Factsheet for Zm00001d017634_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 3
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d038770_P001	Maize	cytosol	69.48	69.2
Zm00001d012110_P001	Maize	nucleus	64.26	64.78
Zm00001d032126_P001	Maize	cytosol	59.84	63.68
Zm00001d027907_P002	Maize	cytosol, mitochondrion, nucleus, peroxisome	87.95	60.0
KRG89920	Soybean	extracellular, mitochondrion	34.54	46.49
EER95393	Sorghum	cytosol	87.95	38.69
Os03t0181800-01	Rice	cytosol	77.91	33.86
TraesCS4B01G298200.1	Wheat	cytosol	75.1	31.69
TraesCS4A01G006800.1	Wheat	cytosol	74.7	31.53
TraesCS4D01G297000.1	Wheat	cytosol	74.7	31.53
HORVU4Hr1G077070.1	Barley	cytosol	74.3	31.36
PGSC0003DMT400058976	Potato	mitochondrion	40.56	19.5
Solyc03g122080.2.1	Tomato	mitochondrion	40.56	19.5
VIT_09s0002g00760.t01	Wine grape	mitochondrion	41.37	19.47
GSMUA_Achr1P21840_001	Banana	extracellular	41.77	19.44
AT3G14170.2	Thale cress	cytosol, golgi, mitochondrion, nucleus	39.36	19.37
CDY52268	Canola	mitochondrion	39.36	19.33
CDX97548	Canola	mitochondrion	39.36	19.33
Bra027368.1-P	Field mustard	mitochondrion	38.96	19.13
PGSC0003DMT400074262	Potato	cytosol	39.76	19.04
KRH47653	Soybean	endoplasmic reticulum, nucleus, peroxisome	40.56	18.88
KRH06232	Soybean	nucleus	40.16	18.73
Solyc12g049500.1.1	Tomato	cytosol	36.55	17.91
KRH69022	Soybean	golgi, mitochondrion	38.55	17.71
Zm00001d031700_P003	Maize	cytosol, mitochondrion, plastid	32.53	10.86
Zm00001d021181_P005	Maize	cytosol, mitochondrion, nucleus	30.12	10.08
Zm00001d006130_P001	Maize	mitochondrion, plastid	28.11	9.2
Zm00001d040147_P001	Maize	nucleus	22.09	9.14
Zm00001d006732_P001	Maize	plastid	22.49	8.63
Zm00001d052368_P001	Maize	cytosol, mitochondrion, plastid	20.48	6.98

Protein Annotations

EnsemblPlants:Zm00001d017634_P001	EnsemblPlants:Zm00001d017634_T001	EnsemblPlantsGene:Zm00001d017634	InterPro:DUF936_pln	PANTHER:PTHR31928	PANTHER:PTHR31928:SF2
PFAM:PF06075	ProteinID:AQK73587.1	UniParc:UPI0008459F10	UniProt:A0A1D6HG31	MapMan:20.1.5.4.2	:

Description

DUF936 family protein

Coordinates

chr5:+:202684054..202685221

Molecular Weight (calculated)

26950.3 Da

IEP (calculated)

10.424

GRAVY (calculated)

-0.510

Length

249 amino acids

Sequence
(BLAST)

001: MASLTPGILL KVLKNINSDV KVCGEYRSIL LQVISIVPAI TGSELWPDHG FFIKVSDSSH STYVSLSKED NELILSNKLQ LGQFIYVEKR KVVIKEQKTV
101: VASRYMLGVS SNNGKITSLN SSIDSDKSNG GSTISEPNKK FVAPKVRQEA KPQERPNNTS TGNTKSVSTK QEISKDTLKN GGASPSPNGC VVVKKQMPKE
201: SKKESATERR SPPKLYKSSP TPAMTSPTKL DPAAKQNGPF ASAVNQLSI

Best Arabidopsis Sequence Match ( AT3G14170.2 )
(BLAST)

001: MASLTPRVLI KLLETMNTNI KVRGEYRSVL LQVISIVPAL AGSELWPNQG FFIKVSDSSH STYVSLSNED NELILNNKLG IGQFFYVDKL DAGTPVPVLV
101: GVRPISGRHP FVGNPKDLMQ MLVPSETTPR EEEYHNQKKQ KDGARSNIVE NIRKHQPFVI KEEKTGVASR YMKGISNSKA SGSDSSSGGS NNEGETGSIM
201: VAKKVGVLAK GKQREHKDQA RQAGPLQCRP ATAPTKAEPK KLSLSSTVNY INRKSNSAED ASWSSLPVSL SKLGKGMLRR RNLAALIAAE VQREALAASH
301: LIKCISMFAE LSSNASPKNP HTSLRNFFTL QSILDQVQVT VVASKDKSFQ PVNIHSLWME PEKLSKKASL SSSRATMKPS KALTEAEKLE WVKGNGTEEI
401: KELTNTLKRE TRSWFLKFLE DALDTGLHAT VPEKKGKTKG ARLAEPDNHI AETLSQLKQA NEWLEKVKND NLSSDNSLLE NIERLKKKIY SCLLLYVDSA
501: ASAIGV

Arabidopsis Description

Plant protein of unknown function (DUF936) [Source:TAIR;Acc:AT3G14170]
SUBAcon: [mitochondrion,golgi,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.