Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G082000.1 | Wheat | nucleus, plastid | 90.83 | 86.75 |
| TraesCS4B01G084100.1 | Wheat | nucleus, plastid | 89.93 | 86.45 |
| HORVU4Hr1G014370.1 | Barley | nucleus, plastid | 88.81 | 85.19 |
| KXG28276 | Sorghum | plastid | 52.8 | 47.87 |
| TraesCS7A01G266300.1 | Wheat | cytosol, mitochondrion, plastid | 31.99 | 19.46 |
| VIT_05s0102g01200.t01 | Wine grape | endoplasmic reticulum, extracellular, nucleus | 30.65 | 18.54 |
| TraesCS5A01G303100.1 | Wheat | cytosol, mitochondrion, plastid | 31.1 | 18.51 |
| KRH24591 | Soybean | nucleus | 30.43 | 18.33 |
| KRH29601 | Soybean | nucleus | 29.98 | 18.06 |
| Solyc06g073110.2.1 | Tomato | endoplasmic reticulum, extracellular, nucleus | 29.98 | 17.94 |
| CDY22665 | Canola | extracellular, nucleus, peroxisome | 25.06 | 17.83 |
| CDY06329 | Canola | extracellular, nucleus, peroxisome | 24.83 | 17.76 |
| Bra031640.1-P | Field mustard | cytosol, nucleus, peroxisome | 27.07 | 17.49 |
| KRH23226 | Soybean | nucleus | 28.64 | 16.98 |
| CDX95036 | Canola | extracellular, nucleus, vacuole | 27.29 | 16.6 |
| CDX93540 | Canola | extracellular, nucleus, vacuole | 27.29 | 16.58 |
| Bra018603.1-P | Field mustard | cytosol, nucleus, vacuole | 27.29 | 16.58 |
| KRH10106 | Soybean | nucleus | 28.41 | 16.49 |
| AT1G08760.1 | Thale cress | cytosol, plastid, vacuole | 27.29 | 16.31 |
| TraesCS2A01G194300.1 | Wheat | plastid | 22.15 | 15.14 |
| TraesCS3A01G000300.1 | Wheat | cytosol, extracellular, mitochondrion, nucleus | 15.88 | 13.22 |
| TraesCS4A01G006800.1 | Wheat | cytosol | 17.23 | 13.05 |
| TraesCS4A01G192100.1 | Wheat | mitochondrion | 20.36 | 12.85 |
| GSMUA_Achr9P08220_001 | Banana | mitochondrion | 30.65 | 12.76 |
| CDX91320 | Canola | extracellular | 2.24 | 10.0 |
| CDY05811 | Canola | cytosol | 2.68 | 9.3 |
| CDY69908 | Canola | plastid | 2.01 | 7.63 |
| CDY08643 | Canola | mitochondrion, nucleus | 1.12 | 4.07 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G231900.1 | EnsemblPlantsGene:TraesCS4A01G231900 | InterPro:DUF936_pln | PANTHER:PTHR31928 | PANTHER:PTHR31928:SF8 | PFAM:PF06075 |
| SEG:seg | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr4A:-:541426996..541430264
Molecular Weight (calculated)
47944.7 Da
IEP (calculated)
10.209
GRAVY (calculated)
-0.547
Length
447 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKPKRSNQP SHRRLESLDV KRSSSSLNMS TSSLRSINEE DRGPAAAHSG RRPTVVRFAP TPTPPRPSSS SPAESAPKAT RRSWGCTGSP RDQKERETGD
101: VIGQERSKGT AATLVRSSSV PRSRKPVEEK PLQKRESKTN IISRTKQRPT PSPKPDILHK PGAQRSPSIA AKTSEKRPPT PGGASPDDMV KVSPPRSTSA
201: TTMGASWESL PPALQTLGSG VMSYRDAAEM AAVEAMQEAS AAEIVLRCLS AFADLAATAG KQSPQQTVDE FLALQAAIAR STAALGNQQR SGHAGEWMHA
301: AVTADLAPFS LYTAPSSSRK RGTESPAVSA SPRTVAAAEE AATWLETAAR ELGEEMCAWF VGHVDRLLEA DVAGTLGQLK RVNDWLDDVG PRTDAVERLK
401: QKIFGYLLDH VESAVVALNG GVATNRRICC AGAKLKCTQM IMPHIWY
101: VIGQERSKGT AATLVRSSSV PRSRKPVEEK PLQKRESKTN IISRTKQRPT PSPKPDILHK PGAQRSPSIA AKTSEKRPPT PGGASPDDMV KVSPPRSTSA
201: TTMGASWESL PPALQTLGSG VMSYRDAAEM AAVEAMQEAS AAEIVLRCLS AFADLAATAG KQSPQQTVDE FLALQAAIAR STAALGNQQR SGHAGEWMHA
301: AVTADLAPFS LYTAPSSSRK RGTESPAVSA SPRTVAAAEE AATWLETAAR ELGEEMCAWF VGHVDRLLEA DVAGTLGQLK RVNDWLDDVG PRTDAVERLK
401: QKIFGYLLDH VESAVVALNG GVATNRRICC AGAKLKCTQM IMPHIWY
001: MANLVPGVLL KLLQHMNTDV KIAGEHRSSL LQVISIVPAL AGGELFPNQG FYLKVSDSSH ATYVSLPDEH DDLILSDKIQ LGQYIHVDRV ESSSPVPILR
101: GVRPVPGRHP CVGDPEDIVA THSLGFLSDD KVKNDNNGGV SSKPKERVKA SVKANGSGSD GERIIGNRLS VSISRDDSSD GKKPVSALFR AKSAKSSLSL
201: DVKKESLGKL KTSSGSKSIP SSPTSCYSLP NSFAKFANGI KQQQTVKPKL LEKGSPRMGL SEKGRSLLKA ESPKVGKKLP MIKNFVQGIE FGAKALRKSW
301: EGNLDIRGSD RTKSSLPRRD LTPDSRSLAA PRRSTSSEKL PSKQERANVF ARSSKEHNKI QSTKKVEPTA VLDTKDKTSR PKSTSVEKKS VAENGLPGNL
401: VKVSVNGKRL AAANIQWSSL PPSLSRMGQE VLRHREAAQV VAIEALQEAS ASESLLQCLI MYSDLLSTAK EDDPLPVVEQ FLKLHSGLKN VQVITESLSK
501: LLSLMSSPDN EENRSEEAIK AASEKQKLAA SWVQAALVTN LSPFSVYSSK QAKLAASRSK PVIILESPGN NSSSKTRGNI QNKPTIGSKL VAQGMIRKHR
601: ENSSSQKATS VAGSESPPLN WVKGNGLNEA TDLAEKLQMV SQDWFLGFVE RFLDADVITS SSLSLSDNGQ IAGMLSQLKS VNDWLDEIGS KEDEEGLQEV
701: SKETIDRLRK KIYEYLLTHV ESAAAALGGG GGSVSSPRPK PIETKAKR
101: GVRPVPGRHP CVGDPEDIVA THSLGFLSDD KVKNDNNGGV SSKPKERVKA SVKANGSGSD GERIIGNRLS VSISRDDSSD GKKPVSALFR AKSAKSSLSL
201: DVKKESLGKL KTSSGSKSIP SSPTSCYSLP NSFAKFANGI KQQQTVKPKL LEKGSPRMGL SEKGRSLLKA ESPKVGKKLP MIKNFVQGIE FGAKALRKSW
301: EGNLDIRGSD RTKSSLPRRD LTPDSRSLAA PRRSTSSEKL PSKQERANVF ARSSKEHNKI QSTKKVEPTA VLDTKDKTSR PKSTSVEKKS VAENGLPGNL
401: VKVSVNGKRL AAANIQWSSL PPSLSRMGQE VLRHREAAQV VAIEALQEAS ASESLLQCLI MYSDLLSTAK EDDPLPVVEQ FLKLHSGLKN VQVITESLSK
501: LLSLMSSPDN EENRSEEAIK AASEKQKLAA SWVQAALVTN LSPFSVYSSK QAKLAASRSK PVIILESPGN NSSSKTRGNI QNKPTIGSKL VAQGMIRKHR
601: ENSSSQKATS VAGSESPPLN WVKGNGLNEA TDLAEKLQMV SQDWFLGFVE RFLDADVITS SSLSLSDNGQ IAGMLSQLKS VNDWLDEIGS KEDEEGLQEV
701: SKETIDRLRK KIYEYLLTHV ESAAAALGGG GGSVSSPRPK PIETKAKR
Arabidopsis Description
At1g08760 [Source:UniProtKB/TrEMBL;Acc:Q9FRR2]
SUBAcon: [plastid,vacuole,cytosol]
SUBAcon: [plastid,vacuole,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.