Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
- plastid 4
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH13842 | Soybean | plastid | 88.58 | 89.36 |
| VIT_13s0320g00010.t01 | Wine grape | cytosol | 50.62 | 50.88 |
| Solyc01g081640.2.1 | Tomato | cytosol | 43.76 | 39.71 |
| PGSC0003DMT400079932 | Potato | cytosol | 40.77 | 38.8 |
| Bra005615.1-P | Field mustard | plastid | 35.85 | 37.29 |
| CDY60513 | Canola | plastid | 35.33 | 37.08 |
| CDY42075 | Canola | plastid | 35.5 | 36.93 |
| AT2G31920.1 | Thale cress | plastid | 34.97 | 34.02 |
| KRG89920 | Soybean | extracellular, mitochondrion | 9.49 | 29.19 |
| KRH29601 | Soybean | nucleus | 30.58 | 23.45 |
| KRH47653 | Soybean | endoplasmic reticulum, nucleus, peroxisome | 21.62 | 22.99 |
| KRH24591 | Soybean | nucleus | 29.88 | 22.91 |
| KRH69022 | Soybean | golgi, mitochondrion | 21.79 | 22.88 |
| KRH23226 | Soybean | nucleus | 30.05 | 22.68 |
| KRH06232 | Soybean | nucleus | 21.09 | 22.47 |
| KRH10106 | Soybean | nucleus | 29.88 | 22.08 |
| KRH03797 | Soybean | mitochondrion | 24.25 | 19.6 |
| KRH69557 | Soybean | extracellular, mitochondrion, nucleus, vacuole | 18.63 | 18.5 |
| KRH74610 | Soybean | cytosol, extracellular, mitochondrion, nucleus | 18.28 | 17.69 |
| KRH56681 | Soybean | vacuole | 23.9 | 16.55 |
Protein Annotations
| EMBL:ACUP02004870 | EnsemblPlants:KRH43579 | EnsemblPlantsGene:GLYMA_08G158800 | EntrezGene:100782697 | InterPro:DUF936_pln | PANTHER:PTHR31928 |
| PANTHER:PTHR31928:SF7 | PFAM:PF06075 | ProteinID:KRH43579 | ProteinID:KRH43579.1 | SEG:seg | UniParc:UPI0002338B64 |
| UniProt:K7L711 | MapMan:20.1.5.4.2 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr8:+:12313738..12317792
Molecular Weight (calculated)
62602.1 Da
IEP (calculated)
9.830
GRAVY (calculated)
-0.405
Length
569 amino acids
Sequence
(BLAST)
(BLAST)
001: MASLTPGVLS KLLDNAGSKV TAAHRQALLQ VTEIVPRLSS TSPLQSRGYF LKLSDSLHSA YVSVPDADAD LICAGKLHLG QFVYVTRLDA ASPVPLVRGL
101: NVLPRRRPCV GNPTELVPSE RLCVATPKKK KREEVVKKEK GLEMMRRLSL DSSRRVWDQS PVAKRKTASA SSLSNNLKAK KSNSNPTSLN VIDKKVVSVK
201: PDSPLKSPTS SVSPLKNKNE NLCPKSLTIT PPRKSTSTST RSPCGGTVHS PLVKVPLNFK TWCYDTPACW EDVSLPMCDL GKQVVTHRTV AFLAAVRSLE
301: EASATDSVIQ CMCMYAELCQ SGQTHSPGSL VKQFLELHLS LQRVTVLFDS LLNPLPETKS SSHSTLQCLT EDACKVPTRK NAISWVQAAV GTNLSKFNLF
401: ETQAKSEVLN GEKCHYVVIE NTPEDINTET SPAQNKQNRV TQANHLPNST AKRLPSSKRN LLAAKNKDAD KHDRSKEIKL KEAASLAEKL LEASSEWFLK
501: YLEESLSNEF GLKNEGNTEI ASLLGQLKQV NHWLDNLAGG DKVDHRVEKL RKNLYRFLLE HVNSAVTSN
101: NVLPRRRPCV GNPTELVPSE RLCVATPKKK KREEVVKKEK GLEMMRRLSL DSSRRVWDQS PVAKRKTASA SSLSNNLKAK KSNSNPTSLN VIDKKVVSVK
201: PDSPLKSPTS SVSPLKNKNE NLCPKSLTIT PPRKSTSTST RSPCGGTVHS PLVKVPLNFK TWCYDTPACW EDVSLPMCDL GKQVVTHRTV AFLAAVRSLE
301: EASATDSVIQ CMCMYAELCQ SGQTHSPGSL VKQFLELHLS LQRVTVLFDS LLNPLPETKS SSHSTLQCLT EDACKVPTRK NAISWVQAAV GTNLSKFNLF
401: ETQAKSEVLN GEKCHYVVIE NTPEDINTET SPAQNKQNRV TQANHLPNST AKRLPSSKRN LLAAKNKDAD KHDRSKEIKL KEAASLAEKL LEASSEWFLK
501: YLEESLSNEF GLKNEGNTEI ASLLGQLKQV NHWLDNLAGG DKVDHRVEKL RKNLYRFLLE HVNSAVTSN
001: MASLTPGVLS NLLNIAAGNS PSSPPLLSSH RSPLLQVIEI VPCLSDDQWR SEAFFVKVSD SLHAAYVAVS TGDDADLIRS DEIQLGQFIY ICGGLHVEKG
101: CPVPVIRGLK PVPKRRMCVG NPSDLYSSDL LLPFTQVSVS PTTTKKKNLV ETRRLSLDSA RRSCWDQTPP VTRRRDAALL LSSPRLKSKL VLNDKSLLKI
201: ESPSKYFNCG TSPALRNKNV VKPGSPISMA SSPKDGIKSP ISKHLNCETP ALRSRYVVKP ASPISVTRSP KDGIKSLSKA VTPPVALFKV PSSHMTWSDQ
301: RMSWSGLPKT IQLLGKEVSS HRQVAVSAAV SALEEASAME SVLFSLQAFA ELCDSTKKLS TGQVVARFLD IYHNTQNTCK AVHRLLTQNR NNGSCRLVVN
401: KNATSWVQAA VVTGFSQFNL FKEPGKKGDA ADHHYIVMQN SSEKLNPKET TSSRTPSYKG AKPPATKHCS VSDRSSLEGK SSLKDSTSLA DELVQVSSQW
501: FLKYLENSLN KGSFLVKTEE TNGKESLLVH LKALNHWLDD LNLNRTETNE KVEDLRKKLQ RFLLEHIESV IGDTYNMKRK IINSI
101: CPVPVIRGLK PVPKRRMCVG NPSDLYSSDL LLPFTQVSVS PTTTKKKNLV ETRRLSLDSA RRSCWDQTPP VTRRRDAALL LSSPRLKSKL VLNDKSLLKI
201: ESPSKYFNCG TSPALRNKNV VKPGSPISMA SSPKDGIKSP ISKHLNCETP ALRSRYVVKP ASPISVTRSP KDGIKSLSKA VTPPVALFKV PSSHMTWSDQ
301: RMSWSGLPKT IQLLGKEVSS HRQVAVSAAV SALEEASAME SVLFSLQAFA ELCDSTKKLS TGQVVARFLD IYHNTQNTCK AVHRLLTQNR NNGSCRLVVN
401: KNATSWVQAA VVTGFSQFNL FKEPGKKGDA ADHHYIVMQN SSEKLNPKET TSSRTPSYKG AKPPATKHCS VSDRSSLEGK SSLKDSTSLA DELVQVSSQW
501: FLKYLENSLN KGSFLVKTEE TNGKESLLVH LKALNHWLDD LNLNRTETNE KVEDLRKKLQ RFLLEHIESV IGDTYNMKRK IINSI
Arabidopsis Description
Elongation factor 1-delta, putative (DUF936) [Source:UniProtKB/TrEMBL;Acc:Q9SKA8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.