Subcellular Localization
min:
: max
Winner_takes_all: plastid, vacuole, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- mitochondrion 1
- plastid 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY06329 | Canola | extracellular, nucleus, peroxisome | 69.79 | 83.52 |
| CDX95036 | Canola | extracellular, nucleus, vacuole | 81.28 | 82.72 |
| Bra031640.1-P | Field mustard | cytosol, nucleus, peroxisome | 76.34 | 82.51 |
| CDY22665 | Canola | extracellular, nucleus, peroxisome | 69.25 | 82.48 |
| Bra018603.1-P | Field mustard | cytosol, nucleus, vacuole | 81.15 | 82.47 |
| CDX93540 | Canola | extracellular, nucleus, vacuole | 81.02 | 82.34 |
| CDY05811 | Canola | cytosol | 13.64 | 79.07 |
| VIT_05s0102g01200.t01 | Wine grape | endoplasmic reticulum, extracellular, nucleus | 56.82 | 57.51 |
| Solyc06g073110.2.1 | Tomato | endoplasmic reticulum, extracellular, nucleus | 56.55 | 56.63 |
| KRH29601 | Soybean | nucleus | 55.08 | 55.53 |
| KRH23226 | Soybean | nucleus | 54.81 | 54.38 |
| KRH24591 | Soybean | nucleus | 53.74 | 54.18 |
| KRH10106 | Soybean | nucleus | 54.81 | 53.25 |
| GSMUA_Achr11P... | Banana | cytosol, extracellular, nucleus | 27.54 | 49.16 |
| Os09t0516700-01 | Rice | cytosol, extracellular, nucleus | 29.55 | 47.73 |
| GSMUA_Achr3P21570_001 | Banana | extracellular, peroxisome, plastid | 45.19 | 45.55 |
| GSMUA_Achr5P25710_001 | Banana | cytosol, plasma membrane, plastid | 44.79 | 45.45 |
| EER99187 | Sorghum | cytosol, mitochondrion, nucleus | 44.65 | 44.95 |
| TraesCS7D01G268500.2 | Wheat | cytosol, mitochondrion, nucleus | 43.18 | 44.07 |
| EES14150 | Sorghum | cytosol, plasma membrane, plastid | 43.58 | 43.88 |
| TraesCS7A01G266300.1 | Wheat | cytosol, mitochondrion, plastid | 43.05 | 43.81 |
| Os08t0541500-01 | Rice | mitochondrion, peroxisome, plastid | 42.91 | 43.79 |
| TraesCS7B01G166200.1 | Wheat | cytosol, mitochondrion, plastid | 42.78 | 43.66 |
| Zm00001d021181_P005 | Maize | cytosol, mitochondrion, nucleus | 43.32 | 43.55 |
| Zm00001d031700_P003 | Maize | cytosol, mitochondrion, plastid | 42.91 | 43.03 |
| GSMUA_Achr11P... | Banana | plastid | 40.24 | 42.63 |
| TraesCS5D01G309900.1 | Wheat | cytosol, mitochondrion, plastid | 42.38 | 42.38 |
| Zm00001d006130_P001 | Maize | mitochondrion, plastid | 43.05 | 42.31 |
| HORVU5Hr1G079460.1 | Barley | cytosol, mitochondrion, plastid | 42.51 | 42.29 |
| TraesCS5B01G303400.1 | Wheat | cytosol, mitochondrion, plastid | 42.38 | 42.21 |
| TraesCS5A01G303100.1 | Wheat | cytosol, mitochondrion, plastid | 42.11 | 41.94 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plastid | 16.84 | 41.18 |
| AT3G14170.2 | Thale cress | cytosol, golgi, mitochondrion, nucleus | 23.4 | 34.59 |
| AT1G23790.1 | Thale cress | nucleus | 20.72 | 29.92 |
| AT4G13370.1 | Thale cress | endoplasmic reticulum, mitochondrion | 25.8 | 28.68 |
| GSMUA_Achr9P08220_001 | Banana | mitochondrion | 41.04 | 28.58 |
| AT2G31920.1 | Thale cress | plastid | 21.79 | 27.86 |
| TraesCS4D01G082000.1 | Wheat | nucleus, plastid | 17.38 | 27.78 |
| HORVU4Hr1G014370.1 | Barley | nucleus, plastid | 17.11 | 27.47 |
| TraesCS4B01G084100.1 | Wheat | nucleus, plastid | 16.98 | 27.31 |
| TraesCS4A01G231900.1 | Wheat | nucleus, plastid | 16.31 | 27.29 |
| KXG28276 | Sorghum | plastid | 17.78 | 26.98 |
| AT1G70340.1 | Thale cress | mitochondrion | 18.32 | 26.86 |
| AT3G19610.1 | Thale cress | vacuole | 22.19 | 25.94 |
Protein Annotations
| MapMan:20.1.5.4.2 | EntrezGene:837398 | UniProt:A0A178WFF3 | ProteinID:AAF99766.1 | ProteinID:AEE28344.1 | ArrayExpress:AT1G08760 |
| EnsemblPlantsGene:AT1G08760 | RefSeq:AT1G08760 | TAIR:AT1G08760 | RefSeq:AT1G08760-TAIR-G | EnsemblPlants:AT1G08760.1 | TAIR:AT1G08760.1 |
| EMBL:AY099633 | EMBL:BT010341 | InterPro:DUF936_pln | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0008017 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0030154 | GO:GO:0048759 |
| RefSeq:NP_172353.1 | ProteinID:OAP16235.1 | PFAM:PF06075 | PO:PO:0000005 | PO:PO:0000293 | PANTHER:PTHR31928 |
| PANTHER:PTHR31928:SF4 | UniProt:Q9FRR2 | UniParc:UPI00000A47E9 | SEG:seg | : | : |
Description
At1g08760 [Source:UniProtKB/TrEMBL;Acc:Q9FRR2]
Coordinates
chr1:+:2805044..2808623
Molecular Weight (calculated)
80753.2 Da
IEP (calculated)
10.267
GRAVY (calculated)
-0.476
Length
748 amino acids
Sequence
(BLAST)
(BLAST)
001: MANLVPGVLL KLLQHMNTDV KIAGEHRSSL LQVISIVPAL AGGELFPNQG FYLKVSDSSH ATYVSLPDEH DDLILSDKIQ LGQYIHVDRV ESSSPVPILR
101: GVRPVPGRHP CVGDPEDIVA THSLGFLSDD KVKNDNNGGV SSKPKERVKA SVKANGSGSD GERIIGNRLS VSISRDDSSD GKKPVSALFR AKSAKSSLSL
201: DVKKESLGKL KTSSGSKSIP SSPTSCYSLP NSFAKFANGI KQQQTVKPKL LEKGSPRMGL SEKGRSLLKA ESPKVGKKLP MIKNFVQGIE FGAKALRKSW
301: EGNLDIRGSD RTKSSLPRRD LTPDSRSLAA PRRSTSSEKL PSKQERANVF ARSSKEHNKI QSTKKVEPTA VLDTKDKTSR PKSTSVEKKS VAENGLPGNL
401: VKVSVNGKRL AAANIQWSSL PPSLSRMGQE VLRHREAAQV VAIEALQEAS ASESLLQCLI MYSDLLSTAK EDDPLPVVEQ FLKLHSGLKN VQVITESLSK
501: LLSLMSSPDN EENRSEEAIK AASEKQKLAA SWVQAALVTN LSPFSVYSSK QAKLAASRSK PVIILESPGN NSSSKTRGNI QNKPTIGSKL VAQGMIRKHR
601: ENSSSQKATS VAGSESPPLN WVKGNGLNEA TDLAEKLQMV SQDWFLGFVE RFLDADVITS SSLSLSDNGQ IAGMLSQLKS VNDWLDEIGS KEDEEGLQEV
701: SKETIDRLRK KIYEYLLTHV ESAAAALGGG GGSVSSPRPK PIETKAKR
101: GVRPVPGRHP CVGDPEDIVA THSLGFLSDD KVKNDNNGGV SSKPKERVKA SVKANGSGSD GERIIGNRLS VSISRDDSSD GKKPVSALFR AKSAKSSLSL
201: DVKKESLGKL KTSSGSKSIP SSPTSCYSLP NSFAKFANGI KQQQTVKPKL LEKGSPRMGL SEKGRSLLKA ESPKVGKKLP MIKNFVQGIE FGAKALRKSW
301: EGNLDIRGSD RTKSSLPRRD LTPDSRSLAA PRRSTSSEKL PSKQERANVF ARSSKEHNKI QSTKKVEPTA VLDTKDKTSR PKSTSVEKKS VAENGLPGNL
401: VKVSVNGKRL AAANIQWSSL PPSLSRMGQE VLRHREAAQV VAIEALQEAS ASESLLQCLI MYSDLLSTAK EDDPLPVVEQ FLKLHSGLKN VQVITESLSK
501: LLSLMSSPDN EENRSEEAIK AASEKQKLAA SWVQAALVTN LSPFSVYSSK QAKLAASRSK PVIILESPGN NSSSKTRGNI QNKPTIGSKL VAQGMIRKHR
601: ENSSSQKATS VAGSESPPLN WVKGNGLNEA TDLAEKLQMV SQDWFLGFVE RFLDADVITS SSLSLSDNGQ IAGMLSQLKS VNDWLDEIGS KEDEEGLQEV
701: SKETIDRLRK KIYEYLLTHV ESAAAALGGG GGSVSSPRPK PIETKAKR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.