Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, golgi, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 3
- cytosol 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra027368.1-P | Field mustard | mitochondrion | 78.66 | 78.5 |
| CDX97548 | Canola | mitochondrion | 78.46 | 78.3 |
| CDY52268 | Canola | mitochondrion | 78.26 | 78.11 |
| KRG89920 | Soybean | extracellular, mitochondrion | 22.73 | 62.16 |
| VIT_09s0002g00760.t01 | Wine grape | mitochondrion | 51.38 | 49.15 |
| Zm00001d032126_P001 | Maize | cytosol | 22.53 | 48.72 |
| PGSC0003DMT400074262 | Potato | cytosol | 48.42 | 47.12 |
| Solyc03g122080.2.1 | Tomato | mitochondrion | 47.43 | 46.33 |
| PGSC0003DMT400058976 | Potato | mitochondrion | 47.43 | 46.33 |
| Solyc12g049500.1.1 | Tomato | cytosol | 45.85 | 45.67 |
| Zm00001d038770_P001 | Maize | cytosol | 22.53 | 45.6 |
| GSMUA_Achr1P21840_001 | Banana | extracellular | 43.68 | 41.31 |
| Zm00001d027907_P002 | Maize | cytosol, mitochondrion, nucleus, peroxisome | 29.45 | 40.82 |
| Zm00001d017634_P001 | Maize | cytosol | 19.37 | 39.36 |
| EER95393 | Sorghum | cytosol | 43.48 | 38.87 |
| Os03t0181800-01 | Rice | cytosol | 42.69 | 37.7 |
| TraesCS4A01G006800.1 | Wheat | cytosol | 43.08 | 36.95 |
| TraesCS4D01G297000.1 | Wheat | cytosol | 42.89 | 36.78 |
| TraesCS4B01G298200.1 | Wheat | cytosol | 42.49 | 36.44 |
| HORVU4Hr1G077070.1 | Barley | cytosol | 42.09 | 36.1 |
| Zm00001d012110_P001 | Maize | nucleus | 13.64 | 27.94 |
| AT1G23790.1 | Thale cress | nucleus | 24.11 | 23.55 |
| AT1G08760.1 | Thale cress | cytosol, plastid, vacuole | 34.59 | 23.4 |
| AT4G13370.1 | Thale cress | endoplasmic reticulum, mitochondrion | 30.04 | 22.59 |
| AT1G70340.1 | Thale cress | mitochondrion | 21.74 | 21.57 |
| AT3G19610.1 | Thale cress | vacuole | 24.9 | 19.69 |
| AT2G31920.1 | Thale cress | plastid | 22.53 | 19.49 |
Protein Annotations
| ArrayExpress:AT3G14170 | EnsemblPlants:AT3G14170.2 | EnsemblPlantsGene:AT3G14170 | EntrezGene:820634 | InterPro:DUF936_pln | PANTHER:PTHR31928 |
| PANTHER:PTHR31928:SF2 | PFAM:PF06075 | ProteinID:ANM65398.1 | RefSeq:AT3G14170 | RefSeq:AT3G14170-TAIR-G | RefSeq:NP_001327370.1 |
| SEG:seg | TAIR:AT3G14170 | Unigene:At.23920 | UniParc:UPI0008484EA8 | UniProt:A0A1I9LS40 | MapMan:20.1.5.4.2 |
Description
Plant protein of unknown function (DUF936) [Source:TAIR;Acc:AT3G14170]
Coordinates
chr3:-:4695886..4698141
Molecular Weight (calculated)
55730.9 Da
IEP (calculated)
10.186
GRAVY (calculated)
-0.451
Length
506 amino acids
Sequence
(BLAST)
(BLAST)
001: MASLTPRVLI KLLETMNTNI KVRGEYRSVL LQVISIVPAL AGSELWPNQG FFIKVSDSSH STYVSLSNED NELILNNKLG IGQFFYVDKL DAGTPVPVLV
101: GVRPISGRHP FVGNPKDLMQ MLVPSETTPR EEEYHNQKKQ KDGARSNIVE NIRKHQPFVI KEEKTGVASR YMKGISNSKA SGSDSSSGGS NNEGETGSIM
201: VAKKVGVLAK GKQREHKDQA RQAGPLQCRP ATAPTKAEPK KLSLSSTVNY INRKSNSAED ASWSSLPVSL SKLGKGMLRR RNLAALIAAE VQREALAASH
301: LIKCISMFAE LSSNASPKNP HTSLRNFFTL QSILDQVQVT VVASKDKSFQ PVNIHSLWME PEKLSKKASL SSSRATMKPS KALTEAEKLE WVKGNGTEEI
401: KELTNTLKRE TRSWFLKFLE DALDTGLHAT VPEKKGKTKG ARLAEPDNHI AETLSQLKQA NEWLEKVKND NLSSDNSLLE NIERLKKKIY SCLLLYVDSA
501: ASAIGV
101: GVRPISGRHP FVGNPKDLMQ MLVPSETTPR EEEYHNQKKQ KDGARSNIVE NIRKHQPFVI KEEKTGVASR YMKGISNSKA SGSDSSSGGS NNEGETGSIM
201: VAKKVGVLAK GKQREHKDQA RQAGPLQCRP ATAPTKAEPK KLSLSSTVNY INRKSNSAED ASWSSLPVSL SKLGKGMLRR RNLAALIAAE VQREALAASH
301: LIKCISMFAE LSSNASPKNP HTSLRNFFTL QSILDQVQVT VVASKDKSFQ PVNIHSLWME PEKLSKKASL SSSRATMKPS KALTEAEKLE WVKGNGTEEI
401: KELTNTLKRE TRSWFLKFLE DALDTGLHAT VPEKKGKTKG ARLAEPDNHI AETLSQLKQA NEWLEKVKND NLSSDNSLLE NIERLKKKIY SCLLLYVDSA
501: ASAIGV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.