Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH43579 | Soybean | plastid | 50.88 | 50.62 |
| Solyc01g081640.2.1 | Tomato | cytosol | 55.83 | 50.4 |
| KRH13842 | Soybean | plastid | 50.0 | 50.18 |
| PGSC0003DMT400079932 | Potato | cytosol | 53.0 | 50.17 |
| CDY60513 | Canola | plastid | 37.81 | 39.48 |
| Bra005615.1-P | Field mustard | plastid | 37.63 | 38.94 |
| CDY42075 | Canola | plastid | 37.63 | 38.94 |
| AT2G31920.1 | Thale cress | plastid | 39.05 | 37.78 |
| VIT_09s0002g00760.t01 | Wine grape | mitochondrion | 27.21 | 29.11 |
| VIT_05s0102g01200.t01 | Wine grape | endoplasmic reticulum, extracellular, nucleus | 34.63 | 26.52 |
| VIT_11s0016g04380.t01 | Wine grape | plastid | 31.27 | 24.93 |
| VIT_01s0026g00030.t01 | Wine grape | mitochondrion | 21.38 | 20.44 |
Protein Annotations
| ArrayExpress:VIT_13s0320g00010 | EMBL:FN594984 | EnsemblPlants:VIT_13s0320g00010.t01 | EnsemblPlantsGene:VIT_13s0320g00010 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0008017 | InterPro:DUF936_pln | PANTHER:PTHR31928 | PANTHER:PTHR31928:SF7 | PFAM:PF06075 |
| ProteinID:CBI18661 | ProteinID:CBI18661.3 | SEG:seg | UniParc:UPI0001BE1486 | UniProt:D7SSM8 | MapMan:20.1.5.4.2 |
Description
No Description!
Coordinates
chr13:+:24310704..24316057
Molecular Weight (calculated)
62017.9 Da
IEP (calculated)
9.675
GRAVY (calculated)
-0.425
Length
566 amino acids
Sequence
(BLAST)
(BLAST)
001: MASLTPGVLS KLILNAGNKD VKVFGEHRSA LLQVIEIVPS LAGGDDLWQS RGFFLKLSDS LHSAYVSVSD EDVDLISTDK IQLGQFVHVA GLDAGSPVPV
101: LRGIKPIPKR RPCVGNPKDL VSSDLLPIRS SAAKRSVLQD TKSRRASIGN GPTLECLELR RLSLDSARRA WDQSPTPKKT TPPKSSRFKT KQISTSSNVC
201: FLVSPFSVSS DKKASFKIDS SSKRSSVSIS PLKSKNEISS PKLACKPLQK DSKFKTWSDQ NISWDSLPPR IHDLGKDAAS YRNVAFLAAV NALEEASAAE
301: GVIQCMSMFA ELCESSQKDS AGPLVEQFLN LHQDMQKAAM SINALLSTRL AEVESSSCCS SQPPLAEACK NFNNKNAISW VQAALETDLS KFCLFRKQDN
401: REIRSGEKCH YIVLENSPEM KSENHSPQNK PSPRNNGGLS DSSAKGLPSP SWRRFSASKR MSAKREEWSK GSGLRETANL AKKLLSVSRG WFLKYLEDSL
501: NKGFGLKREE GGAEIACLLG QLKRVNQWLD GSVEDGMEVD ERIEGLRKKL YGFLLEHVDS AVVSGK
101: LRGIKPIPKR RPCVGNPKDL VSSDLLPIRS SAAKRSVLQD TKSRRASIGN GPTLECLELR RLSLDSARRA WDQSPTPKKT TPPKSSRFKT KQISTSSNVC
201: FLVSPFSVSS DKKASFKIDS SSKRSSVSIS PLKSKNEISS PKLACKPLQK DSKFKTWSDQ NISWDSLPPR IHDLGKDAAS YRNVAFLAAV NALEEASAAE
301: GVIQCMSMFA ELCESSQKDS AGPLVEQFLN LHQDMQKAAM SINALLSTRL AEVESSSCCS SQPPLAEACK NFNNKNAISW VQAALETDLS KFCLFRKQDN
401: REIRSGEKCH YIVLENSPEM KSENHSPQNK PSPRNNGGLS DSSAKGLPSP SWRRFSASKR MSAKREEWSK GSGLRETANL AKKLLSVSRG WFLKYLEDSL
501: NKGFGLKREE GGAEIACLLG QLKRVNQWLD GSVEDGMEVD ERIEGLRKKL YGFLLEHVDS AVVSGK
001: MASLTPGVLS NLLNIAAGNS PSSPPLLSSH RSPLLQVIEI VPCLSDDQWR SEAFFVKVSD SLHAAYVAVS TGDDADLIRS DEIQLGQFIY ICGGLHVEKG
101: CPVPVIRGLK PVPKRRMCVG NPSDLYSSDL LLPFTQVSVS PTTTKKKNLV ETRRLSLDSA RRSCWDQTPP VTRRRDAALL LSSPRLKSKL VLNDKSLLKI
201: ESPSKYFNCG TSPALRNKNV VKPGSPISMA SSPKDGIKSP ISKHLNCETP ALRSRYVVKP ASPISVTRSP KDGIKSLSKA VTPPVALFKV PSSHMTWSDQ
301: RMSWSGLPKT IQLLGKEVSS HRQVAVSAAV SALEEASAME SVLFSLQAFA ELCDSTKKLS TGQVVARFLD IYHNTQNTCK AVHRLLTQNR NNGSCRLVVN
401: KNATSWVQAA VVTGFSQFNL FKEPGKKGDA ADHHYIVMQN SSEKLNPKET TSSRTPSYKG AKPPATKHCS VSDRSSLEGK SSLKDSTSLA DELVQVSSQW
501: FLKYLENSLN KGSFLVKTEE TNGKESLLVH LKALNHWLDD LNLNRTETNE KVEDLRKKLQ RFLLEHIESV IGDTYNMKRK IINSI
101: CPVPVIRGLK PVPKRRMCVG NPSDLYSSDL LLPFTQVSVS PTTTKKKNLV ETRRLSLDSA RRSCWDQTPP VTRRRDAALL LSSPRLKSKL VLNDKSLLKI
201: ESPSKYFNCG TSPALRNKNV VKPGSPISMA SSPKDGIKSP ISKHLNCETP ALRSRYVVKP ASPISVTRSP KDGIKSLSKA VTPPVALFKV PSSHMTWSDQ
301: RMSWSGLPKT IQLLGKEVSS HRQVAVSAAV SALEEASAME SVLFSLQAFA ELCDSTKKLS TGQVVARFLD IYHNTQNTCK AVHRLLTQNR NNGSCRLVVN
401: KNATSWVQAA VVTGFSQFNL FKEPGKKGDA ADHHYIVMQN SSEKLNPKET TSSRTPSYKG AKPPATKHCS VSDRSSLEGK SSLKDSTSLA DELVQVSSQW
501: FLKYLENSLN KGSFLVKTEE TNGKESLLVH LKALNHWLDD LNLNRTETNE KVEDLRKKLQ RFLLEHIESV IGDTYNMKRK IINSI
Arabidopsis Description
Elongation factor 1-delta, putative (DUF936) [Source:UniProtKB/TrEMBL;Acc:Q9SKA8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.