CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, extracellular, nucleus, cytosol

Predictor Summary:

nucleus 3
mitochondrion 3
extracellular 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH69557	Soybean	extracellular, mitochondrion, nucleus, vacuole	91.16	93.54
VIT_01s0026g00030.t01	Wine grape	mitochondrion	66.16	65.71
PGSC0003DMT400079598	Potato	mitochondrion	61.9	61.07
Solyc05g005580.2.1	Tomato	mitochondrion	61.56	60.74
AT1G23790.1	Thale cress	nucleus	52.72	59.85
CDY61547	Canola	nucleus	49.32	56.86
Bra024618.1-P	Field mustard	nucleus	49.83	56.78
CDY47633	Canola	nucleus	49.83	56.56
CDX91723	Canola	nucleus	49.83	54.87
Bra016331.1-P	Field mustard	nucleus	50.0	54.85
AT1G70340.1	Thale cress	mitochondrion	47.28	54.51
Os01t0108800-01	Rice	cytosol	21.09	53.68
CDY57317	Canola	nucleus	50.0	53.65
GSMUA_Achr8P14440_001	Banana	mitochondrion	45.24	51.75
GSMUA_Achr9P00810_001	Banana	cytosol, mitochondrion, nucleus	44.9	46.81
TraesCS3A01G000300.1	Wheat	cytosol, extracellular, mitochondrion, nucleus	42.35	46.37
TraesCS3D01G008800.1	Wheat	cytosol, extracellular, mitochondrion, nucleus	42.01	45.07
TraesCS3B01G003800.1	Wheat	cytosol, extracellular, mitochondrion, nucleus	41.5	44.61
EES02630	Sorghum	cytosol, extracellular, mitochondrion, nucleus	42.86	44.13
Zm00001d040147_P001	Maize	nucleus	42.35	41.36
OQU86510	Sorghum	cytosol	34.01	40.9
HORVU3Hr1G000140.4	Barley	plastid	42.35	39.78
KRG89920	Soybean	extracellular, mitochondrion	12.07	38.38
KRH47653	Soybean	endoplasmic reticulum, nucleus, peroxisome	20.92	22.99
KRH69022	Soybean	golgi, mitochondrion	20.92	22.69
KRH06232	Soybean	nucleus	20.58	22.66
KRH29601	Soybean	nucleus	27.72	21.97
KRH24591	Soybean	nucleus	27.72	21.97
KRH23226	Soybean	nucleus	27.04	21.09
KRH10106	Soybean	nucleus	26.7	20.39
KRH03797	Soybean	mitochondrion	24.32	20.31
KRH13842	Soybean	plastid	18.2	18.97
KRH43579	Soybean	plastid	17.69	18.28
KRH56681	Soybean	vacuole	24.15	17.27

Protein Annotations

EMBL:ACUP02000050	EnsemblPlants:KRH74610	EnsemblPlantsGene:GLYMA_01G031300	EntrezGene:100808883	InterPro:DUF936_pln	PANTHER:PTHR31928
PANTHER:PTHR31928:SF20	PFAM:PF06075	ProteinID:KRH74610	ProteinID:KRH74610.1	SEG:seg	UniParc:UPI0002336FF0
UniProt:I1J5A3	MapMan:20.1.5.4.2	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:3257841..3260562

Molecular Weight (calculated)

64030.6 Da

IEP (calculated)

10.199

GRAVY (calculated)

-0.562

Length

588 amino acids

Sequence
(BLAST)

001: MATLAPGILL KLLNGLNTGV KPTSEHRSSL LQVTDIVPAD LDEKNLIPKQ GFYIKVSDSS HSIYASLPSD QDDVVLSNKM QLGQFIYVDR LEPGSPVPVL
101: KGAKPLPGRH PLVGTPEPLM GLRDQNQNQN QNQKLNSAPR RGSWGTSCDG GFNFKPVNLD FEQCTPVKVR NGGFQPVSSS PLIRGKVGRE GTTPGSGVRS
201: SVGGGLLAKI SDAKVESPAL LRKSCVVATS NSKFTRSRSV SEREHRIPAS PFKSAEKKSG TPPPRLRNAR VITPSSSSSF SSGDAQGHNT DTSVASQPQS
301: QSTTNSAFDN CNNLSLPMNL PGKLSSLGKE AMQQREVAQK IALQALRDAS ATETVVRSLK MFSNLCKSAR TDAPLACFER FLEFHNEIVQ AVNEMVSIQA
401: ATSASELAQK SDKPELQVLH EVMDNCENSE SNMSKRRGAL YKSMAAIPEK HEQKANMGRL LRTSTNQKEI LQKKGSTPLT KMPLEPIVEN DENKKPGGSC
501: SLSNTIKLGK QIETEAGNWF MEFIEKALET GLKKTKDASD GDVRKVPQSL ILKVMNWVEV EQCQSNKRPS HPKAAQIARK LRIKMKNP

Best Arabidopsis Sequence Match ( AT1G23790.1 )
(BLAST)

001: MAALAPGILQ KLIDGMKTGV KPTGEHRSSL LQVTDIVPID LDEKNLLPKQ GFFIKVSDSS HSIYVSLPSD QDDDVLSNKM QLGQFIYVDR LDPGTPVPII
101: KGARPIPGRH PLLGTPEPLM STRGKIESSR PRRGSWGQNG DVSSPFVLKP APLDFDQCTP AKHRLGTGRF MAASPNVMTR GRSPGGVRCS YGGGLLSKMA
201: ESPAAMMRKS CVVPPSSKFP RSKSVCDRET MAKNSVLFSP FKSSAKKNDS PPPSVRTRRA TAASLLEDER EAPKSTSKYS KLEKPEKSLS LPGRLSTLSK
301: EAMQQRETAQ KIALQALREA TTTETVVRHL KTFANLSKSA KADCPAACFD KFLEFHSQIS ETMNEIASIE AAASPATTEK KSEDGSLILH EIQHNSIDQE
401: KTTSKRRILL KQQQKRSNDE NKNPAVSLSG LGNTARLVKE IEKEAANWFM EFIEKALEKG MKKCKGTSDA DVKKVPQSLI LKVVNWVEEE HSADNTKRPV
501: HPKASHITRK LRIKLKNP

Arabidopsis Description

At1g23790 [Source:UniProtKB/TrEMBL;Acc:Q9ZUB7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.