Factsheet for Solyc03g122080.2.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
cytosol 1
plastid 3
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400058976	Potato	mitochondrion	96.14	96.14
Solyc12g049500.1.1	Tomato	cytosol	63.71	64.96
VIT_09s0002g00760.t01	Wine grape	mitochondrion	56.18	55.01
Zm00001d032126_P001	Maize	cytosol	22.01	48.72
KRH69022	Soybean	golgi, mitochondrion	50.97	48.71
AT3G14170.2	Thale cress	cytosol, golgi, mitochondrion, nucleus	46.33	47.43
CDY52268	Canola	mitochondrion	46.14	47.14
CDX97548	Canola	mitochondrion	45.37	46.35
Zm00001d038770_P001	Maize	cytosol	22.2	46.0
KRH47653	Soybean	endoplasmic reticulum, nucleus, peroxisome	47.49	45.98
Bra027368.1-P	Field mustard	mitochondrion	44.79	45.76
KRH06232	Soybean	nucleus	47.1	45.69
Zm00001d027907_P002	Maize	cytosol, mitochondrion, nucleus, peroxisome	29.34	41.64
GSMUA_Achr1P21840_001	Banana	extracellular	42.08	40.75
Zm00001d017634_P001	Maize	cytosol	19.5	40.56
Os03t0181800-01	Rice	cytosol	43.44	39.27
EER95393	Sorghum	cytosol	42.47	38.87
TraesCS4A01G006800.1	Wheat	cytosol	42.28	37.12
TraesCS4B01G298200.1	Wheat	cytosol	42.08	36.95
TraesCS4D01G297000.1	Wheat	cytosol	42.08	36.95
HORVU4Hr1G077070.1	Barley	cytosol	42.08	36.95
Zm00001d012110_P001	Maize	nucleus	13.9	29.15
Solyc10g049800.1.1	Tomato	cytosol	18.73	23.72
Solyc01g081640.2.1	Tomato	cytosol	28.19	23.29
Solyc05g005580.2.1	Tomato	mitochondrion	26.45	22.99
Solyc06g073110.2.1	Tomato	endoplasmic reticulum, extracellular, nucleus	32.43	22.49
Solyc12g007020.1.1	Tomato	mitochondrion	27.22	20.58
Solyc01g107120.2.1	Tomato	cytosol	23.17	18.49

Protein Annotations

EnsemblPlants:Solyc03g122080.2.1	EnsemblPlantsGene:Solyc03g122080.2	InterPro:DUF936_pln	PANTHER:PTHR31928	PANTHER:PTHR31928:SF2	PFAM:PF06075
SEG:seg	UniParc:UPI00027657CF	UniProt:K4BN06	MapMan:20.1.5.4.2	:	:

Description

No Description!

Coordinates

chr3:+:70050315..70052922

Molecular Weight (calculated)

57684.6 Da

IEP (calculated)

9.944

GRAVY (calculated)

-0.438

Length

518 amino acids

Sequence
(BLAST)

001: MAALVPGVLI KLLQNMHSNK KVRGEHRSVL LQVISIVPAL NGSELWPNHG FFIKVSDSSH STYVTLSKEE NEFILNNKLQ LGQFFYVERM EPGTPVPVLV
101: GVRRLPGRHP FVGNPKDLMQ MLEPSEVTVR NAQEDVNGSK LNESPELNKE DSKNKFVIKE QKTVVASRYM RGVLTSNTKI GGLDQGTGVK GIENENRGAA
201: KKAVPLKEKQ CELKGQTRSS TPFRSQSDAF VINSGINKHM KTPRFSTLKL TTSKQESIRE NSQSSEAYMP WSSLPTNLAK PGKGILRRGL LASLVAAEAQ
301: EEAKEAAKLL HCLRMFAELC TSASPECPHI SLSKFFALNN LIELPSTVKT KELTPDDFAT KLSVHEKVKE GKMTCFMNGK ATSKSLKPSV ELSGSEKLEW
401: AKGDGSKDIV ELRELLLNEI QYWFLKFLEG ALEVGLWQNK QEQKTKVSVP RQTESKNQIA FTLSQLKHAN EWLDKVRSTL CSDKNNVADR VDRLKQKLYT
501: CLLLYMDSAA SALGKPAS

Best Arabidopsis Sequence Match ( AT3G14170.2 )
(BLAST)

001: MASLTPRVLI KLLETMNTNI KVRGEYRSVL LQVISIVPAL AGSELWPNQG FFIKVSDSSH STYVSLSNED NELILNNKLG IGQFFYVDKL DAGTPVPVLV
101: GVRPISGRHP FVGNPKDLMQ MLVPSETTPR EEEYHNQKKQ KDGARSNIVE NIRKHQPFVI KEEKTGVASR YMKGISNSKA SGSDSSSGGS NNEGETGSIM
201: VAKKVGVLAK GKQREHKDQA RQAGPLQCRP ATAPTKAEPK KLSLSSTVNY INRKSNSAED ASWSSLPVSL SKLGKGMLRR RNLAALIAAE VQREALAASH
301: LIKCISMFAE LSSNASPKNP HTSLRNFFTL QSILDQVQVT VVASKDKSFQ PVNIHSLWME PEKLSKKASL SSSRATMKPS KALTEAEKLE WVKGNGTEEI
401: KELTNTLKRE TRSWFLKFLE DALDTGLHAT VPEKKGKTKG ARLAEPDNHI AETLSQLKQA NEWLEKVKND NLSSDNSLLE NIERLKKKIY SCLLLYVDSA
501: ASAIGV

Arabidopsis Description

Plant protein of unknown function (DUF936) [Source:TAIR;Acc:AT3G14170]
SUBAcon: [mitochondrion,golgi,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.