Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES02630 | Sorghum | cytosol, extracellular, mitochondrion, nucleus | 83.44 | 71.45 |
| Zm00001d040147_P001 | Maize | nucleus | 80.37 | 65.28 |
| Os01t0108800-01 | Rice | cytosol | 27.4 | 58.01 |
| TraesCS3A01G000300.1 | Wheat | cytosol, extracellular, mitochondrion, nucleus | 57.26 | 52.14 |
| TraesCS3D01G008800.1 | Wheat | cytosol, extracellular, mitochondrion, nucleus | 57.67 | 51.46 |
| TraesCS3B01G003800.1 | Wheat | cytosol, extracellular, mitochondrion, nucleus | 56.85 | 50.82 |
| HORVU3Hr1G000140.4 | Barley | plastid | 58.28 | 45.53 |
| GSMUA_Achr8P14440_001 | Banana | mitochondrion | 42.33 | 40.27 |
| GSMUA_Achr9P00810_001 | Banana | cytosol, mitochondrion, nucleus | 43.97 | 38.12 |
| VIT_01s0026g00030.t01 | Wine grape | mitochondrion | 43.97 | 36.32 |
| KRH69557 | Soybean | extracellular, mitochondrion, nucleus, vacuole | 40.9 | 34.9 |
| PGSC0003DMT400079598 | Potato | mitochondrion | 42.54 | 34.9 |
| Solyc05g005580.2.1 | Tomato | mitochondrion | 41.51 | 34.06 |
| KRH74610 | Soybean | cytosol, extracellular, mitochondrion, nucleus | 40.9 | 34.01 |
| CDY61547 | Canola | nucleus | 34.56 | 33.14 |
| AT1G23790.1 | Thale cress | nucleus | 34.97 | 33.01 |
| AT1G70340.1 | Thale cress | mitochondrion | 34.36 | 32.94 |
| CDX91723 | Canola | nucleus | 35.58 | 32.58 |
| CDY47633 | Canola | nucleus | 34.36 | 32.43 |
| Bra024618.1-P | Field mustard | nucleus | 34.15 | 32.36 |
| Bra016331.1-P | Field mustard | nucleus | 34.76 | 31.72 |
| CDY57317 | Canola | nucleus | 34.97 | 31.2 |
| EES14150 | Sorghum | cytosol, plasma membrane, plastid | 24.54 | 16.15 |
| EER99187 | Sorghum | cytosol, mitochondrion, nucleus | 24.34 | 16.02 |
| EER95393 | Sorghum | cytosol | 18.4 | 15.9 |
| KXG36592 | Sorghum | plastid | 18.2 | 13.48 |
| EES09151 | Sorghum | cytosol, mitochondrion, plastid | 19.43 | 13.12 |
| KXG28276 | Sorghum | plastid | 12.27 | 12.17 |
Protein Annotations
| EnsemblPlants:OQU86510 | EnsemblPlantsGene:SORBI_3003G102100 | InterPro:DUF936_pln | PANTHER:PTHR31928 | PANTHER:PTHR31928:SF6 | PFAM:PF06075 |
| ProteinID:OQU86510 | ProteinID:OQU86510.1 | SEG:seg | UniParc:UPI0009DC92D3 | UniProt:A0A1W0VWL0 | MapMan:20.1.5.4.2 |
Description
hypothetical protein
Coordinates
chr3:-:9056912..9060628
Molecular Weight (calculated)
52217.5 Da
IEP (calculated)
10.921
GRAVY (calculated)
-0.332
Length
489 amino acids
Sequence
(BLAST)
(BLAST)
001: MTTLSSGVLL KLLDGMKSAA AKPVTDIVPA ELDEKNLFPK HGKFYVKVSD ASHSIYAALP LAQSDLVLSN KPYVGQFVHV DRLDPASPVP VIVGARPLPG
101: PEQNAAIKPT TLNFDAVRMT PVEDRAGATT TPAARDRGAA ATPGRERAVA ASPATWADPS ARTPIRHWPA MSTASVRKSS SMLHRLRRLT RSKSFVADRD
201: RQQHPRIPKS PFPTEKSSVS SATAARVPVP RKLRLLGKDA IEQREQAQKV ALEAQRNASA TENVARIYKM FSELSRTASL EAPATCFESF LNFHRAAVKG
301: ITDIEALQAA TSMAAAVARD APPVLQEIAQ NRAVVRRRGV GLGAVSKSVS FAPGMLDPKQ DYGGGKVVRS SRASRKCLAM DKIGKDGGDK KRSSSSASSS
401: ATTHSPLASS LKLAKQIQTE AGSWFIDFLQ AALETSNRCC LQSLMLQVFN LVEMEQSGGG GGDSSGSRTA HPRAAAVARK PRTKAKNPC
101: PEQNAAIKPT TLNFDAVRMT PVEDRAGATT TPAARDRGAA ATPGRERAVA ASPATWADPS ARTPIRHWPA MSTASVRKSS SMLHRLRRLT RSKSFVADRD
201: RQQHPRIPKS PFPTEKSSVS SATAARVPVP RKLRLLGKDA IEQREQAQKV ALEAQRNASA TENVARIYKM FSELSRTASL EAPATCFESF LNFHRAAVKG
301: ITDIEALQAA TSMAAAVARD APPVLQEIAQ NRAVVRRRGV GLGAVSKSVS FAPGMLDPKQ DYGGGKVVRS SRASRKCLAM DKIGKDGGDK KRSSSSASSS
401: ATTHSPLASS LKLAKQIQTE AGSWFIDFLQ AALETSNRCC LQSLMLQVFN LVEMEQSGGG GGDSSGSRTA HPRAAAVARK PRTKAKNPC
001: MAALAPGILQ KLIDGMKTGV KPTGEHRSSL LQVTDIVPID LDEKNLLPKQ GFFIKVSDSS HSIYVSLPSD QDDDVLSNKM QLGQFIYVDR LDPGTPVPII
101: KGARPIPGRH PLLGTPEPLM STRGKIESSR PRRGSWGQNG DVSSPFVLKP APLDFDQCTP AKHRLGTGRF MAASPNVMTR GRSPGGVRCS YGGGLLSKMA
201: ESPAAMMRKS CVVPPSSKFP RSKSVCDRET MAKNSVLFSP FKSSAKKNDS PPPSVRTRRA TAASLLEDER EAPKSTSKYS KLEKPEKSLS LPGRLSTLSK
301: EAMQQRETAQ KIALQALREA TTTETVVRHL KTFANLSKSA KADCPAACFD KFLEFHSQIS ETMNEIASIE AAASPATTEK KSEDGSLILH EIQHNSIDQE
401: KTTSKRRILL KQQQKRSNDE NKNPAVSLSG LGNTARLVKE IEKEAANWFM EFIEKALEKG MKKCKGTSDA DVKKVPQSLI LKVVNWVEEE HSADNTKRPV
501: HPKASHITRK LRIKLKNP
101: KGARPIPGRH PLLGTPEPLM STRGKIESSR PRRGSWGQNG DVSSPFVLKP APLDFDQCTP AKHRLGTGRF MAASPNVMTR GRSPGGVRCS YGGGLLSKMA
201: ESPAAMMRKS CVVPPSSKFP RSKSVCDRET MAKNSVLFSP FKSSAKKNDS PPPSVRTRRA TAASLLEDER EAPKSTSKYS KLEKPEKSLS LPGRLSTLSK
301: EAMQQRETAQ KIALQALREA TTTETVVRHL KTFANLSKSA KADCPAACFD KFLEFHSQIS ETMNEIASIE AAASPATTEK KSEDGSLILH EIQHNSIDQE
401: KTTSKRRILL KQQQKRSNDE NKNPAVSLSG LGNTARLVKE IEKEAANWFM EFIEKALEKG MKKCKGTSDA DVKKVPQSLI LKVVNWVEEE HSADNTKRPV
501: HPKASHITRK LRIKLKNP
Arabidopsis Description
At1g23790 [Source:UniProtKB/TrEMBL;Acc:Q9ZUB7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.