Factsheet for Solyc12g049500.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
mitochondrion 2
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400074262	Potato	cytosol	93.31	91.15
Solyc03g122080.2.1	Tomato	mitochondrion	64.96	63.71
VIT_09s0002g00760.t01	Wine grape	mitochondrion	53.94	51.8
KRH69022	Soybean	golgi, mitochondrion	51.18	47.97
AT3G14170.2	Thale cress	cytosol, golgi, mitochondrion, nucleus	45.67	45.85
CDY52268	Canola	mitochondrion	45.28	45.36
Zm00001d032126_P001	Maize	cytosol	20.67	44.87
Bra027368.1-P	Field mustard	mitochondrion	44.49	44.58
CDX97548	Canola	mitochondrion	44.49	44.58
Zm00001d038770_P001	Maize	cytosol	21.46	43.6
KRH47653	Soybean	endoplasmic reticulum, nucleus, peroxisome	45.87	43.55
KRH06232	Soybean	nucleus	45.47	43.26
GSMUA_Achr1P21840_001	Banana	extracellular	42.32	40.19
Zm00001d027907_P002	Maize	cytosol, mitochondrion, nucleus, peroxisome	27.95	38.9
EER95393	Sorghum	cytosol	40.94	36.75
Zm00001d017634_P001	Maize	cytosol	17.91	36.55
Os03t0181800-01	Rice	cytosol	41.14	36.47
TraesCS4A01G006800.1	Wheat	cytosol	41.14	35.42
TraesCS4D01G297000.1	Wheat	cytosol	40.94	35.25
HORVU4Hr1G077070.1	Barley	cytosol	40.75	35.08
TraesCS4B01G298200.1	Wheat	cytosol	40.35	34.75
Zm00001d012110_P001	Maize	nucleus	12.01	24.7
Solyc01g081640.2.1	Tomato	cytosol	27.36	22.17
Solyc06g073110.2.1	Tomato	endoplasmic reticulum, extracellular, nucleus	32.48	22.09
Solyc10g049800.1.1	Tomato	cytosol	17.13	21.27
Solyc12g007020.1.1	Tomato	mitochondrion	27.95	20.73
Solyc05g005580.2.1	Tomato	mitochondrion	22.83	19.46
Solyc01g107120.2.1	Tomato	cytosol	24.21	18.95

Protein Annotations

EnsemblPlants:Solyc12g049500.1.1	EnsemblPlantsGene:Solyc12g049500.1	InterPro:DUF936_pln	PANTHER:PTHR31928	PANTHER:PTHR31928:SF2	PFAM:PF06075
SEG:seg	UniParc:UPI00027699FC	UniProt:K4DFN0	MapMan:20.1.5.4.2	:	:

Description

No Description!

Coordinates

chr12:+:36730576..36732805

Molecular Weight (calculated)

56499.4 Da

IEP (calculated)

9.509

GRAVY (calculated)

-0.542

Length

508 amino acids

Sequence
(BLAST)

001: MNSNVKVRGE YRSVLLQVIS IVPALSGSEL WPNHGFFIKV SDSSHSTYVT LSKEDNEFIL NNKLQLGQFF YVDKMEAGTP VPVLVGVRPI PGRHPFVGNP
101: KDLMQMLEQS EVPDQENSST TDPKLNELVE MKKEIDKTKK FVIKEEKAVV ASRYMQGVSN QNVKIGGNDH GTGAKGVEND SNGADHKVVP LKGKQPEVKS
201: TQTQPTTPSR SRSDAFSPNT DVNVLNSREL STTPKFSTLK RTSTKQENIR ENCPFSETLI PWSSLPANLA KPGKGILRRK KLASLIAAEA QDEALTATNL
301: LHCISMFAEL CSSVSPESPH LNLSKFFTLN QLMDQTNTKS NEQILDNFAS KLSLQDKELI KSSKKTRSLN DTKNTPKSLI EVSVSERVEW AKGDGSKGVK
401: ELRDVLFNEM QSWFLKFMDE ALDVGFQLSE QEHKKKKRIV QQTDTNNQIA LALSQLKHAN DWLDKLQSKS ALNKDVAAKV DRLKQKLYAC LLLHIDSAAS
501: ALGKSCSQ

Best Arabidopsis Sequence Match ( AT3G14170.1 )
(BLAST)

001: MASLTPRVLI KLLETMNTNI KVRGEYRSVL LQVISIVPAL AGSELWPNQG FFIKVSDSSH STYVSLSNED NELILNNKLG IGQFFYVDKL DAGTPVPVLV
101: GVRPISGRHP FVGNPKDLMQ MLVPSETTPR EEEYHNQKKK DGARSNIVEN IRKHQPFVIK EEKTGVASRY MKGISNSKAS GSDSSSGGSN NEGETGSIMV
201: AKKVGVLAKG KQREHKDQAR QAGPLQCRPA TAPTKAEPKK LSLSSTVNYI NRKSNSAEDA SWSSLPVSLS KLGKGMLRRR NLAALIAAEV QREALAASHL
301: IKCISMFAEL SSNASPKNPH TSLRNFFTLQ SILDQVQVTV VASKDKSFQP VNIHSLWMEP EKLSKKASLS SSRATMKPSK ALTEAEKLEW VKGNGTEEIK
401: ELTNTLKRET RSWFLKFLED ALDTGLHATV PEKKGKTKGA RLAEPDNHIA ETLSQLKQAN EWLEKVKNDN LSSDNSLLEN IERLKKKIYS CLLLYVDSAA
501: SAIGV

Arabidopsis Description

Plant protein of unknown function (DUF936) [Source:TAIR;Acc:AT3G14170]
SUBAcon: [mitochondrion,golgi,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.