CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, extracellular, nucleus, vacuole

Predictor Summary:

nucleus 3
mitochondrion 3
extracellular 1
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH74610	Soybean	cytosol, extracellular, mitochondrion, nucleus	93.54	91.16
VIT_01s0026g00030.t01	Wine grape	mitochondrion	67.54	65.37
PGSC0003DMT400079598	Potato	mitochondrion	63.35	60.91
Solyc05g005580.2.1	Tomato	mitochondrion	63.18	60.74
AT1G23790.1	Thale cress	nucleus	54.45	60.23
CDY61547	Canola	nucleus	50.44	56.67
Bra024618.1-P	Field mustard	nucleus	50.96	56.59
CDY47633	Canola	nucleus	50.96	56.37
Bra016331.1-P	Field mustard	nucleus	51.31	54.85
CDX91723	Canola	nucleus	50.96	54.68
AT1G70340.1	Thale cress	mitochondrion	48.52	54.51
CDY57317	Canola	nucleus	51.13	53.47
GSMUA_Achr8P14440_001	Banana	mitochondrion	46.6	51.95
Os01t0108800-01	Rice	cytosol	20.77	51.52
GSMUA_Achr9P00810_001	Banana	cytosol, mitochondrion, nucleus	46.07	46.81
TraesCS3A01G000300.1	Wheat	cytosol, extracellular, mitochondrion, nucleus	42.58	45.44
TraesCS3D01G008800.1	Wheat	cytosol, extracellular, mitochondrion, nucleus	42.58	44.53
EES02630	Sorghum	cytosol, extracellular, mitochondrion, nucleus	43.98	44.13
TraesCS3B01G003800.1	Wheat	cytosol, extracellular, mitochondrion, nucleus	41.71	43.69
Zm00001d040147_P001	Maize	nucleus	43.28	41.2
OQU86510	Sorghum	cytosol	34.9	40.9
HORVU3Hr1G000140.4	Barley	plastid	42.58	38.98
KRG89920	Soybean	extracellular, mitochondrion	12.57	38.92
KRH47653	Soybean	endoplasmic reticulum, nucleus, peroxisome	21.99	23.55
KRH06232	Soybean	nucleus	21.64	23.22
KRH69022	Soybean	golgi, mitochondrion	21.82	23.06
KRH24591	Soybean	nucleus	27.75	21.43
KRH29601	Soybean	nucleus	27.4	21.16
KRH23226	Soybean	nucleus	26.7	20.29
KRH10106	Soybean	nucleus	26.35	19.61
KRH13842	Soybean	plastid	19.02	19.33
KRH03797	Soybean	mitochondrion	23.39	19.03
KRH43579	Soybean	plastid	18.5	18.63
KRH56681	Soybean	vacuole	23.21	16.18

Protein Annotations

EMBL:ACUP02000721	EnsemblPlants:KRH69557	EnsemblPlantsGene:GLYMA_02G034500	EntrezGene:100797400	InterPro:DUF936_pln	PANTHER:PTHR31928
PANTHER:PTHR31928:SF20	PFAM:PF06075	ProteinID:KRH69557	ProteinID:KRH69557.1	SEG:seg	UniParc:UPI0002336E42
UniProt:I1JC21	MapMan:20.1.5.4.2	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:3193127..3195921

Molecular Weight (calculated)

62327.8 Da

IEP (calculated)

10.199

GRAVY (calculated)

-0.501

Length

573 amino acids

Sequence
(BLAST)

001: MATLAPGILL KLLNGLNTGV KPTNEHRSSL LQVTDIVPAD LDEKNLIPKQ GFFIKVSDSS HSIYASLPSD QDDIVLSNKM QLGQFIYVDR LEPGSPVPVL
101: KGAKPLPGRH PLIGTPEPLM GLRDQNQKPN SVPRRGSWGT GGDGGFNFKP VNLDFDQCTP VKVRNGGFQP VSSSPLIRGT PGSAVRCSVG GGLLLAKMSD
201: AKAESPALLR KSCVVATSNS KFARSRSVSE REHRIPASPF KSAEKKFGTT PPRLRNARVI TSSSYGDAQG QNTDTSVSSS SQSQSQSTAN SAFDNCNNLS
301: IPMNLPGKLS SLGKEAVQQR EVAQKIALQA LRDASATETV VRSLKMFSNL CKSARTDAPK ACFERFLEFH MEIVQAVNEM VSIQAATSAS ELAQKSDKQE
401: LQVLHEVMDN CENSESNLSK RRGALYKSMA VIPEKHEQKA NMGRLLRSST NQKEILEKKG STPLTKMPLG PIVENDENKK PGGSCSLSNT IKLGKQIETE
501: AGNWFMEFIE KALETGLKKT KDASDGDVRK VPQSLILKVM NWVEVEQCQS NKRPGHPKAA QVARKLRIKM KNP

Best Arabidopsis Sequence Match ( AT1G23790.1 )
(BLAST)

001: MAALAPGILQ KLIDGMKTGV KPTGEHRSSL LQVTDIVPID LDEKNLLPKQ GFFIKVSDSS HSIYVSLPSD QDDDVLSNKM QLGQFIYVDR LDPGTPVPII
101: KGARPIPGRH PLLGTPEPLM STRGKIESSR PRRGSWGQNG DVSSPFVLKP APLDFDQCTP AKHRLGTGRF MAASPNVMTR GRSPGGVRCS YGGGLLSKMA
201: ESPAAMMRKS CVVPPSSKFP RSKSVCDRET MAKNSVLFSP FKSSAKKNDS PPPSVRTRRA TAASLLEDER EAPKSTSKYS KLEKPEKSLS LPGRLSTLSK
301: EAMQQRETAQ KIALQALREA TTTETVVRHL KTFANLSKSA KADCPAACFD KFLEFHSQIS ETMNEIASIE AAASPATTEK KSEDGSLILH EIQHNSIDQE
401: KTTSKRRILL KQQQKRSNDE NKNPAVSLSG LGNTARLVKE IEKEAANWFM EFIEKALEKG MKKCKGTSDA DVKKVPQSLI LKVVNWVEEE HSADNTKRPV
501: HPKASHITRK LRIKLKNP

Arabidopsis Description

At1g23790 [Source:UniProtKB/TrEMBL;Acc:Q9ZUB7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.