Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400066158 | Potato | nucleus | 92.3 | 91.73 |
| Solyc10g049800.1.1 | Tomato | cytosol | 37.44 | 59.41 |
| Bra001755.1-P | Field mustard | nucleus | 30.51 | 33.11 |
| CDY22966 | Canola | endoplasmic reticulum | 30.97 | 31.9 |
| CDX82287 | Canola | endoplasmic reticulum | 30.82 | 31.8 |
| AT3G19610.1 | Thale cress | vacuole | 31.28 | 31.72 |
| GSMUA_Achr4P03420_001 | Banana | cytosol | 24.96 | 27.36 |
| GSMUA_Achr4P10950_001 | Banana | cytosol, mitochondrion, nucleus | 24.5 | 27.18 |
| Solyc06g073110.2.1 | Tomato | endoplasmic reticulum, extracellular, nucleus | 30.05 | 26.1 |
| HORVU2Hr1G035200.1 | Barley | plastid | 15.25 | 25.52 |
| Os07t0588300-00 | Rice | plastid | 24.96 | 25.0 |
| KXG36592 | Sorghum | plastid | 24.81 | 24.39 |
| Solyc12g049500.1.1 | Tomato | cytosol | 18.95 | 24.21 |
| Zm00001d006732_P001 | Maize | plastid | 24.04 | 24.04 |
| TraesCS2D01G193600.1 | Wheat | plastid | 23.57 | 23.47 |
| TraesCS2B01G212600.1 | Wheat | plastid | 23.73 | 23.4 |
| Solyc03g122080.2.1 | Tomato | mitochondrion | 18.49 | 23.17 |
| TraesCS2A01G194300.1 | Wheat | plastid | 23.27 | 23.09 |
| Solyc01g081640.2.1 | Tomato | cytosol | 20.8 | 21.53 |
| Solyc05g005580.2.1 | Tomato | mitochondrion | 18.95 | 20.64 |
| Solyc12g007020.1.1 | Tomato | mitochondrion | 20.49 | 19.42 |
Protein Annotations
| EnsemblPlants:Solyc01g107120.2.1 | EnsemblPlantsGene:Solyc01g107120.2 | InterPro:DUF936_pln | PANTHER:PTHR31928 | PANTHER:PTHR31928:SF12 | PFAM:PF06075 |
| SEG:seg | UniParc:UPI0002767AAE | UniProt:K4B2S9 | MapMan:20.1.5.4.2 | : | : |
Description
No Description!
Coordinates
chr1:+:94742384..94745238
Molecular Weight (calculated)
72354.2 Da
IEP (calculated)
8.297
GRAVY (calculated)
-0.449
Length
649 amino acids
Sequence
(BLAST)
(BLAST)
001: MASLKSGVLV KLLEEMKMVE NMIVEDRKPI LLQIRSIIPV LEEGNLLLPN RGFYLKISDV SHAIYVTLPQ NQNELILGNK LKLGQFIYVQ KLEDAEPFPL
101: LKDFTPLPGR RLCDGTPEEI GKVPKLEKNI LDGSNSDFIV EKGVISEENI MDISSCLRRL SLESSDVDEV RKKSSNTNVI DGSSNTKRKF RSLSASKTRP
201: GVKRSGDIDS MRLDGRCRRM SIDNDSDTDS TISSVSSSTW TSKRKSWNEL KSLGAEEIFD SSVVKHNIRP PRCRSATVSP VRSTKYDSSD DNSSSLSRRK
301: VVNVEKKTVK ASAKSKNSVS KINSEQINRP IKGLVFDRQG AESGISWDSL SSSLVELGKE VVKKRDIALF AAAEALQEAC VAERLLNSLS KFSEFHLPED
401: DLQPCIDTFL DLQDDMAQTR LIIKCLTNIS PSITEETDSS STSADTEASS ITVQRKKNAT TWIKSAVALD LSLSSAALNP IPNSRNITNT LKKSITSSDS
501: TKQKGAIIVK TDHNKNTDDI SPVLTSNNDT QPEWTRGSTI DAATHLGSSL LDDCRKRFLG YIEKYINELE RKMSLMVSDN QVAAMMYKIK RVNDWLDLII
601: NKEGSNLDDS EIETCHRVRN KIYGILLKHV ERTAMAFESS KVLRYIVDN
101: LKDFTPLPGR RLCDGTPEEI GKVPKLEKNI LDGSNSDFIV EKGVISEENI MDISSCLRRL SLESSDVDEV RKKSSNTNVI DGSSNTKRKF RSLSASKTRP
201: GVKRSGDIDS MRLDGRCRRM SIDNDSDTDS TISSVSSSTW TSKRKSWNEL KSLGAEEIFD SSVVKHNIRP PRCRSATVSP VRSTKYDSSD DNSSSLSRRK
301: VVNVEKKTVK ASAKSKNSVS KINSEQINRP IKGLVFDRQG AESGISWDSL SSSLVELGKE VVKKRDIALF AAAEALQEAC VAERLLNSLS KFSEFHLPED
401: DLQPCIDTFL DLQDDMAQTR LIIKCLTNIS PSITEETDSS STSADTEASS ITVQRKKNAT TWIKSAVALD LSLSSAALNP IPNSRNITNT LKKSITSSDS
501: TKQKGAIIVK TDHNKNTDDI SPVLTSNNDT QPEWTRGSTI DAATHLGSSL LDDCRKRFLG YIEKYINELE RKMSLMVSDN QVAAMMYKIK RVNDWLDLII
601: NKEGSNLDDS EIETCHRVRN KIYGILLKHV ERTAMAFESS KVLRYIVDN
001: MQQIEKRSLL CSFLSVFHLI HLQALLLEMA ELRSGVLFKL LEEMGVGKVR RDVDHRPVLL QIRCIIPVLA AGGLWPNKGF FLRITDSTHS IYVSLPREEN
101: DLVLYDKLQI GQLIFVEKLE FAYPVPMIKG IRPTPGRRAC TGDPIDLIPK ERIEKFCVGL SDIEENYDHQ VKKPRRTRWN NSSVSELNFT DLGLSKNLSS
201: VMEEKDDTES MISSCSSSFS SAARRRSWIG SADNRKRRDS LDPSMIKNHD HDTKHVSRAR SSSATSPSLS IRSYGGIEEK SSSRTRRRDV VVSPSPRWSK
301: SLSYGSRSNK SKNLLPPKSN TFESSDPISR KRSWTETEIL WDSLPPKVVN LGKEILRQRD TAIRAASQAL LEASAAERLL KCLRSYSELS DRRNQHQENQ
401: QPPIQDFLSF QDELSKSRLI IQSLSTEKTE HCNANIVKTG DERREKATQW IKSALATDLK LVSLSASKPT QSPGRKGLTL IAQESDNREG NASESNSRLG
501: EIKERLSRAS SELRNWLKEE GRSWYLNRVE KYLDEISNGT KWREMRSEEV GETMYQIKRV SDWLDTIVKG EEDEEEKMVM MMMSESETEA CGRVRNKIYR
601: ILLKHVETTS LLSHQRSTSL MSHHQQQQHE QHLFQKTMSL
101: DLVLYDKLQI GQLIFVEKLE FAYPVPMIKG IRPTPGRRAC TGDPIDLIPK ERIEKFCVGL SDIEENYDHQ VKKPRRTRWN NSSVSELNFT DLGLSKNLSS
201: VMEEKDDTES MISSCSSSFS SAARRRSWIG SADNRKRRDS LDPSMIKNHD HDTKHVSRAR SSSATSPSLS IRSYGGIEEK SSSRTRRRDV VVSPSPRWSK
301: SLSYGSRSNK SKNLLPPKSN TFESSDPISR KRSWTETEIL WDSLPPKVVN LGKEILRQRD TAIRAASQAL LEASAAERLL KCLRSYSELS DRRNQHQENQ
401: QPPIQDFLSF QDELSKSRLI IQSLSTEKTE HCNANIVKTG DERREKATQW IKSALATDLK LVSLSASKPT QSPGRKGLTL IAQESDNREG NASESNSRLG
501: EIKERLSRAS SELRNWLKEE GRSWYLNRVE KYLDEISNGT KWREMRSEEV GETMYQIKRV SDWLDTIVKG EEDEEEKMVM MMMSESETEA CGRVRNKIYR
601: ILLKHVETTS LLSHQRSTSL MSHHQQQQHE QHLFQKTMSL
Arabidopsis Description
Plant protein of unknown function (DUF936) [Source:TAIR;Acc:AT3G19610]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.