Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU4Hr1G024210.1 | Barley | mitochondrion | 93.8 | 100.0 |
| TraesCS4B01G123300.1 | Wheat | mitochondrion | 87.86 | 94.87 |
| TraesCS4A01G192100.1 | Wheat | mitochondrion | 88.26 | 94.49 |
| TraesCS4D01G121400.1 | Wheat | mitochondrion | 88.13 | 92.52 |
| Os12t0120000-01 | Rice | cytosol, mitochondrion, nucleus | 72.16 | 77.26 |
| Os11t0120200-01 | Rice | cytosol, mitochondrion, nucleus | 72.16 | 77.26 |
| EES09151 | Sorghum | cytosol, mitochondrion, plastid | 68.21 | 71.41 |
| Zm00001d052368_P001 | Maize | cytosol, mitochondrion, plastid | 66.62 | 69.08 |
| GSMUA_Achr7P21900_001 | Banana | mitochondrion | 46.17 | 50.87 |
| GSMUA_Achr4P10330_001 | Banana | mitochondrion | 46.97 | 48.83 |
| KRH03797 | Soybean | mitochondrion | 41.95 | 45.17 |
| Bra032701.1-P | Field mustard | mitochondrion | 37.07 | 44.6 |
| CDY01127 | Canola | mitochondrion | 36.81 | 44.29 |
| AT4G13370.1 | Thale cress | endoplasmic reticulum, mitochondrion | 39.31 | 44.28 |
| CDY69222 | Canola | mitochondrion, plastid | 24.67 | 44.1 |
| PGSC0003DMT400001026 | Potato | mitochondrion | 39.45 | 43.46 |
| CDY64935 | Canola | mitochondrion | 37.34 | 43.27 |
| Solyc12g007020.1.1 | Tomato | mitochondrion | 39.05 | 43.21 |
| VIT_11s0016g04380.t01 | Wine grape | plastid | 40.37 | 43.1 |
| Bra034878.1-P | Field mustard | mitochondrion | 36.94 | 42.88 |
| CDY43695 | Canola | mitochondrion | 36.94 | 42.17 |
| KRH56681 | Soybean | vacuole | 41.42 | 38.2 |
| HORVU5Hr1G079460.1 | Barley | cytosol, mitochondrion, plastid | 26.12 | 26.33 |
| HORVU4Hr1G077070.1 | Barley | cytosol | 17.28 | 22.2 |
| HORVU3Hr1G000140.4 | Barley | plastid | 17.28 | 20.93 |
| HORVU4Hr1G014370.1 | Barley | nucleus, plastid | 12.4 | 20.17 |
| HORVU2Hr1G035200.1 | Barley | plastid | 9.89 | 19.33 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G024120.1 | EnsemblPlantsGene:HORVU4Hr1G024120 | InterPro:DUF936_pln | PANTHER:PTHR31928 | PANTHER:PTHR31928:SF3 | PFAM:PF06075 |
| SEG:seg | UniParc:UPI000B46149C | UniProt:A0A287NJN9 | MapMan:20.1.5.4.2 | : | : |
Description
No Description!
Coordinates
chrchr4H:-:136912268..136915577
Molecular Weight (calculated)
80108.0 Da
IEP (calculated)
10.743
GRAVY (calculated)
-0.291
Length
758 amino acids
Sequence
(BLAST)
(BLAST)
001: PRHTPTSLSL LKSLPFSLPL RPQISPRRIL KSLPLPFSSR SAARDRAMAT VTPGVLLRLL QAMHTDERVT GEHRSPALQV TAVVPALTAS TADSLLCPSN
101: GFLLQLSDGL HSTYVQPSPA DADALLSVRP HIVGHLVHLD RLRFASPVPR AVGLRPVPSS RSLPCVGNPE PLIVRSAACS RGYVIRPDSS PDAAPPLMPS
201: GSSAAPLSDA TDAAAKRAVL APRNGPEAAA LPGGSAAKRR FSSPAPAKQR DPSPAVKGAS RAASPSVKGA SRASSPAVRG TSRSSSPAPS KCVVPSLVAA
301: KEENRRAAKE PAIIVPSRYR QPSPAGGRRG AGSPGGGGRR GSLSPGSRRL SGEGGSKKKV GVLVSGISKM TDLGSGSAMK PVRKSWDESA MALAAAAAGT
401: VKKSKVKVDR DTILRTQEAM SRRLSDATAE LSSNDDSSVD EKPKPPKKTV SSAMKAKTAA PKIILHDAKW TDGSIPLVAV SDKLSKIGKE ATERRDAAAT
501: AAADALQEAL ITDSVIRNLS KFSELCSLSK TANPLPTVDC FLAVYEDTFK WKKTAESMAT TNGADEAALW EKSATHWVEA ALATELEVLK LVNSATGSIY
601: QKKITEKTKA PPAVEPPRTG MSKRPSLGAS AKVQSRVSPL PSAAWPKTPG MNETVELANT LCREMHVWFL KFVNEAMDVG FHLFEDQNMV TRGKQSGHIT
701: VVLSQFKKIS DWLDGVGKVA DEDATKETVE RLKRKIYQFV ISRMGSAFET SVSVSAKS
101: GFLLQLSDGL HSTYVQPSPA DADALLSVRP HIVGHLVHLD RLRFASPVPR AVGLRPVPSS RSLPCVGNPE PLIVRSAACS RGYVIRPDSS PDAAPPLMPS
201: GSSAAPLSDA TDAAAKRAVL APRNGPEAAA LPGGSAAKRR FSSPAPAKQR DPSPAVKGAS RAASPSVKGA SRASSPAVRG TSRSSSPAPS KCVVPSLVAA
301: KEENRRAAKE PAIIVPSRYR QPSPAGGRRG AGSPGGGGRR GSLSPGSRRL SGEGGSKKKV GVLVSGISKM TDLGSGSAMK PVRKSWDESA MALAAAAAGT
401: VKKSKVKVDR DTILRTQEAM SRRLSDATAE LSSNDDSSVD EKPKPPKKTV SSAMKAKTAA PKIILHDAKW TDGSIPLVAV SDKLSKIGKE ATERRDAAAT
501: AAADALQEAL ITDSVIRNLS KFSELCSLSK TANPLPTVDC FLAVYEDTFK WKKTAESMAT TNGADEAALW EKSATHWVEA ALATELEVLK LVNSATGSIY
601: QKKITEKTKA PPAVEPPRTG MSKRPSLGAS AKVQSRVSPL PSAAWPKTPG MNETVELANT LCREMHVWFL KFVNEAMDVG FHLFEDQNMV TRGKQSGHIT
701: VVLSQFKKIS DWLDGVGKVA DEDATKETVE RLKRKIYQFV ISRMGSAFET SVSVSAKS
001: MASLAPGILL KLLQCMNSGT RPTGDHRSAI LQVTGIVPAL AGSDLWPNQG FYVQISDSLN STYVSLSERD TDLILSNRLQ LGQFIYLERL EFATPVPRAA
101: GIRPVAGRHA FVGKPEPLIA RVSNGSKRDF VIQPVSDSEY SLDPIAVYLN NRRIDDDGDS DVKPNVRQAL APVNQNEENR NQIRNQKPKT TPQRFSSPAS
201: SKRSVSSGKK NCSGAVAVTV ERDPSPVVSG KGRRSASPVP SKCVVPSLAA AREENRKVAR EPSIVVPSRY RQPSPNGRKM NPSPSGRRMS ISPGRRLSSG
301: LKMTPMVGDS SGKKKMAVIA AGISKVSEAL VGSSAKNGNR KNWEEPLAGD GSAKNKPDHQ AILRTQAAMT RRLSDANRRK SGSSSSVCEE KAKSCSSESS
401: LLEEVSAFEG LGITYHERKW TDGSVPLDSI SDELAKLGKE AMKRRDFAAK AAARALEEAN ANECIIRCLS KFSELSSASK VGNPLRIINE FLKIYEDVMK
501: YSKIASENSF SLSSDQQNPI SLWVEAALAT NLEVVSLVKS HESPSSLKKS MPTRLSPRPS SKTDNIVGMW TDLDGLKETA KFAVNLQSEM QVWFIEFVEE
601: SLDNKNAAKR SLDGSSIAAV LSQLKQVNEW LDRVSSNQEN KITTMDKIER LKRKIYGFVI HHVGSTYDNS ASS
101: GIRPVAGRHA FVGKPEPLIA RVSNGSKRDF VIQPVSDSEY SLDPIAVYLN NRRIDDDGDS DVKPNVRQAL APVNQNEENR NQIRNQKPKT TPQRFSSPAS
201: SKRSVSSGKK NCSGAVAVTV ERDPSPVVSG KGRRSASPVP SKCVVPSLAA AREENRKVAR EPSIVVPSRY RQPSPNGRKM NPSPSGRRMS ISPGRRLSSG
301: LKMTPMVGDS SGKKKMAVIA AGISKVSEAL VGSSAKNGNR KNWEEPLAGD GSAKNKPDHQ AILRTQAAMT RRLSDANRRK SGSSSSVCEE KAKSCSSESS
401: LLEEVSAFEG LGITYHERKW TDGSVPLDSI SDELAKLGKE AMKRRDFAAK AAARALEEAN ANECIIRCLS KFSELSSASK VGNPLRIINE FLKIYEDVMK
501: YSKIASENSF SLSSDQQNPI SLWVEAALAT NLEVVSLVKS HESPSSLKKS MPTRLSPRPS SKTDNIVGMW TDLDGLKETA KFAVNLQSEM QVWFIEFVEE
601: SLDNKNAAKR SLDGSSIAAV LSQLKQVNEW LDRVSSNQEN KITTMDKIER LKRKIYGFVI HHVGSTYDNS ASS
Arabidopsis Description
At4g13370 [Source:UniProtKB/TrEMBL;Acc:Q9T0K8]
SUBAcon: [mitochondrion,endoplasmic reticulum]
SUBAcon: [mitochondrion,endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.