Factsheet for GSMUA_Achr7P21900_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
nucleus 3
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P10330_001	Banana	mitochondrion	75.44	71.19
Os12t0120000-01	Rice	cytosol, mitochondrion, nucleus	52.62	51.13
Os11t0120200-01	Rice	cytosol, mitochondrion, nucleus	52.62	51.13
TraesCS4B01G123300.1	Wheat	mitochondrion	51.31	50.28
VIT_11s0016g04380.t01	Wine grape	plastid	51.6	50.0
TraesCS4A01G192100.1	Wheat	mitochondrion	51.02	49.58
HORVU4Hr1G024210.1	Barley	mitochondrion	50.87	49.23
EES09151	Sorghum	cytosol, mitochondrion, plastid	51.45	48.9
TraesCS4D01G121400.1	Wheat	mitochondrion	51.31	48.89
Solyc12g007020.1.1	Tomato	mitochondrion	48.55	48.76
PGSC0003DMT400001026	Potato	mitochondrion	48.69	48.69
CDY69222	Canola	mitochondrion, plastid	29.8	48.35
KRH03797	Soybean	mitochondrion	48.84	47.73
Zm00001d052368_P001	Maize	cytosol, mitochondrion, plastid	50.15	47.2
Bra032701.1-P	Field mustard	mitochondrion	42.3	46.19
HORVU4Hr1G024120.1	Barley	plastid	50.87	46.17
CDY01127	Canola	mitochondrion	42.01	45.87
Bra034878.1-P	Field mustard	mitochondrion	43.17	45.48
AT4G13370.1	Thale cress	endoplasmic reticulum, mitochondrion	44.33	45.32
CDY64935	Canola	mitochondrion	42.88	45.11
CDY43695	Canola	mitochondrion	42.88	44.43
KRH56681	Soybean	vacuole	48.55	40.63
GSMUA_Achr1P21840_001	Banana	extracellular	22.97	29.53
GSMUA_Achr11P...	Banana	cytosol, extracellular, nucleus	17.59	28.88
GSMUA_Achr5P25710_001	Banana	cytosol, plasma membrane, plastid	30.09	28.09
GSMUA_Achr3P21570_001	Banana	extracellular, peroxisome, plastid	29.8	27.63
GSMUA_Achr8P14440_001	Banana	mitochondrion	20.35	27.24
GSMUA_Achr11P...	Banana	cytosol, nucleus, plastid	11.77	26.47
GSMUA_Achr4P03420_001	Banana	cytosol	22.24	25.84
GSMUA_Achr11P...	Banana	plastid	26.16	25.5
GSMUA_Achr9P00810_001	Banana	cytosol, mitochondrion, nucleus	20.49	25.0
GSMUA_Achr4P10950_001	Banana	cytosol, mitochondrion, nucleus	21.22	24.96
GSMUA_Achr9P08220_001	Banana	mitochondrion	28.2	18.06

Protein Annotations

EnsemblPlants:GSMUA_Achr7P21900_001	EnsemblPlants:GSMUA_Achr7T21900_001	EnsemblPlantsGene:GSMUA_Achr7G21900_001	InterPro:DUF936_pln	ncoils:Coil	PANTHER:PTHR31928
PANTHER:PTHR31928:SF3	PFAM:PF06075	SEG:seg	UniParc:UPI0002960956	UniProt:M0TJM6	MapMan:20.1.5.4.2

Description

expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr7G21900_001]

Coordinates

chr7:+:24535471..24537876

Molecular Weight (calculated)

73422.9 Da

IEP (calculated)

10.177

GRAVY (calculated)

-0.424

Length

688 amino acids

Sequence
(BLAST)

001: MASLTPGALL KLLQSMNSDA RVAGEHRSSV LQVTGIVPAI SASAEEDLWP SHGFYLQLSD SANSTYVALS DADADVVLSS RPQLGQLVHV DRLQFAYPVP
101: RAIGLRPVPG SRPYPFLGSP DPLVARSSPD HRGFVIQPAS PTDAGHPFHF SSSLGSNPSR LEEEKRTVFA AKENVVSSGK NHGDAAQKPR RFPSPAAAKL
201: AARKSGPGSG NGSGEQPRDP SPVLKMSSRP SSPASMGRAA SRASSPIPSK CEVPSLVAAK EENRRVAREP AIIVPSRYRQ PSPVRKAAAS PMGRRGSMSP
301: ARRPSGGLKV SSPAAGEGGG KKKVGLVVAG ISRASDALVS SVKSIRKSWD DPSASAVGSE SKEKGGSKSK VDKESILRTQ VAISRRLSDA GGLPNSNEEA
401: ASNDMPRTSR KMESFSESEK PNSMSPRVTV HDRKWTDGSV PFDSVSNNLA RLGKEALHRR NSASTAAAEA LEEALVTESV VRSLSMFSDL CSASKPGNPV
501: PTIDRFLSVY GYVLRWCGTA ESPSAGRKAD GPKDAMLWVE AALATDLEVL HLISKETECL PKPPFPQVDP PREESPANTG TRGRGVSETV DLAKALRREM
601: QIWFMKFVEE AMDVGFRLLG ENADNNKVAA VLSQLKRIND WLDGVMGRTA EAEEALKEKI ERLKRKIYGF VITHVGSAFD ASLSFATA

Best Arabidopsis Sequence Match ( AT4G13370.1 )
(BLAST)

001: MASLAPGILL KLLQCMNSGT RPTGDHRSAI LQVTGIVPAL AGSDLWPNQG FYVQISDSLN STYVSLSERD TDLILSNRLQ LGQFIYLERL EFATPVPRAA
101: GIRPVAGRHA FVGKPEPLIA RVSNGSKRDF VIQPVSDSEY SLDPIAVYLN NRRIDDDGDS DVKPNVRQAL APVNQNEENR NQIRNQKPKT TPQRFSSPAS
201: SKRSVSSGKK NCSGAVAVTV ERDPSPVVSG KGRRSASPVP SKCVVPSLAA AREENRKVAR EPSIVVPSRY RQPSPNGRKM NPSPSGRRMS ISPGRRLSSG
301: LKMTPMVGDS SGKKKMAVIA AGISKVSEAL VGSSAKNGNR KNWEEPLAGD GSAKNKPDHQ AILRTQAAMT RRLSDANRRK SGSSSSVCEE KAKSCSSESS
401: LLEEVSAFEG LGITYHERKW TDGSVPLDSI SDELAKLGKE AMKRRDFAAK AAARALEEAN ANECIIRCLS KFSELSSASK VGNPLRIINE FLKIYEDVMK
501: YSKIASENSF SLSSDQQNPI SLWVEAALAT NLEVVSLVKS HESPSSLKKS MPTRLSPRPS SKTDNIVGMW TDLDGLKETA KFAVNLQSEM QVWFIEFVEE
601: SLDNKNAAKR SLDGSSIAAV LSQLKQVNEW LDRVSSNQEN KITTMDKIER LKRKIYGFVI HHVGSTYDNS ASS

Arabidopsis Description

At4g13370 [Source:UniProtKB/TrEMBL;Acc:Q9T0K8]
SUBAcon: [mitochondrion,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.