Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G084100.1 | Wheat | nucleus, plastid | 95.3 | 95.91 |
| HORVU4Hr1G014370.1 | Barley | nucleus, plastid | 91.88 | 92.27 |
| TraesCS4A01G231900.1 | Wheat | nucleus, plastid | 86.75 | 90.83 |
| KXG28276 | Sorghum | plastid | 53.42 | 50.71 |
| TraesCS7D01G268500.2 | Wheat | cytosol, mitochondrion, nucleus | 32.27 | 20.6 |
| TraesCS5D01G309900.1 | Wheat | cytosol, mitochondrion, plastid | 31.2 | 19.52 |
| VIT_05s0102g01200.t01 | Wine grape | endoplasmic reticulum, extracellular, nucleus | 30.77 | 19.49 |
| KRH24591 | Soybean | nucleus | 30.13 | 19.0 |
| KRH29601 | Soybean | nucleus | 29.7 | 18.73 |
| CDY06329 | Canola | extracellular, nucleus, peroxisome | 25.0 | 18.72 |
| CDY22665 | Canola | extracellular, nucleus, peroxisome | 25.0 | 18.63 |
| Bra031640.1-P | Field mustard | cytosol, nucleus, peroxisome | 27.35 | 18.5 |
| Solyc06g073110.2.1 | Tomato | endoplasmic reticulum, extracellular, nucleus | 29.49 | 18.47 |
| CDX95036 | Canola | extracellular, nucleus, vacuole | 27.56 | 17.55 |
| Bra018603.1-P | Field mustard | cytosol, nucleus, vacuole | 27.56 | 17.53 |
| CDX93540 | Canola | extracellular, nucleus, vacuole | 27.56 | 17.53 |
| AT1G08760.1 | Thale cress | cytosol, plastid, vacuole | 27.78 | 17.38 |
| KRH23226 | Soybean | nucleus | 27.99 | 17.37 |
| KRH10106 | Soybean | nucleus | 27.99 | 17.01 |
| TraesCS2D01G193600.1 | Wheat | plastid | 22.44 | 16.1 |
| TraesCS4D01G121400.1 | Wheat | mitochondrion | 21.58 | 13.99 |
| TraesCS4D01G297000.1 | Wheat | cytosol | 17.52 | 13.9 |
| TraesCS3D01G008800.1 | Wheat | cytosol, extracellular, mitochondrion, nucleus | 15.81 | 13.5 |
| GSMUA_Achr9P08220_001 | Banana | mitochondrion | 29.91 | 13.04 |
| CDX91320 | Canola | extracellular | 2.56 | 12.0 |
| CDY69908 | Canola | plastid | 2.35 | 9.32 |
| CDY05811 | Canola | cytosol | 2.56 | 9.3 |
| CDY08643 | Canola | mitochondrion, nucleus | 1.5 | 5.69 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G082000.1 | EnsemblPlantsGene:TraesCS4D01G082000 | InterPro:DUF936_pln | PANTHER:PTHR31928 | PANTHER:PTHR31928:SF8 | PFAM:PF06075 |
| SEG:seg | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr4D:+:55486764..55489889
Molecular Weight (calculated)
49516.2 Da
IEP (calculated)
10.782
GRAVY (calculated)
-0.578
Length
468 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKPKRSSQP SHRRFESLDV KRSSSSLNMS TSSLRSINEE DRGAAAAHAG RRPTVVRFAP TPTPPRPSSS SGTRRGSHLA PQLQAPKAAR PATAAVRPAS
101: PSGPKPARPS PAESGPKATR RSWGCTGSSG DQKERVTGDV IGGERSKGAA ATLVRSSSVP RSRKPVEEKP LQKRESKTNI ISRTKQRPTA SPKPDVLHKP
201: GAQRSPSIAT KTSEKRPPTP GGASPDDMVK VSPPRSTSAT TMGASWESLP PALQTLGSGV MSYRDAAEMA AVEAMQEASA AEIVLRCLSA FADLAATAGK
301: QSPQQTVDEF LALQAAIARS TAALGNQQRS GHAGEWLHAA VTADLSPFSL YTAPSSSSRK RGTESPAVSA TPRPVAAAEE ADTWLETAAR ELGEEMCAWF
401: VGHVDRLLEA DVAGTLGQLK RVNDWLDDVG LRTDAVERLK QKIFGYLLDH VESAVVALNG GVASNRRK
101: PSGPKPARPS PAESGPKATR RSWGCTGSSG DQKERVTGDV IGGERSKGAA ATLVRSSSVP RSRKPVEEKP LQKRESKTNI ISRTKQRPTA SPKPDVLHKP
201: GAQRSPSIAT KTSEKRPPTP GGASPDDMVK VSPPRSTSAT TMGASWESLP PALQTLGSGV MSYRDAAEMA AVEAMQEASA AEIVLRCLSA FADLAATAGK
301: QSPQQTVDEF LALQAAIARS TAALGNQQRS GHAGEWLHAA VTADLSPFSL YTAPSSSSRK RGTESPAVSA TPRPVAAAEE ADTWLETAAR ELGEEMCAWF
401: VGHVDRLLEA DVAGTLGQLK RVNDWLDDVG LRTDAVERLK QKIFGYLLDH VESAVVALNG GVASNRRK
001: MANLVPGVLL KLLQHMNTDV KIAGEHRSSL LQVISIVPAL AGGELFPNQG FYLKVSDSSH ATYVSLPDEH DDLILSDKIQ LGQYIHVDRV ESSSPVPILR
101: GVRPVPGRHP CVGDPEDIVA THSLGFLSDD KVKNDNNGGV SSKPKERVKA SVKANGSGSD GERIIGNRLS VSISRDDSSD GKKPVSALFR AKSAKSSLSL
201: DVKKESLGKL KTSSGSKSIP SSPTSCYSLP NSFAKFANGI KQQQTVKPKL LEKGSPRMGL SEKGRSLLKA ESPKVGKKLP MIKNFVQGIE FGAKALRKSW
301: EGNLDIRGSD RTKSSLPRRD LTPDSRSLAA PRRSTSSEKL PSKQERANVF ARSSKEHNKI QSTKKVEPTA VLDTKDKTSR PKSTSVEKKS VAENGLPGNL
401: VKVSVNGKRL AAANIQWSSL PPSLSRMGQE VLRHREAAQV VAIEALQEAS ASESLLQCLI MYSDLLSTAK EDDPLPVVEQ FLKLHSGLKN VQVITESLSK
501: LLSLMSSPDN EENRSEEAIK AASEKQKLAA SWVQAALVTN LSPFSVYSSK QAKLAASRSK PVIILESPGN NSSSKTRGNI QNKPTIGSKL VAQGMIRKHR
601: ENSSSQKATS VAGSESPPLN WVKGNGLNEA TDLAEKLQMV SQDWFLGFVE RFLDADVITS SSLSLSDNGQ IAGMLSQLKS VNDWLDEIGS KEDEEGLQEV
701: SKETIDRLRK KIYEYLLTHV ESAAAALGGG GGSVSSPRPK PIETKAKR
101: GVRPVPGRHP CVGDPEDIVA THSLGFLSDD KVKNDNNGGV SSKPKERVKA SVKANGSGSD GERIIGNRLS VSISRDDSSD GKKPVSALFR AKSAKSSLSL
201: DVKKESLGKL KTSSGSKSIP SSPTSCYSLP NSFAKFANGI KQQQTVKPKL LEKGSPRMGL SEKGRSLLKA ESPKVGKKLP MIKNFVQGIE FGAKALRKSW
301: EGNLDIRGSD RTKSSLPRRD LTPDSRSLAA PRRSTSSEKL PSKQERANVF ARSSKEHNKI QSTKKVEPTA VLDTKDKTSR PKSTSVEKKS VAENGLPGNL
401: VKVSVNGKRL AAANIQWSSL PPSLSRMGQE VLRHREAAQV VAIEALQEAS ASESLLQCLI MYSDLLSTAK EDDPLPVVEQ FLKLHSGLKN VQVITESLSK
501: LLSLMSSPDN EENRSEEAIK AASEKQKLAA SWVQAALVTN LSPFSVYSSK QAKLAASRSK PVIILESPGN NSSSKTRGNI QNKPTIGSKL VAQGMIRKHR
601: ENSSSQKATS VAGSESPPLN WVKGNGLNEA TDLAEKLQMV SQDWFLGFVE RFLDADVITS SSLSLSDNGQ IAGMLSQLKS VNDWLDEIGS KEDEEGLQEV
701: SKETIDRLRK KIYEYLLTHV ESAAAALGGG GGSVSSPRPK PIETKAKR
Arabidopsis Description
At1g08760 [Source:UniProtKB/TrEMBL;Acc:Q9FRR2]
SUBAcon: [plastid,vacuole,cytosol]
SUBAcon: [plastid,vacuole,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.