrion, nucleus | 8.32 | 49.59 |
| CDY22665 | Canola | extracellular, nucleus, peroxisome | 40.93 | 47.77 |
| VIT_05s0102g01200.t01 | Wine grape | endoplasmic reticulum, extracellular, nucleus | 48.16 | 47.77 |
| Solyc06g073110.2.1 | Tomato | endoplasmic reticulum, extracellular, nucleus | 47.61 | 46.72 |
| CDY06329 | Canola | extracellular, nucleus, peroxisome | 39.43 | 46.24 |
| KRH29601 | Soybean | nucleus | 46.11 | 45.55 |
| KRH24591 | Soybean | nucleus | 45.57 | 45.01 |
| Bra031640.1-P | Field mustard | cytosol, nucleus, peroxisome | 42.16 | 44.65 |
| CDX95036 | Canola | extracellular, nucleus, vacuole | 43.52 | 43.4 |
| AT1G08760.1 | Thale cress | cytosol, plastid, vacuole | 44.07 | 43.18 |
| KRH23226 | Soybean | nucleus | 44.34 | 43.1 |
| Bra018603.1-P | Field mustard | cytosol, nucleus, vacuole | 43.25 | 43.07 |
| CDX93540 | Canola | extracellular, nucleus, vacuole | 43.11 | 42.93 |
| KRH10106 | Soybean | nucleus | 44.2 | 42.08 |
| CDY69908 | Canola | plastid | 6.41 | 39.83 |
| TraesCS4D01G082000.1 | Wheat | nucleus, plastid | 20.6 | 32.27 |
| TraesCS4D01G297000.1 | Wheat | cytosol | 23.6 | 29.32 |
| TraesCS3D01G008800.1 | Wheat | cytosol, extracellular, mitochondrion, nucleus | 20.05 | 26.82 |
| TraesCS4D01G121400.1 | Wheat | mitochondrion | 24.97 | 25.35 |
| TraesCS2D01G193600.1 | Wheat | plastid | 21.69 | 24.39 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G268500.2 | EnsemblPlantsGene:TraesCS7D01G268500 | InterPro:DUF936_pln | ncoils:Coil | PANTHER:PTHR31928 | PANTHER:PTHR31928:SF11 |
| PFAM:PF06075 | SEG:seg | MapMan:20.1.5.4.2 | : | : | : |
Description
No Description!
Coordinates
chr7D:-:252263037..252267022
Molecular Weight (calculated)
77628.7 Da
IEP (calculated)
10.163
GRAVY (calculated)
-0.435
Length
733 amino acids
Sequence
(BLAST)
(BLAST)
001: MASLVPGVLL KLLQHMNSDV KVAGEHRSSL LQVVSIVPAL AGSDLFTNQG FYLKVSDSSH ATYVSLPEDQ HDLILSDTIQ LGQFIHVDRL EAATPVPILR
101: GVRPVPGRHA CVGTPEDLVM TSSSKFLGEK KAQPPANGSK DAGALSLEKE QSKLEKLNAS VKNNGTETKK PQLTKSNSSL SKQALASLFD KKEVVSSKVK
201: SNNPRSTPSS PTSVHSLPAS FERFSNGMKQ RTKVKGADKS SPSKLSLLEK AASVLKVTTA GRKSSAGNSL SNTLLSLESG PKALRRSWEG KADANVKANS
301: DSKGAKADRK SEIRSTSTPR RRPPPPADEK PSHKDDTKIL TPPRKSTASA PSDDSDRPVN KHLSPIRRTS GVLSNTNITN LVKIAANSKK LTDASTSWTA
401: LPPSLAKLGK ELLKYRDAAQ MAAVEAMQEA SAAESLLRCL SSYAEVSSTA EEQNPQLAVE QFLALHSAMS RATVVADSLA KAAAATSTAT SPDQSTAGEA
501: ASIDEESLAV AAERRRRAAS WVGAGLATDL SAFSLYNLRP APANTSSPLA VVLVDESVKP AATTKASPPA KSRLSPAKGK GRPVHVVAAA AATAAPPPEW
601: ERGGGAEERG ELARRLGEEA RRWFLEFVER FLDADVAAAA PWDRDRAARM LPQLKRVNDW LSEIGNPPPV EPPPHDAGDE EVGAAAPATA SNGVPEQTIE
701: RLRKKIYEYL LTNVDSAAAV LGETSPAAIG RKG
101: GVRPVPGRHA CVGTPEDLVM TSSSKFLGEK KAQPPANGSK DAGALSLEKE QSKLEKLNAS VKNNGTETKK PQLTKSNSSL SKQALASLFD KKEVVSSKVK
201: SNNPRSTPSS PTSVHSLPAS FERFSNGMKQ RTKVKGADKS SPSKLSLLEK AASVLKVTTA GRKSSAGNSL SNTLLSLESG PKALRRSWEG KADANVKANS
301: DSKGAKADRK SEIRSTSTPR RRPPPPADEK PSHKDDTKIL TPPRKSTASA PSDDSDRPVN KHLSPIRRTS GVLSNTNITN LVKIAANSKK LTDASTSWTA
401: LPPSLAKLGK ELLKYRDAAQ MAAVEAMQEA SAAESLLRCL SSYAEVSSTA EEQNPQLAVE QFLALHSAMS RATVVADSLA KAAAATSTAT SPDQSTAGEA
501: ASIDEESLAV AAERRRRAAS WVGAGLATDL SAFSLYNLRP APANTSSPLA VVLVDESVKP AATTKASPPA KSRLSPAKGK GRPVHVVAAA AATAAPPPEW
601: ERGGGAEERG ELARRLGEEA RRWFLEFVER FLDADVAAAA PWDRDRAARM LPQLKRVNDW LSEIGNPPPV EPPPHDAGDE EVGAAAPATA SNGVPEQTIE
701: RLRKKIYEYL LTNVDSAAAV LGETSPAAIG RKG
001: MANLVPGVLL KLLQHMNTDV KIAGEHRSSL LQVISIVPAL AGGELFPNQG FYLKVSDSSH ATYVSLPDEH DDLILSDKIQ LGQYIHVDRV ESSSPVPILR
101: GVRPVPGRHP CVGDPEDIVA THSLGFLSDD KVKNDNNGGV SSKPKERVKA SVKANGSGSD GERIIGNRLS VSISRDDSSD GKKPVSALFR AKSAKSSLSL
201: DVKKESLGKL KTSSGSKSIP SSPTSCYSLP NSFAKFANGI KQQQTVKPKL LEKGSPRMGL SEKGRSLLKA ESPKVGKKLP MIKNFVQGIE FGAKALRKSW
301: EGNLDIRGSD RTKSSLPRRD LTPDSRSLAA PRRSTSSEKL PSKQERANVF ARSSKEHNKI QSTKKVEPTA VLDTKDKTSR PKSTSVEKKS VAENGLPGNL
401: VKVSVNGKRL AAANIQWSSL PPSLSRMGQE VLRHREAAQV VAIEALQEAS ASESLLQCLI MYSDLLSTAK EDDPLPVVEQ FLKLHSGLKN VQVITESLSK
501: LLSLMSSPDN EENRSEEAIK AASEKQKLAA SWVQAALVTN LSPFSVYSSK QAKLAASRSK PVIILESPGN NSSSKTRGNI QNKPTIGSKL VAQGMIRKHR
601: ENSSSQKATS VAGSESPPLN WVKGNGLNEA TDLAEKLQMV SQDWFLGFVE RFLDADVITS SSLSLSDNGQ IAGMLSQLKS VNDWLDEIGS KEDEEGLQEV
701: SKETIDRLRK KIYEYLLTHV ESAAAALGGG GGSVSSPRPK PIETKAKR
101: GVRPVPGRHP CVGDPEDIVA THSLGFLSDD KVKNDNNGGV SSKPKERVKA SVKANGSGSD GERIIGNRLS VSISRDDSSD GKKPVSALFR AKSAKSSLSL
201: DVKKESLGKL KTSSGSKSIP SSPTSCYSLP NSFAKFANGI KQQQTVKPKL LEKGSPRMGL SEKGRSLLKA ESPKVGKKLP MIKNFVQGIE FGAKALRKSW
301: EGNLDIRGSD RTKSSLPRRD LTPDSRSLAA PRRSTSSEKL PSKQERANVF ARSSKEHNKI QSTKKVEPTA VLDTKDKTSR PKSTSVEKKS VAENGLPGNL
401: VKVSVNGKRL AAANIQWSSL PPSLSRMGQE VLRHREAAQV VAIEALQEAS ASESLLQCLI MYSDLLSTAK EDDPLPVVEQ FLKLHSGLKN VQVITESLSK
501: LLSLMSSPDN EENRSEEAIK AASEKQKLAA SWVQAALVTN LSPFSVYSSK QAKLAASRSK PVIILESPGN NSSSKTRGNI QNKPTIGSKL VAQGMIRKHR
601: ENSSSQKATS VAGSESPPLN WVKGNGLNEA TDLAEKLQMV SQDWFLGFVE RFLDADVITS SSLSLSDNGQ IAGMLSQLKS VNDWLDEIGS KEDEEGLQEV
701: SKETIDRLRK KIYEYLLTHV ESAAAALGGG GGSVSSPRPK PIETKAKR
Arabidopsis Description
At1g08760 [Source:UniProtKB/TrEMBL;Acc:Q9FRR2]
SUBAcon: [plastid,vacuole,cytosol]
SUBAcon: [plastid,vacuole,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.