Factsheet for GSMUA_Achr9P08220_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 4
plastid 2
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY05811	Canola	cytosol	7.64	63.57
CDX91320	Canola	extracellular	5.59	60.0
GSMUA_Achr11P...	Banana	cytosol, extracellular, nucleus	20.02	51.31
GSMUA_Achr5P25710_001	Banana	cytosol, plasma membrane, plastid	34.82	50.75
GSMUA_Achr3P21570_001	Banana	extracellular, peroxisome, plastid	33.71	48.79
CDY08643	Canola	mitochondrion, nucleus	5.59	48.78
GSMUA_Achr11P...	Banana	cytosol, nucleus, plastid	13.87	48.69
GSMUA_Achr11P...	Banana	plastid	31.94	48.58
VIT_05s0102g01200.t01	Wine grape	endoplasmic reticulum, extracellular, nucleus	32.68	47.5
CDY22665	Canola	extracellular, nucleus, peroxisome	26.16	44.75
CDY69908	Canola	plastid	4.84	44.07
CDY06329	Canola	extracellular, nucleus, peroxisome	25.51	43.84
Solyc06g073110.2.1	Tomato	endoplasmic reticulum, extracellular, nucleus	30.45	43.78
KRH29601	Soybean	nucleus	29.52	42.72
Bra031640.1-P	Field mustard	cytosol, nucleus, peroxisome	27.19	42.2
KRH23226	Soybean	nucleus	29.52	42.04
KRH24591	Soybean	nucleus	28.96	41.91
CDX95036	Canola	extracellular, nucleus, vacuole	28.21	41.22
KRH10106	Soybean	nucleus	29.52	41.17
AT1G08760.1	Thale cress	cytosol, plastid, vacuole	28.58	41.04
Bra018603.1-P	Field mustard	cytosol, nucleus, vacuole	28.03	40.9
CDX93540	Canola	extracellular, nucleus, vacuole	28.03	40.9
GSMUA_Achr1P21840_001	Banana	extracellular	16.76	33.64
GSMUA_Achr4P10950_001	Banana	cytosol, mitochondrion, nucleus	16.95	31.11
GSMUA_Achr4P03420_001	Banana	cytosol	17.13	31.08
TraesCS4A01G231900.1	Wheat	nucleus, plastid	12.76	30.65
TraesCS4D01G082000.1	Wheat	nucleus, plastid	13.04	29.91
HORVU4Hr1G014370.1	Barley	nucleus, plastid	12.94	29.83
TraesCS4B01G084100.1	Wheat	nucleus, plastid	12.76	29.46
GSMUA_Achr7P21900_001	Banana	mitochondrion	18.06	28.2
KXG28276	Sorghum	plastid	12.85	27.99
GSMUA_Achr8P14440_001	Banana	mitochondrion	13.22	27.63
GSMUA_Achr4P10330_001	Banana	mitochondrion	18.62	27.43
GSMUA_Achr9P00810_001	Banana	cytosol, mitochondrion, nucleus	13.04	24.82

Protein Annotations

EnsemblPlants:GSMUA_Achr9P08220_001	EnsemblPlants:GSMUA_Achr9T08220_001	EnsemblPlantsGene:GSMUA_Achr9G08220_001	InterPro:DUF936_pln	InterPro:GH116_N	KEGG:00511+3.2.1.45
KEGG:00600+3.2.1.45	ncoils:Coil	PANTHER:PTHR31928	PANTHER:PTHR31928:SF4	PFAM:PF06075	PFAM:PF12215
SEG:seg	UniParc:UPI0002961FD1	UniProt:M0TYI1	MapMan:20.1.5.4.2	:	:

Description

Putative expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr9G08220_001]

Coordinates

chr9:+:5245095..5262064

Molecular Weight (calculated)

116174.0 Da

IEP (calculated)

8.979

GRAVY (calculated)

-0.322

Length

1074 amino acids

Sequence
(BLAST)

0001: MICICSHVRR RQGMTNLICY SEMAAVLVPG VLLKLLRHMN ADAKVGVEHC SSVLQVVSIV PALAGGELYP NQGFYLRVSD SSHATFVSLP DEQVDLILSD
0101: EIQLGQFIHV DRLEAASPVP ILRGVMPLPG RHPFVGNPQD LVATCSSGLL GSEKSKVSHG CSGNANDDLL SAKEKNKSGK LEDVSKVVVV EKKKSSFSRS
0201: SSSLSKQLTS SDVEKKEVHH VRSRSLNLRS VPSSPSDCFP SPVSEKLHSE VTQQAKVNVP EKTSPSRFGL LGRAASVLKA TTAGRKSSAG TLIGNLVPAF
0301: KSGSKVLRKS WEENMELKDR DNSTPRATKK EIKPETRSIS APRKNTLTTE RLSHKEDSKV QTTGKKGKVD ADLEDHDKSI KQQPAVKKTS VSSCNLTPES
0401: SSTFVPSNVS WASLPSSLAK LGKEVLEYRD AAQRAAIEAL QEASAAETLI QCMSMYAELR SSAEDDNPQQ AVEQFFALFG TLTRAGLVAD SLFKLAVTSP
0501: TDPLGGDPTM EEALRVSGVH RKLAAAWIHT AIATDLSAFS LYGPGASPSK HRGTTVSVVL EAPRKPASPL KPTSSSTSSA PTAVSQIKQR SSASIQKPRA
0601: PPPLPPPREW VSGQGVAEVA AVGRALRREV RGWFLGFVER FLDADAAAAD GPRDRDLVAG TLSQLKRVND WLDGVGERGG DGMAEDGGVP PETIERLRRK
0701: IFDYLIAHVE SAAVALGGGR HGVPASSSSR TSSVDRIKMS ENGNTKRMKD PLLSDPHSRA DDLLVNHDNG QPPSLTWQRK VNDKGHQLSE FTLTMREKLK
0801: LAPLGIRLGR QIVEDIARGQ VAVIDPLKKR IGMSCQGVPL GGIGVGSIGR SYRGDFQRWQ LFPGVCEDKS VLANQFSVFI SRSDGKKYST VLSPRNPELI
0901: KQNSISGVGS WDWNLDGKNT TYHALYPRAW TIYDGEPDPD LKIVCCQISP FIPHNYKESS YPVAVFTFTL TNLAKIAAEV TLLFTWANSV GGTSEFSGYH
1001: SNSKMVEKDG VRGVLLHHRT DDGLPPVTFA IAAEETADVH VSECPCFMIS GDSDAFTAKD MWSAIKEVLF GSLK

Best Arabidopsis Sequence Match ( AT1G08760.1 )
(BLAST)

001: MANLVPGVLL KLLQHMNTDV KIAGEHRSSL LQVISIVPAL AGGELFPNQG FYLKVSDSSH ATYVSLPDEH DDLILSDKIQ LGQYIHVDRV ESSSPVPILR
101: GVRPVPGRHP CVGDPEDIVA THSLGFLSDD KVKNDNNGGV SSKPKERVKA SVKANGSGSD GERIIGNRLS VSISRDDSSD GKKPVSALFR AKSAKSSLSL
201: DVKKESLGKL KTSSGSKSIP SSPTSCYSLP NSFAKFANGI KQQQTVKPKL LEKGSPRMGL SEKGRSLLKA ESPKVGKKLP MIKNFVQGIE FGAKALRKSW
301: EGNLDIRGSD RTKSSLPRRD LTPDSRSLAA PRRSTSSEKL PSKQERANVF ARSSKEHNKI QSTKKVEPTA VLDTKDKTSR PKSTSVEKKS VAENGLPGNL
401: VKVSVNGKRL AAANIQWSSL PPSLSRMGQE VLRHREAAQV VAIEALQEAS ASESLLQCLI MYSDLLSTAK EDDPLPVVEQ FLKLHSGLKN VQVITESLSK
501: LLSLMSSPDN EENRSEEAIK AASEKQKLAA SWVQAALVTN LSPFSVYSSK QAKLAASRSK PVIILESPGN NSSSKTRGNI QNKPTIGSKL VAQGMIRKHR
601: ENSSSQKATS VAGSESPPLN WVKGNGLNEA TDLAEKLQMV SQDWFLGFVE RFLDADVITS SSLSLSDNGQ IAGMLSQLKS VNDWLDEIGS KEDEEGLQEV
701: SKETIDRLRK KIYEYLLTHV ESAAAALGGG GGSVSSPRPK PIETKAKR

Arabidopsis Description

At1g08760 [Source:UniProtKB/TrEMBL;Acc:Q9FRR2]
SUBAcon: [plastid,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.