Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 3
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER95393 | Sorghum | cytosol | 80.63 | 81.63 |
| Zm00001d027907_P002 | Maize | cytosol, mitochondrion, nucleus, peroxisome | 51.31 | 80.55 |
| Zm00001d038770_P001 | Maize | cytosol | 34.9 | 80.0 |
| Zm00001d032126_P001 | Maize | cytosol | 32.64 | 79.91 |
| TraesCS4A01G006800.1 | Wheat | cytosol | 80.28 | 77.97 |
| Zm00001d017634_P001 | Maize | cytosol | 33.86 | 77.91 |
| TraesCS4B01G298200.1 | Wheat | cytosol | 79.76 | 77.46 |
| TraesCS4D01G297000.1 | Wheat | cytosol | 79.76 | 77.46 |
| Zm00001d012110_P001 | Maize | nucleus | 33.16 | 76.92 |
| HORVU4Hr1G077070.1 | Barley | cytosol | 78.36 | 76.1 |
| KRG89920 | Soybean | extracellular, mitochondrion | 19.72 | 61.08 |
| GSMUA_Achr1P21840_001 | Banana | extracellular | 44.85 | 48.04 |
| VIT_09s0002g00760.t01 | Wine grape | mitochondrion | 42.23 | 45.75 |
| PGSC0003DMT400058976 | Potato | mitochondrion | 39.44 | 43.63 |
| Solyc03g122080.2.1 | Tomato | mitochondrion | 39.27 | 43.44 |
| PGSC0003DMT400074262 | Potato | cytosol | 39.09 | 43.08 |
| AT3G14170.2 | Thale cress | cytosol, golgi, mitochondrion, nucleus | 37.7 | 42.69 |
| CDY52268 | Canola | mitochondrion | 37.35 | 42.21 |
| CDX97548 | Canola | mitochondrion | 37.0 | 41.81 |
| Bra027368.1-P | Field mustard | mitochondrion | 36.65 | 41.42 |
| KRH69022 | Soybean | golgi, mitochondrion | 39.09 | 41.33 |
| KRH47653 | Soybean | endoplasmic reticulum, nucleus, peroxisome | 38.57 | 41.31 |
| Solyc12g049500.1.1 | Tomato | cytosol | 36.47 | 41.14 |
| KRH06232 | Soybean | nucleus | 37.0 | 39.7 |
| Os01t0108800-01 | Rice | cytosol | 12.57 | 31.17 |
| Os09t0516700-01 | Rice | cytosol, extracellular, nucleus | 21.64 | 26.78 |
| Os08t0541500-01 | Rice | mitochondrion, peroxisome, plastid | 30.54 | 23.87 |
| Os07t0588300-00 | Rice | plastid | 21.99 | 19.44 |
| Os12t0120000-01 | Rice | cytosol, mitochondrion, nucleus | 22.34 | 18.08 |
| Os11t0120200-01 | Rice | cytosol, mitochondrion, nucleus | 22.16 | 17.94 |
Protein Annotations
| EMBL:AK070399 | EnsemblPlants:Os03t0181800-01 | EnsemblPlantsGene:Os03g0181800 | EntrezGene:4331838 | InterPro:DUF936_pln | ncoils:Coil |
| PANTHER:PTHR31928 | PANTHER:PTHR31928:SF2 | PFAM:PF06075 | ProteinID:AAN65445.1 | ProteinID:ABF94319.1 | ProteinID:BAF11086.1 |
| ProteinID:BAS82633.1 | ProteinID:EAZ25823.1 | RefSeq:XP_015633273.1 | SEG:seg | UniParc:UPI00000AD2E8 | UniProt:Q8H7K9 |
| MapMan:20.1.5.4.2 | : | : | : | : | : |
Description
Protein of unknown function DUF936, plant family protein. (Os03t0181800-01);Hypothetical conserved gene. (Os03t0181800-02)
Coordinates
chr3:+:4287354..4291792
Molecular Weight (calculated)
62548.3 Da
IEP (calculated)
10.260
GRAVY (calculated)
-0.556
Length
573 amino acids
Sequence
(BLAST)
(BLAST)
001: MASLTPGVLL KVLKNINSDV KVCGEYRSIL LQVISIVPAI TGSELWPDHG FFIKVSDSSH STYVSLSKED NELILSNKLQ LGQFIYVEKV QSSIPVPVLV
101: GVRPVPGRNP CIGNPKDLMQ MSTPTGISEA LAHQRKATKS AELSESEKEN SQRKVVIKEQ KAVVASRYML GISSNNSKIT NLNSSIDSDK SNGGSSICSA
201: NQKSAPTKFK QESKPQERPN TPSRSPAKIV SAKQEINKDT RKTSASSPSQ NGSAVVKKQM SKDSKKESAS EKNSPPKLYK TSPPTPTPTP PPPAMTSPPK
301: LNLAAKPNGT SGTVTSTPTV KRRVTETVSW DSLPTSLIKS VKVVARRKTI ALVVAAEAQR EATAAASLLK GLGIFAEIRK SAEEDPHAAI TKFFQLNRLI
401: IQQSVFWKDY SSEPVKESRP EKEKPSRKAS ASQNKAVAGS TAKNSDDAYT SEKIDWARED GFKEISRSWI ILKKESQSWF LSFLEDALEA GFKFEGQNKN
501: TRERVRGHSK GGDGQIAVRL SQLKETSNWL DQLHSEVDKS QDALVETIEQ LKQKVYTCLL GTVETAASAL EAR
101: GVRPVPGRNP CIGNPKDLMQ MSTPTGISEA LAHQRKATKS AELSESEKEN SQRKVVIKEQ KAVVASRYML GISSNNSKIT NLNSSIDSDK SNGGSSICSA
201: NQKSAPTKFK QESKPQERPN TPSRSPAKIV SAKQEINKDT RKTSASSPSQ NGSAVVKKQM SKDSKKESAS EKNSPPKLYK TSPPTPTPTP PPPAMTSPPK
301: LNLAAKPNGT SGTVTSTPTV KRRVTETVSW DSLPTSLIKS VKVVARRKTI ALVVAAEAQR EATAAASLLK GLGIFAEIRK SAEEDPHAAI TKFFQLNRLI
401: IQQSVFWKDY SSEPVKESRP EKEKPSRKAS ASQNKAVAGS TAKNSDDAYT SEKIDWARED GFKEISRSWI ILKKESQSWF LSFLEDALEA GFKFEGQNKN
501: TRERVRGHSK GGDGQIAVRL SQLKETSNWL DQLHSEVDKS QDALVETIEQ LKQKVYTCLL GTVETAASAL EAR
001: MASLTPRVLI KLLETMNTNI KVRGEYRSVL LQVISIVPAL AGSELWPNQG FFIKVSDSSH STYVSLSNED NELILNNKLG IGQFFYVDKL DAGTPVPVLV
101: GVRPISGRHP FVGNPKDLMQ MLVPSETTPR EEEYHNQKKK DGARSNIVEN IRKHQPFVIK EEKTGVASRY MKGISNSKAS GSDSSSGGSN NEGETGSIMV
201: AKKVGVLAKG KQREHKDQAR QAGPLQCRPA TAPTKAEPKK LSLSSTVNYI NRKSNSAEDA SWSSLPVSLS KLGKGMLRRR NLAALIAAEV QREALAASHL
301: IKCISMFAEL SSNASPKNPH TSLRNFFTLQ SILDQVQVTV VASKDKSFQP VNIHSLWMEP EKLSKKASLS SSRATMKPSK ALTEAEKLEW VKGNGTEEIK
401: ELTNTLKRET RSWFLKFLED ALDTGLHATV PEKKGKTKGA RLAEPDNHIA ETLSQLKQAN EWLEKVKNDN LSSDNSLLEN IERLKKKIYS CLLLYVDSAA
501: SAIGV
101: GVRPISGRHP FVGNPKDLMQ MLVPSETTPR EEEYHNQKKK DGARSNIVEN IRKHQPFVIK EEKTGVASRY MKGISNSKAS GSDSSSGGSN NEGETGSIMV
201: AKKVGVLAKG KQREHKDQAR QAGPLQCRPA TAPTKAEPKK LSLSSTVNYI NRKSNSAEDA SWSSLPVSLS KLGKGMLRRR NLAALIAAEV QREALAASHL
301: IKCISMFAEL SSNASPKNPH TSLRNFFTLQ SILDQVQVTV VASKDKSFQP VNIHSLWMEP EKLSKKASLS SSRATMKPSK ALTEAEKLEW VKGNGTEEIK
401: ELTNTLKRET RSWFLKFLED ALDTGLHATV PEKKGKTKGA RLAEPDNHIA ETLSQLKQAN EWLEKVKNDN LSSDNSLLEN IERLKKKIYS CLLLYVDSAA
501: SAIGV
Arabidopsis Description
Plant protein of unknown function (DUF936) [Source:TAIR;Acc:AT3G14170]
SUBAcon: [mitochondrion,golgi,nucleus,cytosol]
SUBAcon: [mitochondrion,golgi,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.