Factsheet for HORVU4Hr1G024210.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	mitochondrion
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G123300.1	Wheat	mitochondrion	93.67	94.87
TraesCS4A01G192100.1	Wheat	mitochondrion	94.09	94.49
HORVU4Hr1G024120.1	Barley	plastid	100.0	93.8
TraesCS4D01G121400.1	Wheat	mitochondrion	93.95	92.52
Os12t0120000-01	Rice	cytosol, mitochondrion, nucleus	76.93	77.26
Os11t0120200-01	Rice	cytosol, mitochondrion, nucleus	76.93	77.26
EES09151	Sorghum	cytosol, mitochondrion, plastid	72.71	71.41
Zm00001d052368_P001	Maize	cytosol, mitochondrion, plastid	71.03	69.08
GSMUA_Achr7P21900_001	Banana	mitochondrion	49.23	50.87
GSMUA_Achr4P10330_001	Banana	mitochondrion	50.07	48.83
KRH03797	Soybean	mitochondrion	44.73	45.17
Bra032701.1-P	Field mustard	mitochondrion	39.52	44.6
CDY01127	Canola	mitochondrion	39.24	44.29
AT4G13370.1	Thale cress	endoplasmic reticulum, mitochondrion	41.91	44.28
CDY69222	Canola	mitochondrion, plastid	26.3	44.1
PGSC0003DMT400001026	Potato	mitochondrion	42.05	43.46
CDY64935	Canola	mitochondrion	39.8	43.27
Solyc12g007020.1.1	Tomato	mitochondrion	41.63	43.21
VIT_11s0016g04380.t01	Wine grape	plastid	43.04	43.1
Bra034878.1-P	Field mustard	mitochondrion	39.38	42.88
CDY43695	Canola	mitochondrion	39.38	42.17
KRH56681	Soybean	vacuole	44.02	38.08
HORVU5Hr1G079460.1	Barley	cytosol, mitochondrion, plastid	27.85	26.33
HORVU4Hr1G077070.1	Barley	cytosol	18.42	22.2
HORVU4Hr1G014370.1	Barley	nucleus, plastid	13.22	20.17
HORVU2Hr1G035200.1	Barley	plastid	10.55	19.33
HORVU3Hr1G000140.4	Barley	plastid	16.74	19.01

Protein Annotations

EnsemblPlants:HORVU4Hr1G024210.1	EnsemblPlantsGene:HORVU4Hr1G024210	InterPro:DUF936_pln	PANTHER:PTHR31928	PANTHER:PTHR31928:SF3	PFAM:PF06075
SEG:seg	UniParc:UPI0002956DCB	UniProt:M0WYV2	MapMan:20.1.5.4.2	:	:

Description

No Description!

Coordinates

chrchr4H:+:137001628..137004640

Molecular Weight (calculated)

74862.5 Da

IEP (calculated)

10.531

GRAVY (calculated)

-0.287

Length

711 amino acids

Sequence
(BLAST)

001: MATVTPGVLL RLLQAMHTDE RVTGEHRSPA LQVTAVVPAL TASTADSLLC PSNGFLLQLS DGLHSTYVQP SPADADALLS VRPHIVGHLV HLDRLRFASP
101: VPRAVGLRPV PSSRSLPCVG NPEPLIVRSA ACSRGYVIRP DSSPDAAPPL MPSGSSAAPL SDATDAAAKR AVLAPRNGPE AAALPGGSAA KRRFSSPAPA
201: KQRDPSPAVK GASRAASPSV KGASRASSPA VRGTSRSSSP APSKCVVPSL VAAKEENRRA AKEPAIIVPS RYRQPSPAGG RRGAGSPGGG GRRGSLSPGS
301: RRLSGEGGSK KKVGVLVSGI SKMTDLGSGS AMKPVRKSWD ESAMALAAAA AGTVKKSKVK VDRDTILRTQ EAMSRRLSDA TAELSSNDDS SVDEKPKPPK
401: KTVSSAMKAK TAAPKIILHD AKWTDGSIPL VAVSDKLSKI GKEATERRDA AATAAADALQ EALITDSVIR NLSKFSELCS LSKTANPLPT VDCFLAVYED
501: TFKWKKTAES MATTNGADEA ALWEKSATHW VEAALATELE VLKLVNSATG SIYQKKITEK TKAPPAVEPP RTGMSKRPSL GASAKVQSRV SPLPSAAWPK
601: TPGMNETVEL ANTLCREMHV WFLKFVNEAM DVGFHLFEDQ NMVTRGKQSG HITVVLSQFK KISDWLDGVG KVADEDATKE TVERLKRKIY QFVISRMGSA
701: FETSVSVSAK S

Best Arabidopsis Sequence Match ( AT4G13370.1 )
(BLAST)

001: MASLAPGILL KLLQCMNSGT RPTGDHRSAI LQVTGIVPAL AGSDLWPNQG FYVQISDSLN STYVSLSERD TDLILSNRLQ LGQFIYLERL EFATPVPRAA
101: GIRPVAGRHA FVGKPEPLIA RVSNGSKRDF VIQPVSDSEY SLDPIAVYLN NRRIDDDGDS DVKPNVRQAL APVNQNEENR NQIRNQKPKT TPQRFSSPAS
201: SKRSVSSGKK NCSGAVAVTV ERDPSPVVSG KGRRSASPVP SKCVVPSLAA AREENRKVAR EPSIVVPSRY RQPSPNGRKM NPSPSGRRMS ISPGRRLSSG
301: LKMTPMVGDS SGKKKMAVIA AGISKVSEAL VGSSAKNGNR KNWEEPLAGD GSAKNKPDHQ AILRTQAAMT RRLSDANRRK SGSSSSVCEE KAKSCSSESS
401: LLEEVSAFEG LGITYHERKW TDGSVPLDSI SDELAKLGKE AMKRRDFAAK AAARALEEAN ANECIIRCLS KFSELSSASK VGNPLRIINE FLKIYEDVMK
501: YSKIASENSF SLSSDQQNPI SLWVEAALAT NLEVVSLVKS HESPSSLKKS MPTRLSPRPS SKTDNIVGMW TDLDGLKETA KFAVNLQSEM QVWFIEFVEE
601: SLDNKNAAKR SLDGSSIAAV LSQLKQVNEW LDRVSSNQEN KITTMDKIER LKRKIYGFVI HHVGSTYDNS ASS

Arabidopsis Description

At4g13370 [Source:UniProtKB/TrEMBL;Acc:Q9T0K8]
SUBAcon: [mitochondrion,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.