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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:
  • nucleus 2
  • mitochondrion 3
  • plastid 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, mitochondrion, plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:mitochondrion
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5D01G309900.1 Wheat cytosol, mitochondrion, plastid 96.28 96.79
TraesCS5B01G303400.1 Wheat cytosol, mitochondrion, plastid 96.01 96.14
TraesCS5A01G303100.1 Wheat cytosol, mitochondrion, plastid 95.35 95.47
Os09t0516700-01 Rice cytosol, extracellular, nucleus 49.6 80.56
EER99187 Sorghum cytosol, mitochondrion, nucleus 78.32 79.27
Zm00001d021181_P005 Maize cytosol, mitochondrion, nucleus 77.39 78.23
Zm00001d006130_P001 Maize mitochondrion, plastid 74.47 73.59
CDY05811 Canola cytosol 10.77 62.79
CDX91320 Canola extracellular 7.98 60.0
GSMUA_Achr5P25710_001 Banana cytosol, plasma membrane, plastid 54.26 55.36
GSMUA_Achr11P... Banana cytosol, extracellular, nucleus 30.72 55.13
GSMUA_Achr3P21570_001 Banana extracellular, peroxisome, plastid 51.99 52.7
GSMUA_Achr11P... Banana cytosol, nucleus, plastid 21.01 51.63
GSMUA_Achr11P... Banana plastid 47.21 50.28
CDY08643 Canola mitochondrion, nucleus 8.11 49.59
CDY22665 Canola extracellular, nucleus, peroxisome 41.09 49.2
CDY06329 Canola extracellular, nucleus, peroxisome 39.23 47.2
VIT_05s0102g01200.t01 Wine grape endoplasmic reticulum, extracellular, nucleus 45.88 46.68
KRH24591 Soybean nucleus 45.21 45.82
Solyc06g073110.2.1 Tomato endoplasmic reticulum, extracellular, nucleus 45.21 45.52
KRH29601 Soybean nucleus 44.81 45.42
Bra031640.1-P Field mustard cytosol, nucleus, peroxisome 40.96 44.51
CDX95036 Canola extracellular, nucleus, vacuole 42.42 43.4
Bra018603.1-P Field mustard cytosol, nucleus, vacuole 41.76 42.66
CDX93540 Canola extracellular, nucleus, vacuole 41.76 42.66
KRH23226 Soybean nucleus 42.69 42.57
AT1G08760.1 Thale cress cytosol, plastid, vacuole 42.29 42.51
CDY69908 Canola plastid 6.65 42.37
KRH10106 Soybean nucleus 42.29 41.3
HORVU4Hr1G014370.1 Barley nucleus, plastid 19.02 30.69
HORVU4Hr1G077070.1 Barley cytosol 22.07 28.14
HORVU4Hr1G024210.1 Barley mitochondrion 26.33 27.85
HORVU4Hr1G024120.1 Barley plastid 26.33 26.12
HORVU2Hr1G035200.1 Barley plastid 12.5 24.23
HORVU3Hr1G000140.4 Barley plastid 19.28 23.16
Protein Annotations
EnsemblPlants:HORVU5Hr1G079460.1EnsemblPlantsGene:HORVU5Hr1G079460InterPro:DUF936_plnPANTHER:PTHR31928PANTHER:PTHR31928:SF11PFAM:PF06075
SEG:segUniParc:UPI0002951576UniProt:M0WZS8MapMan:20.1.5.4.2::
Description
No Description!
Coordinates
chrchr5H:+:556970322..556977163
Molecular Weight (calculated)
79270.9 Da
IEP (calculated)
10.336
GRAVY (calculated)
-0.434
Length
752 amino acids
Sequence
(BLAST)
001: MASLVPGVLV KLLQHMNTDV KVAGEHRSSL LQVVSIVPAL SGSDLFTNQG FYLKVSDSSH ATYVTLPEEQ HDLILSDKIQ LGQFIHVDRL EAATPVPILW
101: GVRPVPGRHP CVGNPEDLVL TSSSKVVGSK KAQPANGSKT TNGLKDAGAL SLEKEKSKLE KINAPHKTIG TENKKPVLTK SKSSLSKQAL NGVTEKKETV
201: KPKARPARVR STPSSPTSVY SLPGTFDRFS SDLRQRHGVK GPEKASSSRL SLLERAASVL KVTTAGRRSS AVNSISSSVL GIGSGPKALR RSWEGAVDTK
301: GKNSSDSKTT KADRKPENRG PTTPRRKLPV DEKVSHKDDS KTHNPARKST SSAPAPSVDA DKAPKKHPPT LKRTSGGLSN PNVTNLVKIP PNSKKLTDVS
401: NSWTSLPPSL AKLGKELLKY RESAQVAAVE AMQEASAAES LLRCLSSYAE VSSTAEEQNP QPTVEQFLAL HSSLTRATVI TDTLTKSAAP PECSAASDAG
501: TVVSATDDEA AAAVAAERQR RAKSWVNAAL ATDLSGFGLY NLKPVPATVS SPLAVLVVDE SVKPVAASPN AVKTLSPAAK SRMSPAKGKP RTGPGATAAV
601: ATPAPPEWER GVGAEERGQL ARRLGEESRG WFLGFVERFL DADVAAAAPW DRERAARMLP QLKRVNDWLG EIGTRGEAPP PPPESQDGDE EAAATTAAAV
701: ASANGCGVPE ETIERLRKKI YEFLLTNVDS AAAVLGGAAV PPAPAPASGK KS
Best Arabidopsis Sequence Match ( AT1G08760.1 )
(BLAST)
001: MANLVPGVLL KLLQHMNTDV KIAGEHRSSL LQVISIVPAL AGGELFPNQG FYLKVSDSSH ATYVSLPDEH DDLILSDKIQ LGQYIHVDRV ESSSPVPILR
101: GVRPVPGRHP CVGDPEDIVA THSLGFLSDD KVKNDNNGGV SSKPKERVKA SVKANGSGSD GERIIGNRLS VSISRDDSSD GKKPVSALFR AKSAKSSLSL
201: DVKKESLGKL KTSSGSKSIP SSPTSCYSLP NSFAKFANGI KQQQTVKPKL LEKGSPRMGL SEKGRSLLKA ESPKVGKKLP MIKNFVQGIE FGAKALRKSW
301: EGNLDIRGSD RTKSSLPRRD LTPDSRSLAA PRRSTSSEKL PSKQERANVF ARSSKEHNKI QSTKKVEPTA VLDTKDKTSR PKSTSVEKKS VAENGLPGNL
401: VKVSVNGKRL AAANIQWSSL PPSLSRMGQE VLRHREAAQV VAIEALQEAS ASESLLQCLI MYSDLLSTAK EDDPLPVVEQ FLKLHSGLKN VQVITESLSK
501: LLSLMSSPDN EENRSEEAIK AASEKQKLAA SWVQAALVTN LSPFSVYSSK QAKLAASRSK PVIILESPGN NSSSKTRGNI QNKPTIGSKL VAQGMIRKHR
601: ENSSSQKATS VAGSESPPLN WVKGNGLNEA TDLAEKLQMV SQDWFLGFVE RFLDADVITS SSLSLSDNGQ IAGMLSQLKS VNDWLDEIGS KEDEEGLQEV
701: SKETIDRLRK KIYEYLLTHV ESAAAALGGG GGSVSSPRPK PIETKAKR
Arabidopsis Description
At1g08760 [Source:UniProtKB/TrEMBL;Acc:Q9FRR2]
SUBAcon: [plastid,vacuole,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.