Factsheet for GSMUA_Achr4P10330_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 4
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P21900_001	Banana	mitochondrion	71.19	75.44
Os11t0120200-01	Rice	cytosol, mitochondrion, nucleus	50.89	52.4
Os12t0120000-01	Rice	cytosol, mitochondrion, nucleus	50.48	51.98
VIT_11s0016g04380.t01	Wine grape	plastid	50.07	51.41
TraesCS4A01G192100.1	Wheat	mitochondrion	49.79	51.27
TraesCS4B01G123300.1	Wheat	mitochondrion	49.11	51.0
HORVU4Hr1G024210.1	Barley	mitochondrion	48.83	50.07
KRH03797	Soybean	mitochondrion	48.15	49.86
PGSC0003DMT400001026	Potato	mitochondrion	47.05	49.85
TraesCS4D01G121400.1	Wheat	mitochondrion	49.25	49.72
Solyc12g007020.1.1	Tomato	mitochondrion	46.64	49.63
EES09151	Sorghum	cytosol, mitochondrion, plastid	48.97	49.31
CDY69222	Canola	mitochondrion, plastid	28.4	48.82
Zm00001d052368_P001	Maize	cytosol, mitochondrion, plastid	48.15	48.02
HORVU4Hr1G024120.1	Barley	plastid	48.83	46.97
Bra034878.1-P	Field mustard	mitochondrion	41.56	46.4
Bra032701.1-P	Field mustard	mitochondrion	40.05	46.35
AT4G13370.1	Thale cress	endoplasmic reticulum, mitochondrion	42.52	46.06
CDY01127	Canola	mitochondrion	39.51	45.71
CDY43695	Canola	mitochondrion	41.43	45.48
CDY64935	Canola	mitochondrion	40.19	44.8
KRH56681	Soybean	vacuole	48.42	42.94
GSMUA_Achr11P...	Banana	cytosol, extracellular, nucleus	17.28	30.07
GSMUA_Achr5P25710_001	Banana	cytosol, plasma membrane, plastid	29.49	29.17
GSMUA_Achr1P21840_001	Banana	extracellular	21.26	28.97
GSMUA_Achr3P21570_001	Banana	extracellular, peroxisome, plastid	28.94	28.44
GSMUA_Achr8P14440_001	Banana	mitochondrion	19.75	28.02
GSMUA_Achr11P...	Banana	plastid	26.34	27.2
GSMUA_Achr11P...	Banana	cytosol, nucleus, plastid	11.25	26.8
GSMUA_Achr4P03420_001	Banana	cytosol	21.4	26.35
GSMUA_Achr4P10950_001	Banana	cytosol, mitochondrion, nucleus	20.99	26.15
GSMUA_Achr9P00810_001	Banana	cytosol, mitochondrion, nucleus	19.07	24.65
GSMUA_Achr9P08220_001	Banana	mitochondrion	27.43	18.62

Protein Annotations

EnsemblPlants:GSMUA_Achr4P10330_001	EnsemblPlants:GSMUA_Achr4T10330_001	EnsemblPlantsGene:GSMUA_Achr4G10330_001	InterPro:DUF936_pln	PANTHER:PTHR31928	PANTHER:PTHR31928:SF3
PFAM:PF06075	SEG:seg	UniParc:UPI0002952AC0	UniProt:M0SMQ0	MapMan:20.1.5.4.2	:

Description

expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr4G10330_001]

Coordinates

chr4:+:7503853..7507132

Molecular Weight (calculated)

77942.4 Da

IEP (calculated)

10.316

GRAVY (calculated)

-0.354

Length

729 amino acids

Sequence
(BLAST)

001: MASLTPGVLL KLLQSMNTDA RVAGEHRSAI LQVVGIVPAL SASTGDDLWP SHGFYLQLSD SVNSTYVSLS DADADAVLSS RAQLGQLVHV DRLRFAHPVP
101: RAVGLRPVPG ARPHPFVGSP DPLVALSAPD HRGFIIQAAS PAESGPPLLP SASHRSNLPH LEEEKRTVFA AKENVVVGSG KNQSDAAGKP RRFSSTATSK
201: LTARKNGPGS GNGTGEQLRD PSPALKTSSR PSSPALGGRA SSRPSSPVPS KCEVPSLVGA KEDNRRVARE PAIIVPSRYR QPSPVGRKAA ASPMGRRGSM
301: SPARRLSGGL KVASPATGDG GGKKKIGLVV AGISRGSDSL VASVKSIRKS WDDSSPSSVV ASEPKEKEGS KSKLDKESFL RTQAAISRRL SDAEGVQANS
401: AEASSDEKRR TSRKTESFSE SDKNYMAPRI TVHDRKWTDG SIPFNCVSDN LARLGKEALQ RRSIASVAAA EALEEALVTE SVVRSLSMFS ELCSLSKTSN
501: PVPTIDRFLS IYDDVLKCST VAESLCANRN GGDGLKDATL TERSRLASLW VEAALATDLE VIHLLNNARL PKHKASEKQY KVLPCSTSNT WTRGHGVSET
601: ADLGRALRHE MQIWFLRFVE VAIDGGFRLF GETTDNAREA NRKDSGKVAA VLSQLKRIND WLDGVGRTAD GGETLREKIE RLKRKIYGFV IAHVGSAFDT
701: SISLTKVVVG AILFSFRDVS EKCDMGTLV

Best Arabidopsis Sequence Match ( AT4G13370.1 )
(BLAST)

001: MASLAPGILL KLLQCMNSGT RPTGDHRSAI LQVTGIVPAL AGSDLWPNQG FYVQISDSLN STYVSLSERD TDLILSNRLQ LGQFIYLERL EFATPVPRAA
101: GIRPVAGRHA FVGKPEPLIA RVSNGSKRDF VIQPVSDSEY SLDPIAVYLN NRRIDDDGDS DVKPNVRQAL APVNQNEENR NQIRNQKPKT TPQRFSSPAS
201: SKRSVSSGKK NCSGAVAVTV ERDPSPVVSG KGRRSASPVP SKCVVPSLAA AREENRKVAR EPSIVVPSRY RQPSPNGRKM NPSPSGRRMS ISPGRRLSSG
301: LKMTPMVGDS SGKKKMAVIA AGISKVSEAL VGSSAKNGNR KNWEEPLAGD GSAKNKPDHQ AILRTQAAMT RRLSDANRRK SGSSSSVCEE KAKSCSSESS
401: LLEEVSAFEG LGITYHERKW TDGSVPLDSI SDELAKLGKE AMKRRDFAAK AAARALEEAN ANECIIRCLS KFSELSSASK VGNPLRIINE FLKIYEDVMK
501: YSKIASENSF SLSSDQQNPI SLWVEAALAT NLEVVSLVKS HESPSSLKKS MPTRLSPRPS SKTDNIVGMW TDLDGLKETA KFAVNLQSEM QVWFIEFVEE
601: SLDNKNAAKR SLDGSSIAAV LSQLKQVNEW LDRVSSNQEN KITTMDKIER LKRKIYGFVI HHVGSTYDNS ASS

Arabidopsis Description

At4g13370 [Source:UniProtKB/TrEMBL;Acc:Q9T0K8]
SUBAcon: [mitochondrion,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.