Factsheet for GSMUA_Achr11P14970_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 5
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P25710_001	Banana	cytosol, plasma membrane, plastid	67.71	64.86
GSMUA_Achr11P...	Banana	cytosol, nucleus, plastid	27.9	64.38
GSMUA_Achr3P21570_001	Banana	extracellular, peroxisome, plastid	67.0	63.75
CDY05811	Canola	cytosol	11.47	62.79
GSMUA_Achr11P...	Banana	cytosol, extracellular, nucleus	36.54	61.58
CDX91320	Canola	extracellular	8.36	59.0
Os09t0516700-01	Rice	cytosol, extracellular, nucleus	33.57	51.19
Os08t0541500-01	Rice	mitochondrion, peroxisome, plastid	52.27	50.34
EES14150	Sorghum	cytosol, plasma membrane, plastid	52.83	50.2
TraesCS7B01G166200.1	Wheat	cytosol, mitochondrion, plastid	51.7	49.8
TraesCS7D01G268500.2	Wheat	cytosol, mitochondrion, nucleus	51.7	49.8
TraesCS7A01G266300.1	Wheat	cytosol, mitochondrion, plastid	51.13	49.12
Zm00001d031700_P003	Maize	cytosol, mitochondrion, plastid	51.7	48.93
CDY08643	Canola	mitochondrion, nucleus	8.36	47.97
EER99187	Sorghum	cytosol, mitochondrion, nucleus	50.42	47.91
TraesCS5D01G309900.1	Wheat	cytosol, mitochondrion, plastid	50.28	47.46
TraesCS5B01G303400.1	Wheat	cytosol, mitochondrion, plastid	50.28	47.27
HORVU5Hr1G079460.1	Barley	cytosol, mitochondrion, plastid	50.28	47.21
Zm00001d021181_P005	Maize	cytosol, mitochondrion, nucleus	49.15	46.64
TraesCS5A01G303100.1	Wheat	cytosol, mitochondrion, plastid	49.58	46.6
VIT_05s0102g01200.t01	Wine grape	endoplasmic reticulum, extracellular, nucleus	48.44	46.28
Zm00001d006130_P001	Maize	mitochondrion, plastid	48.58	45.07
CDY22665	Canola	extracellular, nucleus, peroxisome	39.66	44.59
Solyc06g073110.2.1	Tomato	endoplasmic reticulum, extracellular, nucleus	46.18	43.64
CDY06329	Canola	extracellular, nucleus, peroxisome	38.24	43.2
KRH29601	Soybean	nucleus	45.33	43.13
KRH24591	Soybean	nucleus	44.76	42.59
CDY69908	Canola	plastid	7.08	42.37
Bra031640.1-P	Field mustard	cytosol, nucleus, peroxisome	40.79	41.62
KRH23226	Soybean	nucleus	44.33	41.51
KRH10106	Soybean	nucleus	44.62	40.91
Bra018603.1-P	Field mustard	cytosol, nucleus, vacuole	42.35	40.62
CDX95036	Canola	extracellular, nucleus, vacuole	42.21	40.54
CDX93540	Canola	extracellular, nucleus, vacuole	42.21	40.49
AT1G08760.1	Thale cress	cytosol, plastid, vacuole	42.63	40.24
GSMUA_Achr9P08220_001	Banana	mitochondrion	48.58	31.94
GSMUA_Achr1P21840_001	Banana	extracellular	23.51	31.03
GSMUA_Achr4P03420_001	Banana	cytosol	23.37	27.87
GSMUA_Achr4P10950_001	Banana	cytosol, mitochondrion, nucleus	23.09	27.86
GSMUA_Achr8P14440_001	Banana	mitochondrion	19.83	27.24
GSMUA_Achr4P10330_001	Banana	mitochondrion	27.2	26.34
GSMUA_Achr7P21900_001	Banana	mitochondrion	25.5	26.16
GSMUA_Achr9P00810_001	Banana	cytosol, mitochondrion, nucleus	18.84	23.58

Protein Annotations

EnsemblPlants:GSMUA_Achr11P14970_001	EnsemblPlants:GSMUA_Achr11T14970_001	EnsemblPlantsGene:GSMUA_Achr11G14970_001	InterPro:DUF936_pln	PANTHER:PTHR31928	PANTHER:PTHR31928:SF11
PFAM:PF06075	SEG:seg	UniParc:UPI00029590E2	UniProt:M0RSC7	MapMan:20.1.5.4.2	:

Description

expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr11G14970_001]

Coordinates

chr11:+:16464059..16468454

Molecular Weight (calculated)

75818.8 Da

IEP (calculated)

10.266

GRAVY (calculated)

-0.433

Length

706 amino acids

Sequence
(BLAST)

001: MAASLVPGVL IKLLQHLNTN VKVGSKHRSS LLQVVSIVPA LSGSDLFTNQ GFYLKVSDSS HATYVSLPDE HNDLISSDKI QLGQFIHVDG IEAGSPVPIL
101: KGVRPLPGRH PCVGNPEDIV AANSSHGFLD AEKPQQSSDT SCNINTTSVN EKSKLGNSKL AIKTQEVQKK RASLGKSGSF QSKQLASDKL GKDGISVRLK
201: SMDSWSITSS PTSVCTLPAS FEKFSFEKFS NETKKQAQAQ RPEKPLSRFR LLDKAASVLK VNNVGRKSSA GNFLRNLVPD IELDPNGLRK SWVEKVEAKG
301: WDSSTLKAAK LETRSKSKST SAPQQKSSTN EKLLTKKDSK IQTTMKKTNA KAATDDSDRS AKRRPSVIKK KWTDSSVSWS SLPSSLAELG KELLKYRDAA
401: QLAAVEAVQE ASAADSLIRC LSMYAEISTS AKEDNPRPTV EQFLALYASL RNATAVTDSL SKTTLQTLPV TAPGQSLSGD PTLEEALKVS ADVRRRAVSW
501: VGAAVATDLA PFSLYDHKPS SASTASRAVL VLEGPSKTAA ATAPSKATQT KSRLSLTSVS VGRGNARGPA APPSPPPEWE REVGPNEGAR LVRTLREESR
601: AWFLGFVERF VDAEAAARGR SNRQQLAAML SQLKKVNEWL EAIGCHRSDG EAVDGEGSGD VPAETVERLR KKIYEYLLTH VESVAVAVGG ACPPSQAVVG
701: RSGRRG

Best Arabidopsis Sequence Match ( AT1G08760.1 )
(BLAST)

001: MANLVPGVLL KLLQHMNTDV KIAGEHRSSL LQVISIVPAL AGGELFPNQG FYLKVSDSSH ATYVSLPDEH DDLILSDKIQ LGQYIHVDRV ESSSPVPILR
101: GVRPVPGRHP CVGDPEDIVA THSLGFLSDD KVKNDNNGGV SSKPKERVKA SVKANGSGSD GERIIGNRLS VSISRDDSSD GKKPVSALFR AKSAKSSLSL
201: DVKKESLGKL KTSSGSKSIP SSPTSCYSLP NSFAKFANGI KQQQTVKPKL LEKGSPRMGL SEKGRSLLKA ESPKVGKKLP MIKNFVQGIE FGAKALRKSW
301: EGNLDIRGSD RTKSSLPRRD LTPDSRSLAA PRRSTSSEKL PSKQERANVF ARSSKEHNKI QSTKKVEPTA VLDTKDKTSR PKSTSVEKKS VAENGLPGNL
401: VKVSVNGKRL AAANIQWSSL PPSLSRMGQE VLRHREAAQV VAIEALQEAS ASESLLQCLI MYSDLLSTAK EDDPLPVVEQ FLKLHSGLKN VQVITESLSK
501: LLSLMSSPDN EENRSEEAIK AASEKQKLAA SWVQAALVTN LSPFSVYSSK QAKLAASRSK PVIILESPGN NSSSKTRGNI QNKPTIGSKL VAQGMIRKHR
601: ENSSSQKATS VAGSESPPLN WVKGNGLNEA TDLAEKLQMV SQDWFLGFVE RFLDADVITS SSLSLSDNGQ IAGMLSQLKS VNDWLDEIGS KEDEEGLQEV
701: SKETIDRLRK KIYEYLLTHV ESAAAALGGG GGSVSSPRPK PIETKAKR

Arabidopsis Description

At1g08760 [Source:UniProtKB/TrEMBL;Acc:Q9FRR2]
SUBAcon: [plastid,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.