CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
plasma membrane 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d031700_P003	Maize	cytosol, mitochondrion, plastid	93.54	93.16
Os08t0541500-01	Rice	mitochondrion, peroxisome, plastid	82.37	83.49
TraesCS7D01G268500.2	Wheat	cytosol, mitochondrion, nucleus	80.89	81.99
TraesCS7B01G166200.1	Wheat	cytosol, mitochondrion, plastid	80.48	81.58
TraesCS7A01G266300.1	Wheat	cytosol, mitochondrion, plastid	80.35	81.22
EER99187	Sorghum	cytosol, mitochondrion, nucleus	74.56	74.56
CDY05811	Canola	cytosol	11.57	66.67
CDX91320	Canola	extracellular	7.94	59.0
GSMUA_Achr5P25710_001	Banana	cytosol, plasma membrane, plastid	58.28	58.75
GSMUA_Achr11P...	Banana	cytosol, extracellular, nucleus	32.71	58.0
GSMUA_Achr3P21570_001	Banana	extracellular, peroxisome, plastid	55.18	55.26
GSMUA_Achr11P...	Banana	cytosol, nucleus, plastid	22.21	53.92
GSMUA_Achr11P...	Banana	plastid	50.2	52.83
CDY08643	Canola	mitochondrion, nucleus	8.34	50.41
VIT_05s0102g01200.t01	Wine grape	endoplasmic reticulum, extracellular, nucleus	48.32	48.58
CDY22665	Canola	extracellular, nucleus, peroxisome	40.65	48.09
Solyc06g073110.2.1	Tomato	endoplasmic reticulum, extracellular, nucleus	47.91	47.66
KRH29601	Soybean	nucleus	46.16	46.23
CDY06329	Canola	extracellular, nucleus, peroxisome	38.76	46.08
KRH24591	Soybean	nucleus	45.22	45.28
Bra031640.1-P	Field mustard	cytosol, nucleus, peroxisome	41.99	45.09
KRH23226	Soybean	nucleus	44.95	44.3
AT1G08760.1	Thale cress	cytosol, plastid, vacuole	43.88	43.58
Bra018603.1-P	Field mustard	cytosol, nucleus, vacuole	42.93	43.34
KRH10106	Soybean	nucleus	44.82	43.25
CDX93540	Canola	extracellular, nucleus, vacuole	42.8	43.21
CDX95036	Canola	extracellular, nucleus, vacuole	42.66	43.13
CDY69908	Canola	plastid	6.73	42.37
KXG28276	Sorghum	plastid	21.0	31.64
EER95393	Sorghum	cytosol	23.15	30.39
EES02630	Sorghum	cytosol, extracellular, mitochondrion, nucleus	20.46	26.62
EES09151	Sorghum	cytosol, mitochondrion, plastid	24.5	25.14
OQU86510	Sorghum	cytosol	16.15	24.54
KXG36592	Sorghum	plastid	21.13	23.79

Protein Annotations

EnsemblPlants:EES14150	EnsemblPlantsGene:SORBI_3007G184700	EntrezGene:8060907	InterPro:DUF936_pln	PANTHER:PTHR31928	PANTHER:PTHR31928:SF11
PFAM:PF06075	ProteinID:EES14150	ProteinID:EES14150.1	RefSeq:XP_002444655.1	SEG:seg	UniParc:UPI0001A87CC4
UniProt:C5YH97	MapMan:20.1.5.4.2	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:61799312..61805792

Molecular Weight (calculated)

77532.3 Da

IEP (calculated)

10.098

GRAVY (calculated)

-0.384

Length

743 amino acids

Sequence
(BLAST)

001: MASLVPGVLL KLLQHMNSDV KVGGEHRSSL LQVVSIVPAL AGSDLFTNQG FYLKVSDSSH ATYVSLPDEQ HDLILSDTIQ LGQFIHVDRL EAATPVPILR
101: GVRPVPGRHA CVGNPEDLVV TSSSSFLGSG SKAQPSVNGG GSKDAAGALS LEKEQSKLEK INASVKSNGT DSKKPQLTKS NSNLSKQALN GLLDKKDVVS
201: SKAKSTSARS TPSSPTSVHS LPASFDKLSN DIKQRVKTKG AEKSSPSRLS LLEKAASVLK ATTAGRKSSV GNSISNTLLS FESGPKALRR SWEGKADTKD
301: KGNSDSKPAK AEKKSENRSS STPRRKPLAE EKPLHKDDSK ILTPPRKSSA SAPADDSDKV VNKISSPIRR TSGVLNNPNT TNLVKVAASS RKLTDASASW
401: TTLPPSLAKL GKELLKYRDA AQMAAVEAMQ EASAAESLLR CLSSYAEVSS SAEEQNPQQA VEQFLALHGA LSRATIVTES LTKATATAST ATSPDQSAAS
501: DASTADEETL AVAAERRRRA ASWVGAGLAT DLSAFSLYNL KPAPASAISP LAVVLVDESA KPAAKASPPA KSRLSPAKGR LRAGSAAAAA AAAAAAAAAV
601: PPPEWERGGG AEERGELARR LGEEARGWFL AFVERFLDAD VAAAAPWDRD RAARMLPQLK RVNDWLSEIG KPAEMAPHPP PEADGEAAAP TANGGAASGV
701: PEETIERLRK KIYEYLLTNV DSAAAVLGGG EVAPAPVANG KKG

Best Arabidopsis Sequence Match ( AT1G08760.1 )
(BLAST)

001: MANLVPGVLL KLLQHMNTDV KIAGEHRSSL LQVISIVPAL AGGELFPNQG FYLKVSDSSH ATYVSLPDEH DDLILSDKIQ LGQYIHVDRV ESSSPVPILR
101: GVRPVPGRHP CVGDPEDIVA THSLGFLSDD KVKNDNNGGV SSKPKERVKA SVKANGSGSD GERIIGNRLS VSISRDDSSD GKKPVSALFR AKSAKSSLSL
201: DVKKESLGKL KTSSGSKSIP SSPTSCYSLP NSFAKFANGI KQQQTVKPKL LEKGSPRMGL SEKGRSLLKA ESPKVGKKLP MIKNFVQGIE FGAKALRKSW
301: EGNLDIRGSD RTKSSLPRRD LTPDSRSLAA PRRSTSSEKL PSKQERANVF ARSSKEHNKI QSTKKVEPTA VLDTKDKTSR PKSTSVEKKS VAENGLPGNL
401: VKVSVNGKRL AAANIQWSSL PPSLSRMGQE VLRHREAAQV VAIEALQEAS ASESLLQCLI MYSDLLSTAK EDDPLPVVEQ FLKLHSGLKN VQVITESLSK
501: LLSLMSSPDN EENRSEEAIK AASEKQKLAA SWVQAALVTN LSPFSVYSSK QAKLAASRSK PVIILESPGN NSSSKTRGNI QNKPTIGSKL VAQGMIRKHR
601: ENSSSQKATS VAGSESPPLN WVKGNGLNEA TDLAEKLQMV SQDWFLGFVE RFLDADVITS SSLSLSDNGQ IAGMLSQLKS VNDWLDEIGS KEDEEGLQEV
701: SKETIDRLRK KIYEYLLTHV ESAAAALGGG GGSVSSPRPK PIETKAKR

Arabidopsis Description

At1g08760 [Source:UniProtKB/TrEMBL;Acc:Q9FRR2]
SUBAcon: [plastid,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.