Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- nucleus 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES02630 | Sorghum | cytosol, extracellular, mitochondrion, nucleus | 87.54 | 92.29 |
| OQU86510 | Sorghum | cytosol | 65.28 | 80.37 |
| Os01t0108800-01 | Rice | cytosol | 29.9 | 77.92 |
| TraesCS3A01G000300.1 | Wheat | cytosol, extracellular, mitochondrion, nucleus | 63.62 | 71.32 |
| TraesCS3D01G008800.1 | Wheat | cytosol, extracellular, mitochondrion, nucleus | 63.29 | 69.53 |
| TraesCS3B01G003800.1 | Wheat | cytosol, extracellular, mitochondrion, nucleus | 62.96 | 69.29 |
| HORVU3Hr1G000140.4 | Barley | plastid | 63.62 | 61.18 |
| GSMUA_Achr8P14440_001 | Banana | mitochondrion | 45.35 | 53.11 |
| GSMUA_Achr9P00810_001 | Banana | cytosol, mitochondrion, nucleus | 45.18 | 48.23 |
| VIT_01s0026g00030.t01 | Wine grape | mitochondrion | 43.52 | 44.26 |
| KRH69557 | Soybean | extracellular, mitochondrion, nucleus, vacuole | 41.2 | 43.28 |
| PGSC0003DMT400079598 | Potato | mitochondrion | 42.69 | 43.12 |
| AT1G23790.1 | Thale cress | nucleus | 36.71 | 42.66 |
| Solyc05g005580.2.1 | Tomato | mitochondrion | 42.19 | 42.62 |
| KRH74610 | Soybean | cytosol, extracellular, mitochondrion, nucleus | 41.36 | 42.35 |
| CDY61547 | Canola | nucleus | 35.55 | 41.96 |
| Bra024618.1-P | Field mustard | nucleus | 35.22 | 41.09 |
| CDX91723 | Canola | nucleus | 36.21 | 40.82 |
| AT1G70340.1 | Thale cress | mitochondrion | 34.39 | 40.59 |
| CDY47633 | Canola | nucleus | 34.88 | 40.54 |
| Bra016331.1-P | Field mustard | nucleus | 35.71 | 40.11 |
| CDY57317 | Canola | nucleus | 35.88 | 39.42 |
| Zm00001d032126_P001 | Maize | cytosol | 9.8 | 25.21 |
| Zm00001d038770_P001 | Maize | cytosol | 9.97 | 24.0 |
| Zm00001d027907_P002 | Maize | cytosol, mitochondrion, nucleus, peroxisome | 14.12 | 23.29 |
| Zm00001d017634_P001 | Maize | cytosol | 9.14 | 22.09 |
| Zm00001d031700_P003 | Maize | cytosol, mitochondrion, plastid | 24.58 | 19.84 |
| Zm00001d021181_P005 | Maize | cytosol, mitochondrion, nucleus | 23.59 | 19.09 |
| Zm00001d006130_P001 | Maize | mitochondrion, plastid | 23.92 | 18.92 |
| Zm00001d006732_P001 | Maize | plastid | 19.1 | 17.72 |
| Zm00001d052368_P001 | Maize | cytosol, mitochondrion, plastid | 20.6 | 16.96 |
| Zm00001d012110_P001 | Maize | nucleus | 5.98 | 14.57 |
Protein Annotations
| EnsemblPlants:Zm00001d040147_P001 | EnsemblPlants:Zm00001d040147_T001 | EnsemblPlantsGene:Zm00001d040147 | EntrezGene:100272391 | InterPro:DUF936_pln | ncoils:Coil |
| PANTHER:PTHR31928 | PANTHER:PTHR31928:SF6 | PFAM:PF06075 | ProteinID:ONM30643.1 | SEG:seg | UniParc:UPI000843F326 |
| UniProt:A0A1D6MNE5 | MapMan:20.1.5.4.2 | : | : | : | : |
Description
No Description!
Coordinates
chr3:-:29191550..29194489
Molecular Weight (calculated)
63911.9 Da
IEP (calculated)
10.436
GRAVY (calculated)
-0.413
Length
602 amino acids
Sequence
(BLAST)
(BLAST)
001: MTTLSSGVLL KLLDGMKSGA AKPVGEHRTA VLQVTDIVPA ELDEKDLFPK HGKFYVKVSD ASHSIYATLP LAQADLVLSN KLHLGQFVHV DRLDPASPVP
101: VIVGARPLPG RHPLVVGTPD PAARAKPAAP RRGSWGPEQN AAIKPTTLNF DAERMTPVKE RPALSTPVKD RAGGATPARE RGAAATPGRE RTAVASPALS
201: SASLRKSSSV LPRLTRSKSF VADRDQQHPR IPKSPFPTVR SQPQLKSIGS QVESRLCLQI NVDFQFVFAQ EKSSVSCTAS RATRRVAKEE EPSSPPSDDE
301: LGSSATSTKK RSATAARVPV PGKLSLLGKD AMEQREQAQK VALEALRNAS ATDNVARIYK LFSEVSKTAR PEAPATCFDS FLSFHQEAVQ AVTDIEAIQA
401: ATSMAAAVAS DEQQLEDAPP VLQEIAQNRT VVRRRGIGLG SVSKSVSFAP GTLDPKQDDG GGKAIRSSSA SRKCLATDKI GEDGGDEKRS SSSGPSSATT
501: TTAHSALGSS LKLAKKIQAE AGSWFMDFLE AALETGLKKS KASSMGDGRK QSSCCCPQSL MLRVINWVEM EQSSGDSSGR KTAHPRAAAV ARKLRIKAKN
601: PS
101: VIVGARPLPG RHPLVVGTPD PAARAKPAAP RRGSWGPEQN AAIKPTTLNF DAERMTPVKE RPALSTPVKD RAGGATPARE RGAAATPGRE RTAVASPALS
201: SASLRKSSSV LPRLTRSKSF VADRDQQHPR IPKSPFPTVR SQPQLKSIGS QVESRLCLQI NVDFQFVFAQ EKSSVSCTAS RATRRVAKEE EPSSPPSDDE
301: LGSSATSTKK RSATAARVPV PGKLSLLGKD AMEQREQAQK VALEALRNAS ATDNVARIYK LFSEVSKTAR PEAPATCFDS FLSFHQEAVQ AVTDIEAIQA
401: ATSMAAAVAS DEQQLEDAPP VLQEIAQNRT VVRRRGIGLG SVSKSVSFAP GTLDPKQDDG GGKAIRSSSA SRKCLATDKI GEDGGDEKRS SSSGPSSATT
501: TTAHSALGSS LKLAKKIQAE AGSWFMDFLE AALETGLKKS KASSMGDGRK QSSCCCPQSL MLRVINWVEM EQSSGDSSGR KTAHPRAAAV ARKLRIKAKN
601: PS
001: MAALAPGILQ KLIDGMKTGV KPTGEHRSSL LQVTDIVPID LDEKNLLPKQ GFFIKVSDSS HSIYVSLPSD QDDDVLSNKM QLGQFIYVDR LDPGTPVPII
101: KGARPIPGRH PLLGTPEPLM STRGKIESSR PRRGSWGQNG DVSSPFVLKP APLDFDQCTP AKHRLGTGRF MAASPNVMTR GRSPGGVRCS YGGGLLSKMA
201: ESPAAMMRKS CVVPPSSKFP RSKSVCDRET MAKNSVLFSP FKSSAKKNDS PPPSVRTRRA TAASLLEDER EAPKSTSKYS KLEKPEKSLS LPGRLSTLSK
301: EAMQQRETAQ KIALQALREA TTTETVVRHL KTFANLSKSA KADCPAACFD KFLEFHSQIS ETMNEIASIE AAASPATTEK KSEDGSLILH EIQHNSIDQE
401: KTTSKRRILL KQQQKRSNDE NKNPAVSLSG LGNTARLVKE IEKEAANWFM EFIEKALEKG MKKCKGTSDA DVKKVPQSLI LKVVNWVEEE HSADNTKRPV
501: HPKASHITRK LRIKLKNP
101: KGARPIPGRH PLLGTPEPLM STRGKIESSR PRRGSWGQNG DVSSPFVLKP APLDFDQCTP AKHRLGTGRF MAASPNVMTR GRSPGGVRCS YGGGLLSKMA
201: ESPAAMMRKS CVVPPSSKFP RSKSVCDRET MAKNSVLFSP FKSSAKKNDS PPPSVRTRRA TAASLLEDER EAPKSTSKYS KLEKPEKSLS LPGRLSTLSK
301: EAMQQRETAQ KIALQALREA TTTETVVRHL KTFANLSKSA KADCPAACFD KFLEFHSQIS ETMNEIASIE AAASPATTEK KSEDGSLILH EIQHNSIDQE
401: KTTSKRRILL KQQQKRSNDE NKNPAVSLSG LGNTARLVKE IEKEAANWFM EFIEKALEKG MKKCKGTSDA DVKKVPQSLI LKVVNWVEEE HSADNTKRPV
501: HPKASHITRK LRIKLKNP
Arabidopsis Description
At1g23790 [Source:UniProtKB/TrEMBL;Acc:Q9ZUB7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.