Factsheet for GSMUA_Achr8P14440_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 3
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P00810_001	Banana	cytosol, mitochondrion, nucleus	68.87	62.77
Os01t0108800-01	Rice	cytosol	25.88	57.58
TraesCS3A01G000300.1	Wheat	cytosol, extracellular, mitochondrion, nucleus	52.33	50.09
TraesCS3D01G008800.1	Wheat	cytosol, extracellular, mitochondrion, nucleus	52.53	49.27
TraesCS3B01G003800.1	Wheat	cytosol, extracellular, mitochondrion, nucleus	52.33	49.18
EES02630	Sorghum	cytosol, extracellular, mitochondrion, nucleus	52.72	47.46
KRH69557	Soybean	extracellular, mitochondrion, nucleus, vacuole	51.95	46.6
VIT_01s0026g00030.t01	Wine grape	mitochondrion	53.5	46.45
AT1G23790.1	Thale cress	nucleus	46.5	46.14
Zm00001d040147_P001	Maize	nucleus	53.11	45.35
KRH74610	Soybean	cytosol, extracellular, mitochondrion, nucleus	51.75	45.24
CDY61547	Canola	nucleus	44.55	44.9
HORVU3Hr1G000140.4	Barley	plastid	54.09	44.41
Bra024618.1-P	Field mustard	nucleus	44.55	44.38
Solyc05g005580.2.1	Tomato	mitochondrion	50.97	43.96
PGSC0003DMT400079598	Potato	mitochondrion	50.97	43.96
AT1G70340.1	Thale cress	mitochondrion	43.39	43.73
CDY47633	Canola	nucleus	43.97	43.63
Bra016331.1-P	Field mustard	nucleus	45.33	43.47
CDX91723	Canola	nucleus	44.94	43.26
CDY57317	Canola	nucleus	45.14	42.34
OQU86510	Sorghum	cytosol	40.27	42.33
GSMUA_Achr1P21840_001	Banana	extracellular	23.93	22.99
GSMUA_Achr11P...	Banana	cytosol, extracellular, nucleus	18.09	22.2
GSMUA_Achr4P10950_001	Banana	cytosol, mitochondrion, nucleus	24.12	21.2
GSMUA_Achr5P25710_001	Banana	cytosol, plasma membrane, plastid	29.77	20.76
GSMUA_Achr3P21570_001	Banana	extracellular, peroxisome, plastid	29.57	20.49
GSMUA_Achr7P21900_001	Banana	mitochondrion	27.24	20.35
GSMUA_Achr11P...	Banana	plastid	27.24	19.83
GSMUA_Achr4P10330_001	Banana	mitochondrion	28.02	19.75
GSMUA_Achr4P03420_001	Banana	cytosol	21.98	19.09
GSMUA_Achr11P...	Banana	cytosol, nucleus, plastid	8.17	13.73
GSMUA_Achr9P08220_001	Banana	mitochondrion	27.63	13.22

Protein Annotations

EnsemblPlants:GSMUA_Achr8P14440_001	EnsemblPlants:GSMUA_Achr8T14440_001	EnsemblPlantsGene:GSMUA_Achr8G14440_001	InterPro:DUF936_pln	ncoils:Coil	PANTHER:PTHR31928
PANTHER:PTHR31928:SF6	PFAM:PF06075	UniParc:UPI000294B11F	UniProt:M0TQE7	MapMan:20.1.5.4.2	:

Description

Putative expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr8G14440_001]

Coordinates

chr8:-:11424525..11426474

Molecular Weight (calculated)

55492.7 Da

IEP (calculated)

8.989

GRAVY (calculated)

-0.506

Length

514 amino acids

Sequence
(BLAST)

001: MAALAPGVLM KLLNGMNTGS QKPVGEHRTA LLQVTDIVPA DLDEKDLWPK HGFYIKLSDS SNSIYASLPF DQDDLVLSNK LQLGQFIHVD RLEPGSPVPV
101: LVGAKPLPGR HPLMGTPEPI VRCRGSGEKS SARHATASSV PRRGSWEQNP VIKPTALDFE DKTPGKGRTH GGMSDAKEAS SAAVRKSCSI SRFSRSKTVA
201: ERDPKIPKSP FPSVVKDVTH TPMTKLRSAA RDAEDSRWAS SDEQSSSTTI DNTHYHLSEE CDTAKQSSSE GMSLPGRLSV LGKEALEHRE AAQKAALQAL
301: RDASATESVV RVVRTFSELS SSAKPEAPAA CFDQFLSFHQ EIVQAVADIE AIQAATLITP PPQEESTKNQ IDKDDASILR ERDHNSNNST ATSTKRRAVA
401: ASKSKGQDDT GAEEVKAPTS SLGSSIKLAK QIRGEAGKWF MEFLETALES GLKKVKGSMG GGDGLMAVVS CPQSLILRVI NWVELEQCES SSKKPLHPRA
501: AQIARRLRIK AKNP

Best Arabidopsis Sequence Match ( AT1G23790.1 )
(BLAST)

001: MAALAPGILQ KLIDGMKTGV KPTGEHRSSL LQVTDIVPID LDEKNLLPKQ GFFIKVSDSS HSIYVSLPSD QDDDVLSNKM QLGQFIYVDR LDPGTPVPII
101: KGARPIPGRH PLLGTPEPLM STRGKIESSR PRRGSWGQNG DVSSPFVLKP APLDFDQCTP AKHRLGTGRF MAASPNVMTR GRSPGGVRCS YGGGLLSKMA
201: ESPAAMMRKS CVVPPSSKFP RSKSVCDRET MAKNSVLFSP FKSSAKKNDS PPPSVRTRRA TAASLLEDER EAPKSTSKYS KLEKPEKSLS LPGRLSTLSK
301: EAMQQRETAQ KIALQALREA TTTETVVRHL KTFANLSKSA KADCPAACFD KFLEFHSQIS ETMNEIASIE AAASPATTEK KSEDGSLILH EIQHNSIDQE
401: KTTSKRRILL KQQQKRSNDE NKNPAVSLSG LGNTARLVKE IEKEAANWFM EFIEKALEKG MKKCKGTSDA DVKKVPQSLI LKVVNWVEEE HSADNTKRPV
501: HPKASHITRK LRIKLKNP

Arabidopsis Description

At1g23790 [Source:UniProtKB/TrEMBL;Acc:Q9ZUB7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.