Factsheet for Solyc06g073110.2.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, nucleus

Predictor Summary:

nucleus 3
mitochondrion 2
extracellular 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY05811	Canola	cytosol	12.32	71.32
CDX91320	Canola	extracellular	9.24	69.0
VIT_05s0102g01200.t01	Wine grape	endoplasmic reticulum, extracellular, nucleus	67.34	68.06
CDY22665	Canola	extracellular, nucleus, peroxisome	50.87	60.51
KRH29601	Soybean	nucleus	59.57	59.97
KRH24591	Soybean	nucleus	59.04	59.43
CDY08643	Canola	mitochondrion, nucleus	9.77	59.35
KRH23226	Soybean	nucleus	59.44	58.89
CDY06329	Canola	extracellular, nucleus, peroxisome	49.26	58.88
KRH10106	Soybean	nucleus	60.51	58.7
Bra031640.1-P	Field mustard	cytosol, nucleus, peroxisome	53.68	57.95
CDX95036	Canola	extracellular, nucleus, vacuole	56.89	57.82
Bra018603.1-P	Field mustard	cytosol, nucleus, vacuole	56.63	57.47
CDX93540	Canola	extracellular, nucleus, vacuole	56.49	57.34
AT1G08760.1	Thale cress	cytosol, plastid, vacuole	56.63	56.55
GSMUA_Achr11P...	Banana	cytosol, extracellular, nucleus	30.92	55.13
CDY69908	Canola	plastid	8.03	50.85
GSMUA_Achr5P25710_001	Banana	cytosol, plasma membrane, plastid	49.93	50.61
Os09t0516700-01	Rice	cytosol, extracellular, nucleus	30.66	49.46
GSMUA_Achr3P21570_001	Banana	extracellular, peroxisome, plastid	48.59	48.92
EES14150	Sorghum	cytosol, plasma membrane, plastid	47.66	47.91
TraesCS7A01G266300.1	Wheat	cytosol, mitochondrion, plastid	46.85	47.62
TraesCS7D01G268500.2	Wheat	cytosol, mitochondrion, nucleus	46.72	47.61
Os08t0541500-01	Rice	mitochondrion, peroxisome, plastid	46.72	47.61
TraesCS7B01G166200.1	Wheat	cytosol, mitochondrion, plastid	46.32	47.2
Zm00001d031700_P003	Maize	cytosol, mitochondrion, plastid	47.12	47.19
EER99187	Sorghum	cytosol, mitochondrion, nucleus	46.85	47.11
GSMUA_Achr11P...	Banana	plastid	43.64	46.18
Zm00001d021181_P005	Maize	cytosol, mitochondrion, nucleus	45.65	45.83
Zm00001d006130_P001	Maize	mitochondrion, plastid	46.32	45.47
HORVU5Hr1G079460.1	Barley	cytosol, mitochondrion, plastid	45.52	45.21
GSMUA_Achr11P...	Banana	cytosol, nucleus, plastid	18.47	45.1
TraesCS5D01G309900.1	Wheat	cytosol, mitochondrion, plastid	44.98	44.92
TraesCS5B01G303400.1	Wheat	cytosol, mitochondrion, plastid	45.11	44.87
TraesCS5A01G303100.1	Wheat	cytosol, mitochondrion, plastid	44.71	44.47
Solyc10g049800.1.1	Tomato	cytosol	17.94	32.76
Solyc12g049500.1.1	Tomato	cytosol	22.09	32.48
Solyc03g122080.2.1	Tomato	mitochondrion	22.49	32.43
GSMUA_Achr9P08220_001	Banana	mitochondrion	43.78	30.45
Solyc01g107120.2.1	Tomato	cytosol	26.1	30.05
TraesCS4A01G231900.1	Wheat	nucleus, plastid	17.94	29.98
TraesCS4D01G082000.1	Wheat	nucleus, plastid	18.47	29.49
TraesCS4B01G084100.1	Wheat	nucleus, plastid	18.34	29.46
Solyc01g081640.2.1	Tomato	cytosol	24.63	29.35
HORVU4Hr1G014370.1	Barley	nucleus, plastid	17.94	28.76
KXG28276	Sorghum	plastid	18.74	28.4
Solyc12g007020.1.1	Tomato	mitochondrion	25.7	28.03
Solyc05g005580.2.1	Tomato	mitochondrion	22.09	27.68

Protein Annotations

EnsemblPlants:Solyc06g073110.2.1	EnsemblPlantsGene:Solyc06g073110.2	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0008017
GO:GO:0008150	GO:GO:0009987	GO:GO:0030154	GO:GO:0048759	InterPro:DUF936_pln	PANTHER:PTHR31928
PANTHER:PTHR31928:SF4	PFAM:PF06075	SEG:seg	UniParc:UPI0002765BC8	UniProt:K4C931	MapMan:20.1.5.4.2

Description

No Description!

Coordinates

chr6:-:45034360..45041719

Molecular Weight (calculated)

80264.2 Da

IEP (calculated)

10.174

GRAVY (calculated)

-0.532

Length

747 amino acids

Sequence
(BLAST)

001: MATLVPGVLL KLLQHMNTDV KVAGEHRSSL LQVVSIVPAL AGGELFPNQG FYLKVSDSSH ATYVSLPDEH DDLILSDKIQ LGQFIHVERL EAASPVPILR
101: GVRPVPGRHP CVGTPEDIVA THSLGFLNNN GNLSPGSKSR DKTKSPSKAL GNSHVAAKDN KSAVSRSNGG TKQEKVEKKK PTLTWSKSHL SKLALNVVEK
201: KDSLMRVKSS SSSRSIPTSP TSCYSLPTSF EKFSNGVKLQ AKVKGLERLE KATTKPGVEK SSSVRGASPT PKRLLGGNPL KNYLQGLELE PKALRKSWEG
301: NMDLKSRESP RLRVNKHDLK PEPRSTSVPR KSTSEKLTSK EDNRGILAKS SKEENKAHTS LKKSTNGEPV DADKSSNQKI SKGRKQPGEV NNGLQDLVKV
401: AVSNRILADG NVAWSSLPSS LTKIGKEVMK HRDAAQVAAI EAMQVASASE SLLRCLSTYS ELSSSAKEDN AQPAVEQFLA LHASLKNVHL VGDALSKTIS
501: AAGSESDHEE NPSEEALKAV SEKRKQATLW VNAALATNLS SFSVYSKKAT SSPIAPSAPS PSPKTIALNQ PMLVLDNSTK STLAKPQAKP RPTMSSKIQS
601: SGSQRRLADG IASNQKPKSP PPADWVRGDG LEEAVDLAEM LRVASQDWFL GFVERFLDAD VDASALSDNG QIAGMLSQLK SVNDWLDEIS SSKDDESPQI
701: ASETIDRIRK KIYEYLLTHV ESAAAALGGG SGGSSQVPPT IETKTRK

Best Arabidopsis Sequence Match ( AT1G08760.1 )
(BLAST)

001: MANLVPGVLL KLLQHMNTDV KIAGEHRSSL LQVISIVPAL AGGELFPNQG FYLKVSDSSH ATYVSLPDEH DDLILSDKIQ LGQYIHVDRV ESSSPVPILR
101: GVRPVPGRHP CVGDPEDIVA THSLGFLSDD KVKNDNNGGV SSKPKERVKA SVKANGSGSD GERIIGNRLS VSISRDDSSD GKKPVSALFR AKSAKSSLSL
201: DVKKESLGKL KTSSGSKSIP SSPTSCYSLP NSFAKFANGI KQQQTVKPKL LEKGSPRMGL SEKGRSLLKA ESPKVGKKLP MIKNFVQGIE FGAKALRKSW
301: EGNLDIRGSD RTKSSLPRRD LTPDSRSLAA PRRSTSSEKL PSKQERANVF ARSSKEHNKI QSTKKVEPTA VLDTKDKTSR PKSTSVEKKS VAENGLPGNL
401: VKVSVNGKRL AAANIQWSSL PPSLSRMGQE VLRHREAAQV VAIEALQEAS ASESLLQCLI MYSDLLSTAK EDDPLPVVEQ FLKLHSGLKN VQVITESLSK
501: LLSLMSSPDN EENRSEEAIK AASEKQKLAA SWVQAALVTN LSPFSVYSSK QAKLAASRSK PVIILESPGN NSSSKTRGNI QNKPTIGSKL VAQGMIRKHR
601: ENSSSQKATS VAGSESPPLN WVKGNGLNEA TDLAEKLQMV SQDWFLGFVE RFLDADVITS SSLSLSDNGQ IAGMLSQLKS VNDWLDEIGS KEDEEGLQEV
701: SKETIDRLRK KIYEYLLTHV ESAAAALGGG GGSVSSPRPK PIETKAKR

Arabidopsis Description

At1g08760 [Source:UniProtKB/TrEMBL;Acc:Q9FRR2]
SUBAcon: [plastid,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.