Factsheet for Os08t0541500-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, plastid

Predictor Summary:

nucleus 2
mitochondrion 3
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES14150	Sorghum	cytosol, plasma membrane, plastid	83.49	82.37
TraesCS7D01G268500.2	Wheat	cytosol, mitochondrion, nucleus	81.86	81.86
TraesCS7B01G166200.1	Wheat	cytosol, mitochondrion, plastid	81.58	81.58
TraesCS7A01G266300.1	Wheat	cytosol, mitochondrion, plastid	81.58	81.36
Zm00001d031700_P003	Maize	cytosol, mitochondrion, plastid	80.49	79.09
Os09t0516700-01	Rice	cytosol, extracellular, nucleus	46.52	73.65
CDY05811	Canola	cytosol	11.6	65.89
CDX91320	Canola	extracellular	8.05	59.0
GSMUA_Achr11P...	Banana	cytosol, extracellular, nucleus	33.7	58.95
GSMUA_Achr5P25710_001	Banana	cytosol, plasma membrane, plastid	57.57	57.26
GSMUA_Achr3P21570_001	Banana	extracellular, peroxisome, plastid	55.39	54.72
GSMUA_Achr11P...	Banana	plastid	50.34	52.27
GSMUA_Achr11P...	Banana	cytosol, nucleus, plastid	21.42	51.31
CDY08643	Canola	mitochondrion, nucleus	8.59	51.22
VIT_05s0102g01200.t01	Wine grape	endoplasmic reticulum, extracellular, nucleus	49.39	48.99
CDY22665	Canola	extracellular, nucleus, peroxisome	40.52	47.29
Solyc06g073110.2.1	Tomato	endoplasmic reticulum, extracellular, nucleus	47.61	46.72
KRH29601	Soybean	nucleus	46.25	45.69
CDY06329	Canola	extracellular, nucleus, peroxisome	38.74	45.44
KRH24591	Soybean	nucleus	45.7	45.15
Bra031640.1-P	Field mustard	cytosol, nucleus, peroxisome	41.2	43.64
CDX95036	Canola	extracellular, nucleus, vacuole	43.52	43.4
KRH23226	Soybean	nucleus	44.2	42.97
AT1G08760.1	Thale cress	cytosol, plastid, vacuole	43.79	42.91
Bra018603.1-P	Field mustard	cytosol, nucleus, vacuole	42.97	42.8
CDX93540	Canola	extracellular, nucleus, vacuole	42.84	42.66
KRH10106	Soybean	nucleus	44.2	42.08
CDY69908	Canola	plastid	6.68	41.53
Os01t0108800-01	Rice	cytosol	11.32	35.93
Os03t0181800-01	Rice	cytosol	23.87	30.54
Os11t0120200-01	Rice	cytosol, mitochondrion, nucleus	24.15	25.0
Os12t0120000-01	Rice	cytosol, mitochondrion, nucleus	24.01	24.86
Os07t0588300-00	Rice	plastid	21.69	24.54

Protein Annotations

EnsemblPlants:Os08t0541500-01	EnsemblPlantsGene:Os08g0541500	EntrezGene:4346193	InterPro:DUF936_pln	PANTHER:PTHR31928	PANTHER:PTHR31928:SF11
PFAM:PF06075	ProteinID:BAD03103.1	ProteinID:BAF24302.1	ProteinID:BAT06495.1	RefSeq:XP_015651061.1	SEG:seg
UniParc:UPI0000225FF8	UniProt:Q6ZIT8	MapMan:20.1.5.4.2	:	:	:

Description

Protein of unknown function DUF936, plant family protein. (Os08t0541500-01)

Coordinates

chr8:-:27103316..27109475

Molecular Weight (calculated)

77519.5 Da

IEP (calculated)

10.198

GRAVY (calculated)

-0.434

Length

733 amino acids

Sequence
(BLAST)

001: MASLVPGVLL KLLQHMNSDV KVAGEHRSSL LQVVSIVPAL AGSDLFTNQG FYLKVSDSSH ATYVSLPEEQ HDLILSDTIQ LGQFIHVDRL EAATPVPILR
101: GVRPVPGRHA CVGSPEDLVV TNSTFLGSKK AQQSINGSKD ASTLSLEKEQ SKLEKLKPSV KNNGAEIKKP QLTKSNSSLS KQALNSIIDK KEVVSSKTKP
201: TSARSTPSSP TSVYSLPASF ERFSNDIKQR TKSKGADKSS PSRLSLLEKA ASVLKATTAG RKSSAGNLLS NTMSSIESGP KALRRSWEGN AEAKSKGNSD
301: SKAAKTEKKS ENRSTSTPRR KPLVEEKPLH KDDSKIQTPP RKSSASAPSD DSEKIVNKPS SPLRRTSGVS SNTNITNLVK IASNSKKLTD ASASWTSLPP
401: SLAKLGKELL KYRDAAQMAA VEAMQEASAA ENLLRCLSSY AEVSSTAEEQ NPQPAVEQFL ALHAAMSRAT VVTDSLTKAT ATSTATSPDR STPSEAAAVD
501: EESLAVAVER RRRAASWVGA GLATDLSAFS LYNLKPPPAI AASPLAVVLV DESARPAAAT KASPPAKSRL FPPKVKGRVG PVAAAVAAAP VPPPEWERGG
601: GAEERGELAR RLGEEARGWF LAFVERFLDA DVAAAAAPWD RDRAARMLPQ LKRVNDWLSE IAKPTEPPPP QSDADGEEAG GGAPAVANGG GNTVPEETIE
701: RLRKKIYEYL LTNVDSAASV LGGAGAAANG KRV

Best Arabidopsis Sequence Match ( AT1G08760.1 )
(BLAST)

001: MANLVPGVLL KLLQHMNTDV KIAGEHRSSL LQVISIVPAL AGGELFPNQG FYLKVSDSSH ATYVSLPDEH DDLILSDKIQ LGQYIHVDRV ESSSPVPILR
101: GVRPVPGRHP CVGDPEDIVA THSLGFLSDD KVKNDNNGGV SSKPKERVKA SVKANGSGSD GERIIGNRLS VSISRDDSSD GKKPVSALFR AKSAKSSLSL
201: DVKKESLGKL KTSSGSKSIP SSPTSCYSLP NSFAKFANGI KQQQTVKPKL LEKGSPRMGL SEKGRSLLKA ESPKVGKKLP MIKNFVQGIE FGAKALRKSW
301: EGNLDIRGSD RTKSSLPRRD LTPDSRSLAA PRRSTSSEKL PSKQERANVF ARSSKEHNKI QSTKKVEPTA VLDTKDKTSR PKSTSVEKKS VAENGLPGNL
401: VKVSVNGKRL AAANIQWSSL PPSLSRMGQE VLRHREAAQV VAIEALQEAS ASESLLQCLI MYSDLLSTAK EDDPLPVVEQ FLKLHSGLKN VQVITESLSK
501: LLSLMSSPDN EENRSEEAIK AASEKQKLAA SWVQAALVTN LSPFSVYSSK QAKLAASRSK PVIILESPGN NSSSKTRGNI QNKPTIGSKL VAQGMIRKHR
601: ENSSSQKATS VAGSESPPLN WVKGNGLNEA TDLAEKLQMV SQDWFLGFVE RFLDADVITS SSLSLSDNGQ IAGMLSQLKS VNDWLDEIGS KEDEEGLQEV
701: SKETIDRLRK KIYEYLLTHV ESAAAALGGG GGSVSSPRPK PIETKAKR

Arabidopsis Description

At1g08760 [Source:UniProtKB/TrEMBL;Acc:Q9FRR2]
SUBAcon: [plastid,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.