Factsheet for Zm00001d027907_P002

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, nucleus, cytosol

Predictor Summary:

mitochondrion 3
cytosol 1
nucleus 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d012110_P001	Maize	nucleus	60.55	89.47
Zm00001d038770_P001	Maize	cytosol	60.55	88.4
Zm00001d017634_P001	Maize	cytosol	60.0	87.95
Zm00001d032126_P001	Maize	cytosol	55.07	85.9
KRG89920	Soybean	extracellular, mitochondrion	31.23	61.62
EER95393	Sorghum	cytosol	93.7	60.42
Os03t0181800-01	Rice	cytosol	80.55	51.31
HORVU4Hr1G077070.1	Barley	cytosol	80.82	50.0
TraesCS4A01G006800.1	Wheat	cytosol	80.82	50.0
TraesCS4B01G298200.1	Wheat	cytosol	80.82	50.0
TraesCS4D01G297000.1	Wheat	cytosol	80.82	50.0
GSMUA_Achr1P21840_001	Banana	extracellular	48.77	33.27
VIT_09s0002g00760.t01	Wine grape	mitochondrion	44.38	30.62
CDY52268	Canola	mitochondrion	41.1	29.59
PGSC0003DMT400058976	Potato	mitochondrion	41.92	29.54
KRH47653	Soybean	endoplasmic reticulum, nucleus, peroxisome	43.29	29.53
AT3G14170.2	Thale cress	cytosol, golgi, mitochondrion, nucleus	40.82	29.45
Solyc03g122080.2.1	Tomato	mitochondrion	41.64	29.34
CDX97548	Canola	mitochondrion	40.55	29.19
PGSC0003DMT400074262	Potato	cytosol	41.37	29.04
KRH06232	Soybean	nucleus	42.19	28.84
Bra027368.1-P	Field mustard	mitochondrion	40.0	28.8
Solyc12g049500.1.1	Tomato	cytosol	38.9	27.95
KRH69022	Soybean	golgi, mitochondrion	40.55	27.31
Zm00001d031700_P003	Maize	cytosol, mitochondrion, plastid	32.6	15.95
Zm00001d021181_P005	Maize	cytosol, mitochondrion, nucleus	32.33	15.86
Zm00001d006130_P001	Maize	mitochondrion, plastid	30.96	14.85
Zm00001d040147_P001	Maize	nucleus	23.29	14.12
Zm00001d006732_P001	Maize	plastid	23.29	13.1
Zm00001d052368_P001	Maize	cytosol, mitochondrion, plastid	21.37	10.67

Protein Annotations

EnsemblPlants:Zm00001d027907_P002	EnsemblPlants:Zm00001d027907_T002	EnsemblPlantsGene:Zm00001d027907	InterPro:DUF936_pln	ncoils:Coil	PANTHER:PTHR31928
PANTHER:PTHR31928:SF2	PFAM:PF06075	ProteinID:ONL94256.1	ProteinID:ONL94257.1	ProteinID:ONL94258.1	SEG:seg
UniParc:UPI0008442448	UniProt:A0A1D6JQJ7	MapMan:20.1.5.4.2	:	:	:

Description

DUF936 family protein

Coordinates

chr1:+:17314705..17317861

Molecular Weight (calculated)

39300.1 Da

IEP (calculated)

10.648

GRAVY (calculated)

-0.450

Length

365 amino acids

Sequence
(BLAST)

001: MASLTPGILL KVLKHINSDV KVCGEYRSIL LQVISIVPAI TGSELWPDHG FFIKVSDSSH STYVSLSKED NELILSNKLQ LGQFIYVEKV QSSIPVPVLV
101: GVRPVPGRNP CIGNPKDLMQ MSTPSGVMEA LDHQRTTSKS ADLSESEKEN LQRKVVIKEQ KTVVASRYML GVSSNNGKIT NLNSSIDSEK SNGGSTISES
201: NKKSVALKVR QEAKPQERSN NTSPSNAKLV STKQEISKDT RKNIGTSPSP NGSAVVKKQM PKESKKEVAT ERRSPPKLHR SSPTPARTSP TKLSPAAKQN
301: GNSGPVSSVS TVKKRVSETI SWDSLPTSLI NSGKAVVRRK NIALIVAAEA QREAAAAAYL VKGLG

Best Arabidopsis Sequence Match ( AT3G14170.2 )
(BLAST)

001: MASLTPRVLI KLLETMNTNI KVRGEYRSVL LQVISIVPAL AGSELWPNQG FFIKVSDSSH STYVSLSNED NELILNNKLG IGQFFYVDKL DAGTPVPVLV
101: GVRPISGRHP FVGNPKDLMQ MLVPSETTPR EEEYHNQKKQ KDGARSNIVE NIRKHQPFVI KEEKTGVASR YMKGISNSKA SGSDSSSGGS NNEGETGSIM
201: VAKKVGVLAK GKQREHKDQA RQAGPLQCRP ATAPTKAEPK KLSLSSTVNY INRKSNSAED ASWSSLPVSL SKLGKGMLRR RNLAALIAAE VQREALAASH
301: LIKCISMFAE LSSNASPKNP HTSLRNFFTL QSILDQVQVT VVASKDKSFQ PVNIHSLWME PEKLSKKASL SSSRATMKPS KALTEAEKLE WVKGNGTEEI
401: KELTNTLKRE TRSWFLKFLE DALDTGLHAT VPEKKGKTKG ARLAEPDNHI AETLSQLKQA NEWLEKVKND NLSSDNSLLE NIERLKKKIY SCLLLYVDSA
501: ASAIGV

Arabidopsis Description

Plant protein of unknown function (DUF936) [Source:TAIR;Acc:AT3G14170]
SUBAcon: [mitochondrion,golgi,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.