Factsheet for GSMUA_Achr11P26540_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P25710_001	Banana	cytosol, plasma membrane, plastid	75.16	31.21
GSMUA_Achr3P21570_001	Banana	extracellular, peroxisome, plastid	68.95	28.44
GSMUA_Achr11P...	Banana	plastid	64.38	27.9
EER99187	Sorghum	cytosol, mitochondrion, nucleus	54.25	22.34
EES14150	Sorghum	cytosol, plasma membrane, plastid	53.92	22.21
Zm00001d006130_P001	Maize	mitochondrion, plastid	53.59	21.55
Zm00001d021181_P005	Maize	cytosol, mitochondrion, nucleus	52.29	21.51
Os08t0541500-01	Rice	mitochondrion, peroxisome, plastid	51.31	21.42
TraesCS7D01G268500.2	Wheat	cytosol, mitochondrion, nucleus	51.31	21.42
TraesCS5D01G309900.1	Wheat	cytosol, mitochondrion, plastid	52.29	21.39
Zm00001d031700_P003	Maize	cytosol, mitochondrion, plastid	51.96	21.31
TraesCS5B01G303400.1	Wheat	cytosol, mitochondrion, plastid	51.96	21.17
TraesCS7B01G166200.1	Wheat	cytosol, mitochondrion, plastid	50.65	21.15
TraesCS7A01G266300.1	Wheat	cytosol, mitochondrion, plastid	50.65	21.09
HORVU5Hr1G079460.1	Barley	cytosol, mitochondrion, plastid	51.63	21.01
TraesCS5A01G303100.1	Wheat	cytosol, mitochondrion, plastid	51.31	20.91
VIT_05s0102g01200.t01	Wine grape	endoplasmic reticulum, extracellular, nucleus	47.39	19.62
Solyc06g073110.2.1	Tomato	endoplasmic reticulum, extracellular, nucleus	45.1	18.47
CDY22665	Canola	extracellular, nucleus, peroxisome	36.6	17.83
KRH29601	Soybean	nucleus	43.14	17.79
KRH24591	Soybean	nucleus	42.48	17.52
KRH23226	Soybean	nucleus	42.81	17.37
Bra031640.1-P	Field mustard	cytosol, nucleus, peroxisome	39.22	17.34
AT1G08760.1	Thale cress	cytosol, plastid, vacuole	41.18	16.84
Bra018603.1-P	Field mustard	cytosol, nucleus, vacuole	39.87	16.58
CDX93540	Canola	extracellular, nucleus, vacuole	39.87	16.58
KRH10106	Soybean	nucleus	41.5	16.49
CDX95036	Canola	extracellular, nucleus, vacuole	39.54	16.46
CDY06329	Canola	extracellular, nucleus, peroxisome	31.7	15.52
GSMUA_Achr9P08220_001	Banana	mitochondrion	48.69	13.87
GSMUA_Achr4P10950_001	Banana	cytosol, mitochondrion, nucleus	24.51	12.82
GSMUA_Achr4P03420_001	Banana	cytosol	24.51	12.67
GSMUA_Achr1P21840_001	Banana	extracellular	20.59	11.78
GSMUA_Achr7P21900_001	Banana	mitochondrion	26.47	11.77
GSMUA_Achr4P10330_001	Banana	mitochondrion	26.8	11.25
GSMUA_Achr8P14440_001	Banana	mitochondrion	13.73	8.17
GSMUA_Achr9P00810_001	Banana	cytosol, mitochondrion, nucleus	14.71	7.98
Os09t0516700-01	Rice	cytosol, extracellular, nucleus	4.58	3.02
CDY69908	Canola	plastid	0.65	1.69
GSMUA_Achr11P...	Banana	cytosol, extracellular, nucleus	0.65	0.48
CDY08643	Canola	mitochondrion, nucleus	0.0	0.0
CDY05811	Canola	cytosol	0.0	0.0
CDX91320	Canola	extracellular	0.0	0.0

Protein Annotations

EnsemblPlants:GSMUA_Achr11P26540_001	EnsemblPlants:GSMUA_Achr11T26540_001	EnsemblPlantsGene:GSMUA_Achr11G26540_001	InterPro:DUF936_pln	PANTHER:PTHR31928	PANTHER:PTHR31928:SF11
PFAM:PF06075	SEG:seg	UniParc:UPI00029481CC	UniProt:M0RVN4	MapMan:35.2	:

Description

expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr11G26540_001]

Coordinates

chr11:+:25342966..25345580

Molecular Weight (calculated)

32120.4 Da

IEP (calculated)

5.752

GRAVY (calculated)

-0.426

Length

306 amino acids

Sequence
(BLAST)

001: MQEASASETL IRCLSMYAEL STTSKEDNPQ PAVEHFLALH SSLSRAATVT DSLSKTKSRS LAATSPETLP GVDPIPEEVL RASADSRRRA TSWVSAALAT
101: DLSPFSLYDH KPSPASAASS AVVVLEGSSK TAVASSKVSH QSKSRSSPAL ASATRGKARG AAPPSPPPEW QRGGGLEEGA ALARALEGEA QVWFLGFVER
201: FLDTDAAAPG PSDREQVAAM LSQLKRVNDW LEAIGRRRSE GEADSEPEDG EGPGEGVPTE TVERLRKKIY EYLLTHVESA AVALGGGVQL SAPQPPASAG
301: RPGRRG

Best Arabidopsis Sequence Match ( AT1G08760.1 )
(BLAST)

001: MANLVPGVLL KLLQHMNTDV KIAGEHRSSL LQVISIVPAL AGGELFPNQG FYLKVSDSSH ATYVSLPDEH DDLILSDKIQ LGQYIHVDRV ESSSPVPILR
101: GVRPVPGRHP CVGDPEDIVA THSLGFLSDD KVKNDNNGGV SSKPKERVKA SVKANGSGSD GERIIGNRLS VSISRDDSSD GKKPVSALFR AKSAKSSLSL
201: DVKKESLGKL KTSSGSKSIP SSPTSCYSLP NSFAKFANGI KQQQTVKPKL LEKGSPRMGL SEKGRSLLKA ESPKVGKKLP MIKNFVQGIE FGAKALRKSW
301: EGNLDIRGSD RTKSSLPRRD LTPDSRSLAA PRRSTSSEKL PSKQERANVF ARSSKEHNKI QSTKKVEPTA VLDTKDKTSR PKSTSVEKKS VAENGLPGNL
401: VKVSVNGKRL AAANIQWSSL PPSLSRMGQE VLRHREAAQV VAIEALQEAS ASESLLQCLI MYSDLLSTAK EDDPLPVVEQ FLKLHSGLKN VQVITESLSK
501: LLSLMSSPDN EENRSEEAIK AASEKQKLAA SWVQAALVTN LSPFSVYSSK QAKLAASRSK PVIILESPGN NSSSKTRGNI QNKPTIGSKL VAQGMIRKHR
601: ENSSSQKATS VAGSESPPLN WVKGNGLNEA TDLAEKLQMV SQDWFLGFVE RFLDADVITS SSLSLSDNGQ IAGMLSQLKS VNDWLDEIGS KEDEEGLQEV
701: SKETIDRLRK KIYEYLLTHV ESAAAALGGG GGSVSSPRPK PIETKAKR

Arabidopsis Description

At1g08760 [Source:UniProtKB/TrEMBL;Acc:Q9FRR2]
SUBAcon: [plastid,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.