CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH43579	Soybean	plastid	89.36	88.58
VIT_13s0320g00010.t01	Wine grape	cytosol	50.18	50.0
Solyc01g081640.2.1	Tomato	cytosol	42.91	38.6
PGSC0003DMT400079932	Potato	cytosol	39.36	37.12
Bra005615.1-P	Field mustard	plastid	35.28	36.38
CDY60513	Canola	plastid	34.93	36.35
CDY42075	Canola	plastid	34.93	36.01
AT2G31920.1	Thale cress	plastid	34.22	32.99
KRG89920	Soybean	extracellular, mitochondrion	9.4	28.65
KRH29601	Soybean	nucleus	31.03	23.58
KRH24591	Soybean	nucleus	30.32	23.05
KRH47653	Soybean	endoplasmic reticulum, nucleus, peroxisome	21.63	22.8
KRH23226	Soybean	nucleus	30.32	22.68
KRH06232	Soybean	nucleus	21.28	22.47
KRH69022	Soybean	golgi, mitochondrion	21.45	22.32
KRH10106	Soybean	nucleus	30.14	22.08
KRH03797	Soybean	mitochondrion	24.29	19.46
KRH69557	Soybean	extracellular, mitochondrion, nucleus, vacuole	19.33	19.02
KRH74610	Soybean	cytosol, extracellular, mitochondrion, nucleus	18.97	18.2
KRH56681	Soybean	vacuole	23.76	16.3

Protein Annotations

EMBL:ACUP02009793	EnsemblPlants:KRH13842	EnsemblPlantsGene:GLYMA_15G267500	EntrezGene:102669473	InterPro:DUF936_pln	PANTHER:PTHR31928
PANTHER:PTHR31928:SF7	PFAM:PF06075	ProteinID:KRH13842	ProteinID:KRH13842.1	SEG:seg	UniParc:UPI00023D67B7
UniProt:K7ME38	MapMan:20.1.5.4.2	:	:	:	:

Description

hypothetical protein

Coordinates

chr15:-:50377760..50382089

Molecular Weight (calculated)

62144.7 Da

IEP (calculated)

9.860

GRAVY (calculated)

-0.432

Length

564 amino acids

Sequence
(BLAST)

001: MASLTPGVLS KLLDNAGSKV TAPHRQALLQ VTEIVPRLSS TSPLQSRGYF LKLSDSLHSA YVSVPDADAD LISAGKLNLG QFVYVTRLDA ASPVPLVRGL
101: NPLPKRRPCV GNPIELVPSE RLRVTTTTTK KKKKKVEVFK RGKGSPEWKK EKGLEMMRRL SLDSSRRVWD HSPVSEGITA SASNKLKAKK SNPTLPNEID
201: KKVFSVKPDS PLKSPTSSIS PLKNKNENLC PKSLTSTPCG GTVHSQLVKV PLNCKSWRHD TPACCEDVSS PMCDLGKQVV AHRNVAFLAA VRSLEEASAT
301: DTVIQCMCMY AELCQSGQTH SPGSLVKQFL ELHLSLQRVT VLIDLLLNPF PETKSSSHST LQCLTEDACK VPARKNAISW VQAAIGTNLS KFNLFKTQAK
401: SEVLNGEKCH YVVIESSPED INTENSPAQN KQNRVTQANH LPNSTAKKLP SSKRNLLAAK NKDADKHDRS KEIKLKEVAS LAEKLLEASS EWFLKYLEES
501: LSNEYGLKNE GNIEIASLLG QLKQVNHWLD NLAGGDKVDH RVEKLRKNLY RFLLEHVNSA VTCN

Best Arabidopsis Sequence Match ( AT2G31920.1 )
(BLAST)

001: MASLTPGVLS NLLNIAAGNS PSSPPLLSSH RSPLLQVIEI VPCLSDDQWR SEAFFVKVSD SLHAAYVAVS TGDDADLIRS DEIQLGQFIY ICGGLHVEKG
101: CPVPVIRGLK PVPKRRMCVG NPSDLYSSDL LLPFTQVSVS PTTTKKKNLV ETRRLSLDSA RRSCWDQTPP VTRRRDAALL LSSPRLKSKL VLNDKSLLKI
201: ESPSKYFNCG TSPALRNKNV VKPGSPISMA SSPKDGIKSP ISKHLNCETP ALRSRYVVKP ASPISVTRSP KDGIKSLSKA VTPPVALFKV PSSHMTWSDQ
301: RMSWSGLPKT IQLLGKEVSS HRQVAVSAAV SALEEASAME SVLFSLQAFA ELCDSTKKLS TGQVVARFLD IYHNTQNTCK AVHRLLTQNR NNGSCRLVVN
401: KNATSWVQAA VVTGFSQFNL FKEPGKKGDA ADHHYIVMQN SSEKLNPKET TSSRTPSYKG AKPPATKHCS VSDRSSLEGK SSLKDSTSLA DELVQVSSQW
501: FLKYLENSLN KGSFLVKTEE TNGKESLLVH LKALNHWLDD LNLNRTETNE KVEDLRKKLQ RFLLEHIESV IGDTYNMKRK IINSI

Arabidopsis Description

Elongation factor 1-delta, putative (DUF936) [Source:UniProtKB/TrEMBL;Acc:Q9SKA8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.