Factsheet for Zm00001d052368_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

mitochondrion 2
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, plastid
Any Predictor:	cytosol, mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES09151	Sorghum	cytosol, mitochondrion, plastid	86.05	86.88
Os11t0120200-01	Rice	cytosol, mitochondrion, nucleus	70.18	72.46
Os12t0120000-01	Rice	cytosol, mitochondrion, nucleus	69.9	72.18
TraesCS4B01G123300.1	Wheat	mitochondrion	69.08	71.94
TraesCS4A01G192100.1	Wheat	mitochondrion	69.22	71.47
HORVU4Hr1G024210.1	Barley	mitochondrion	69.08	71.03
TraesCS4D01G121400.1	Wheat	mitochondrion	69.36	70.22
HORVU4Hr1G024120.1	Barley	plastid	69.08	66.62
GSMUA_Achr7P21900_001	Banana	mitochondrion	47.2	50.15
GSMUA_Achr4P10330_001	Banana	mitochondrion	48.02	48.15
VIT_11s0016g04380.t01	Wine grape	plastid	42.41	43.66
KRH03797	Soybean	mitochondrion	41.59	43.18
Bra032701.1-P	Field mustard	mitochondrion	36.8	42.7
CDY01127	Canola	mitochondrion	36.53	42.38
CDY69222	Canola	mitochondrion, plastid	24.35	41.98
PGSC0003DMT400001026	Potato	mitochondrion	39.4	41.86
AT4G13370.1	Thale cress	endoplasmic reticulum, mitochondrion	38.44	41.75
Solyc12g007020.1.1	Tomato	mitochondrion	38.99	41.61
CDY64935	Canola	mitochondrion	36.8	41.13
Bra034878.1-P	Field mustard	mitochondrion	36.25	40.58
CDY43695	Canola	mitochondrion	36.53	40.21
KRH56681	Soybean	vacuole	41.45	36.86
Zm00001d031700_P003	Maize	cytosol, mitochondrion, plastid	25.99	25.47
Zm00001d021181_P005	Maize	cytosol, mitochondrion, nucleus	24.21	23.79
Zm00001d006130_P001	Maize	mitochondrion, plastid	24.76	23.78
Zm00001d032126_P001	Maize	cytosol	7.25	22.65
Zm00001d038770_P001	Maize	cytosol	7.39	21.6
Zm00001d027907_P002	Maize	cytosol, mitochondrion, nucleus, peroxisome	10.67	21.37
Zm00001d006732_P001	Maize	plastid	18.88	21.26
Zm00001d040147_P001	Maize	nucleus	16.96	20.6
Zm00001d017634_P001	Maize	cytosol	6.98	20.48
Zm00001d012110_P001	Maize	nucleus	5.2	15.38

Protein Annotations

EnsemblPlants:Zm00001d052368_P001	EnsemblPlants:Zm00001d052368_T001	EnsemblPlantsGene:Zm00001d052368	EntrezGene:100279842	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829
GO:GO:0008017	InterPro:DUF936_pln	ncoils:Coil	PANTHER:PTHR31928	PANTHER:PTHR31928:SF3	PFAM:PF06075
ProteinID:AQK57064.1	SEG:seg	UniParc:UPI0002210E78	UniProt:K7ULT3	MapMan:20.1.5.4.2	:

Description

Expressed protein; protein

Coordinates

chr4:-:188382524..188385950

Molecular Weight (calculated)

77191.9 Da

IEP (calculated)

10.594

GRAVY (calculated)

-0.367

Length

731 amino acids

Sequence
(BLAST)

001: MATVTQGVLL RLLQAMHTEE RVAGEHRSPV LQVTGVVPAL TASTSDAPLL AAPPSNGVLL NLSDGLHSTY VQVPPADADA LLAAARPHLV GHLVHLDRLR
101: LARPVPRALG LRTVPSSRSL PCAGAPQPLV VRPAACARGY VIQPAASAAD AAPPLMPSCP TSSSDDNDAK RTVLGPKNAV ADPAPPPQQP VKRRFSSPAP
201: PSKQRDPSPA AKPAVSRASS PSVGKSASRP SSPALRSTPR ATSPAPSKCV VPSLVAAREE NRRAAREPAI IVPSRYRQPS PAGGRRGAAS PAVAGGRRAS
301: LSPSSRRLSG EGTGKKKVGV LVAGISKMTD LGSGSAAKPG RKSWDDPTRT VAATSVMKSK AKVDKDTILR TQEAMSRRLS DATTEQSSND DSSVDEKPKQ
401: PRKKIDAPTS VKAKTAAPKI TLHDPKWTDG SIPLDALPDK LSKIGKEAFE RRDSAATAAA SALQEALISE SVIRNISKFS EICASARVSN PFPTVDLFLV
501: VCEDALKWKT IAAESVVTNG AEEEELLEKK STWHWVGAAL ATDLEVLKLL NGATGPFSRT RSSGTTNKPN ASSVEPPRTA SMSSKKQAHG ASAKAQSKAA
601: AVSPSSPPRC STWNMGETAE LAKALWREMR AWFLTFVDEA LDVGFHLFED QQNVAGKGRQ HGGGHITMVL SQFKKISDWL DQVGKIAAAE EEEQRTKEKI
701: ELLKRKIYGF VISHMGSALE SPASVSVSSR S

Best Arabidopsis Sequence Match ( AT4G13370.1 )
(BLAST)

001: MASLAPGILL KLLQCMNSGT RPTGDHRSAI LQVTGIVPAL AGSDLWPNQG FYVQISDSLN STYVSLSERD TDLILSNRLQ LGQFIYLERL EFATPVPRAA
101: GIRPVAGRHA FVGKPEPLIA RVSNGSKRDF VIQPVSDSEY SLDPIAVYLN NRRIDDDGDS DVKPNVRQAL APVNQNEENR NQIRNQKPKT TPQRFSSPAS
201: SKRSVSSGKK NCSGAVAVTV ERDPSPVVSG KGRRSASPVP SKCVVPSLAA AREENRKVAR EPSIVVPSRY RQPSPNGRKM NPSPSGRRMS ISPGRRLSSG
301: LKMTPMVGDS SGKKKMAVIA AGISKVSEAL VGSSAKNGNR KNWEEPLAGD GSAKNKPDHQ AILRTQAAMT RRLSDANRRK SGSSSSVCEE KAKSCSSESS
401: LLEEVSAFEG LGITYHERKW TDGSVPLDSI SDELAKLGKE AMKRRDFAAK AAARALEEAN ANECIIRCLS KFSELSSASK VGNPLRIINE FLKIYEDVMK
501: YSKIASENSF SLSSDQQNPI SLWVEAALAT NLEVVSLVKS HESPSSLKKS MPTRLSPRPS SKTDNIVGMW TDLDGLKETA KFAVNLQSEM QVWFIEFVEE
601: SLDNKNAAKR SLDGSSIAAV LSQLKQVNEW LDRVSSNQEN KITTMDKIER LKRKIYGFVI HHVGSTYDNS ASS

Arabidopsis Description

At4g13370 [Source:UniProtKB/TrEMBL;Acc:Q9T0K8]
SUBAcon: [mitochondrion,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.