Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- extracellular 2
- endoplasmic reticulum 2
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX91320 | Canola | extracellular | 9.88 | 73.0 |
| Solyc06g073110.2.1 | Tomato | endoplasmic reticulum, extracellular, nucleus | 68.06 | 67.34 |
| KRH29601 | Soybean | nucleus | 65.76 | 65.5 |
| KRH24591 | Soybean | nucleus | 65.22 | 64.96 |
| KRH23226 | Soybean | nucleus | 65.22 | 63.93 |
| KRH10106 | Soybean | nucleus | 65.22 | 62.6 |
| GSMUA_Achr11P... | Banana | cytosol, extracellular, nucleus | 33.83 | 59.67 |
| CDY08643 | Canola | mitochondrion, nucleus | 9.88 | 59.35 |
| Bra031640.1-P | Field mustard | cytosol, nucleus, peroxisome | 54.13 | 57.8 |
| Bra018603.1-P | Field mustard | cytosol, nucleus, vacuole | 56.7 | 56.93 |
| AT1G08760.1 | Thale cress | cytosol, plastid, vacuole | 57.51 | 56.82 |
| CDY69908 | Canola | plastid | 8.66 | 54.24 |
| GSMUA_Achr5P25710_001 | Banana | cytosol, plasma membrane, plastid | 51.56 | 51.7 |
| Os09t0516700-01 | Rice | cytosol, extracellular, nucleus | 32.21 | 51.4 |
| GSMUA_Achr3P21570_001 | Banana | extracellular, peroxisome, plastid | 50.07 | 49.87 |
| Os08t0541500-01 | Rice | mitochondrion, peroxisome, plastid | 48.99 | 49.39 |
| EER99187 | Sorghum | cytosol, mitochondrion, nucleus | 49.12 | 48.86 |
| GSMUA_Achr11P... | Banana | plastid | 46.28 | 48.44 |
| EES14150 | Sorghum | cytosol, plasma membrane, plastid | 48.58 | 48.32 |
| TraesCS7D01G268500.2 | Wheat | cytosol, mitochondrion, nucleus | 47.77 | 48.16 |
| TraesCS7B01G166200.1 | Wheat | cytosol, mitochondrion, plastid | 47.5 | 47.89 |
| TraesCS7A01G266300.1 | Wheat | cytosol, mitochondrion, plastid | 47.36 | 47.62 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plastid | 19.62 | 47.39 |
| Zm00001d021181_P005 | Maize | cytosol, mitochondrion, nucleus | 47.63 | 47.31 |
| Zm00001d031700_P003 | Maize | cytosol, mitochondrion, plastid | 47.5 | 47.05 |
| HORVU5Hr1G079460.1 | Barley | cytosol, mitochondrion, plastid | 46.68 | 45.88 |
| TraesCS5D01G309900.1 | Wheat | cytosol, mitochondrion, plastid | 46.14 | 45.59 |
| TraesCS5B01G303400.1 | Wheat | cytosol, mitochondrion, plastid | 46.28 | 45.54 |
| TraesCS5A01G303100.1 | Wheat | cytosol, mitochondrion, plastid | 46.01 | 45.27 |
| Zm00001d006130_P001 | Maize | mitochondrion, plastid | 46.01 | 44.68 |
| VIT_09s0002g00760.t01 | Wine grape | mitochondrion | 25.98 | 36.29 |
| VIT_13s0320g00010.t01 | Wine grape | cytosol | 26.52 | 34.63 |
| GSMUA_Achr9P08220_001 | Banana | mitochondrion | 47.5 | 32.68 |
| VIT_11s0016g04380.t01 | Wine grape | plastid | 30.45 | 31.69 |
| TraesCS4D01G082000.1 | Wheat | nucleus, plastid | 19.49 | 30.77 |
| TraesCS4A01G231900.1 | Wheat | nucleus, plastid | 18.54 | 30.65 |
| HORVU4Hr1G014370.1 | Barley | nucleus, plastid | 19.22 | 30.47 |
| TraesCS4B01G084100.1 | Wheat | nucleus, plastid | 19.08 | 30.32 |
| VIT_01s0026g00030.t01 | Wine grape | mitochondrion | 23.82 | 29.73 |
| KXG28276 | Sorghum | plastid | 19.35 | 29.01 |
Protein Annotations
| ArrayExpress:VIT_05s0102g01200 | EMBL:AM427545 | EMBL:FN596500 | EnsemblPlants:VIT_05s0102g01200.t01 | EnsemblPlantsGene:VIT_05s0102g01200 | EntrezGene:104879471 |
| InterPro:DUF936_pln | PANTHER:PTHR31928 | PANTHER:PTHR31928:SF4 | PFAM:PF06075 | ProteinID:CAN75715 | ProteinID:CAN75715.1 |
| ProteinID:CBI36728 | ProteinID:CBI36728.3 | RefSeq:XP_010650628.1 | RefSeq:XP_010650629.1 | RefSeq:XP_010650630.1 | SEG:seg |
| unigene:Vvi.3033 | UniParc:UPI000151E953 | UniProt:A5AIH8 | MapMan:20.1.5.4.2 | : | : |
Description
No Description!
Coordinates
chr5:-:23339716..23346495
Molecular Weight (calculated)
79968.9 Da
IEP (calculated)
10.170
GRAVY (calculated)
-0.561
Length
739 amino acids
Sequence
(BLAST)
(BLAST)
001: MATLVPGVLL KLLQHMNTDI KIAGEYRSSL LQVVSIVPAL AGGELFPNQG FYLKVSDSSH ATYVSLPDEH DDLILSDKIQ LGQFIHVERL EAASPVPILH
101: GVRPVPGRHP CVGSPEDIVA THSLGFLNNS SLGLKHVEKV KSPSKVLSNN HVGDKEKCTA VRSNGIGKDE QGDKKTPSLS RSKSQLSKQS LNVVIDKKET
201: LARLKSSNSR SIPSSPTSCY SLPTSFEKFA NGFKQQAKIK GERATAKPGL VEKASSVRGL SPTRKKVPVS LLRNAVHGIE LGPKALRKSW EGSIEVKNRE
301: TSKPRATKHE LKPETRSSSV PRKNLLSDRL PSKEESKVRM STQSSKDDSK AQMSIKKMNG NGALDDVEKS NKQRSAVGKK SSEVNNHGLP GNLVKVFPNS
401: KRLTEGSVSW SSLPSSLAKL GKEVLKHRDA AQISAIEAMQ EASAAESLLR CLSTYSELSS TAKEDNPQPA VEQFLTLHAS LNNARLVADS LSKTIPVGSS
501: PDHEENPSEE ALKITSDRRK QAASWAHAAL ATNLSSFSVF RKESTLGLAP SQNQKTLAGN QPMLVLENSV KNASTKTQTK ARQTVGSKLA APGTPRRPGD
601: GPTASQKPRP PPPTEWIRGN GLDEAIDLAE MLRMESQDWF LGFVERFLDA DVDISALSDN GQIAGMLTQL KSVNDWLDEI GSSKDEGDTP HISAETIDRL
701: RKKIYEYLLT HVESAAAALG GGGSQPSPPT RTTESKTRR
101: GVRPVPGRHP CVGSPEDIVA THSLGFLNNS SLGLKHVEKV KSPSKVLSNN HVGDKEKCTA VRSNGIGKDE QGDKKTPSLS RSKSQLSKQS LNVVIDKKET
201: LARLKSSNSR SIPSSPTSCY SLPTSFEKFA NGFKQQAKIK GERATAKPGL VEKASSVRGL SPTRKKVPVS LLRNAVHGIE LGPKALRKSW EGSIEVKNRE
301: TSKPRATKHE LKPETRSSSV PRKNLLSDRL PSKEESKVRM STQSSKDDSK AQMSIKKMNG NGALDDVEKS NKQRSAVGKK SSEVNNHGLP GNLVKVFPNS
401: KRLTEGSVSW SSLPSSLAKL GKEVLKHRDA AQISAIEAMQ EASAAESLLR CLSTYSELSS TAKEDNPQPA VEQFLTLHAS LNNARLVADS LSKTIPVGSS
501: PDHEENPSEE ALKITSDRRK QAASWAHAAL ATNLSSFSVF RKESTLGLAP SQNQKTLAGN QPMLVLENSV KNASTKTQTK ARQTVGSKLA APGTPRRPGD
601: GPTASQKPRP PPPTEWIRGN GLDEAIDLAE MLRMESQDWF LGFVERFLDA DVDISALSDN GQIAGMLTQL KSVNDWLDEI GSSKDEGDTP HISAETIDRL
701: RKKIYEYLLT HVESAAAALG GGGSQPSPPT RTTESKTRR
001: MANLVPGVLL KLLQHMNTDV KIAGEHRSSL LQVISIVPAL AGGELFPNQG FYLKVSDSSH ATYVSLPDEH DDLILSDKIQ LGQYIHVDRV ESSSPVPILR
101: GVRPVPGRHP CVGDPEDIVA THSLGFLSDD KVKNDNNGGV SSKPKERVKA SVKANGSGSD GERIIGNRLS VSISRDDSSD GKKPVSALFR AKSAKSSLSL
201: DVKKESLGKL KTSSGSKSIP SSPTSCYSLP NSFAKFANGI KQQQTVKPKL LEKGSPRMGL SEKGRSLLKA ESPKVGKKLP MIKNFVQGIE FGAKALRKSW
301: EGNLDIRGSD RTKSSLPRRD LTPDSRSLAA PRRSTSSEKL PSKQERANVF ARSSKEHNKI QSTKKVEPTA VLDTKDKTSR PKSTSVEKKS VAENGLPGNL
401: VKVSVNGKRL AAANIQWSSL PPSLSRMGQE VLRHREAAQV VAIEALQEAS ASESLLQCLI MYSDLLSTAK EDDPLPVVEQ FLKLHSGLKN VQVITESLSK
501: LLSLMSSPDN EENRSEEAIK AASEKQKLAA SWVQAALVTN LSPFSVYSSK QAKLAASRSK PVIILESPGN NSSSKTRGNI QNKPTIGSKL VAQGMIRKHR
601: ENSSSQKATS VAGSESPPLN WVKGNGLNEA TDLAEKLQMV SQDWFLGFVE RFLDADVITS SSLSLSDNGQ IAGMLSQLKS VNDWLDEIGS KEDEEGLQEV
701: SKETIDRLRK KIYEYLLTHV ESAAAALGGG GGSVSSPRPK PIETKAKR
101: GVRPVPGRHP CVGDPEDIVA THSLGFLSDD KVKNDNNGGV SSKPKERVKA SVKANGSGSD GERIIGNRLS VSISRDDSSD GKKPVSALFR AKSAKSSLSL
201: DVKKESLGKL KTSSGSKSIP SSPTSCYSLP NSFAKFANGI KQQQTVKPKL LEKGSPRMGL SEKGRSLLKA ESPKVGKKLP MIKNFVQGIE FGAKALRKSW
301: EGNLDIRGSD RTKSSLPRRD LTPDSRSLAA PRRSTSSEKL PSKQERANVF ARSSKEHNKI QSTKKVEPTA VLDTKDKTSR PKSTSVEKKS VAENGLPGNL
401: VKVSVNGKRL AAANIQWSSL PPSLSRMGQE VLRHREAAQV VAIEALQEAS ASESLLQCLI MYSDLLSTAK EDDPLPVVEQ FLKLHSGLKN VQVITESLSK
501: LLSLMSSPDN EENRSEEAIK AASEKQKLAA SWVQAALVTN LSPFSVYSSK QAKLAASRSK PVIILESPGN NSSSKTRGNI QNKPTIGSKL VAQGMIRKHR
601: ENSSSQKATS VAGSESPPLN WVKGNGLNEA TDLAEKLQMV SQDWFLGFVE RFLDADVITS SSLSLSDNGQ IAGMLSQLKS VNDWLDEIGS KEDEEGLQEV
701: SKETIDRLRK KIYEYLLTHV ESAAAALGGG GGSVSSPRPK PIETKAKR
Arabidopsis Description
At1g08760 [Source:UniProtKB/TrEMBL;Acc:Q9FRR2]
SUBAcon: [plastid,vacuole,cytosol]
SUBAcon: [plastid,vacuole,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.