Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 3
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G298200.1 | Wheat | cytosol | 96.1 | 96.1 |
| TraesCS4D01G297000.1 | Wheat | cytosol | 95.59 | 95.59 |
| TraesCS4A01G006800.1 | Wheat | cytosol | 94.92 | 94.92 |
| Zm00001d027907_P002 | Maize | cytosol, mitochondrion, nucleus, peroxisome | 50.0 | 80.82 |
| EER95393 | Sorghum | cytosol | 75.59 | 78.8 |
| Os03t0181800-01 | Rice | cytosol | 76.1 | 78.36 |
| Zm00001d038770_P001 | Maize | cytosol | 32.88 | 77.6 |
| Zm00001d032126_P001 | Maize | cytosol | 30.68 | 77.35 |
| Zm00001d017634_P001 | Maize | cytosol | 31.36 | 74.3 |
| Zm00001d012110_P001 | Maize | nucleus | 30.51 | 72.87 |
| KRG89920 | Soybean | extracellular, mitochondrion | 18.81 | 60.0 |
| GSMUA_Achr1P21840_001 | Banana | extracellular | 43.22 | 47.66 |
| VIT_09s0002g00760.t01 | Wine grape | mitochondrion | 39.49 | 44.05 |
| CDY52268 | Canola | mitochondrion | 36.27 | 42.21 |
| PGSC0003DMT400074262 | Potato | cytosol | 37.12 | 42.12 |
| AT3G14170.2 | Thale cress | cytosol, golgi, mitochondrion, nucleus | 36.1 | 42.09 |
| Solyc03g122080.2.1 | Tomato | mitochondrion | 36.95 | 42.08 |
| PGSC0003DMT400058976 | Potato | mitochondrion | 36.78 | 41.89 |
| CDX97548 | Canola | mitochondrion | 35.93 | 41.81 |
| KRH47653 | Soybean | endoplasmic reticulum, nucleus, peroxisome | 37.63 | 41.5 |
| Bra027368.1-P | Field mustard | mitochondrion | 35.59 | 41.42 |
| Solyc12g049500.1.1 | Tomato | cytosol | 35.08 | 40.75 |
| KRH06232 | Soybean | nucleus | 36.44 | 40.26 |
| KRH69022 | Soybean | golgi, mitochondrion | 36.95 | 40.22 |
| HORVU5Hr1G079460.1 | Barley | cytosol, mitochondrion, plastid | 28.14 | 22.07 |
| HORVU4Hr1G024210.1 | Barley | mitochondrion | 22.2 | 18.42 |
| HORVU3Hr1G000140.4 | Barley | plastid | 18.98 | 17.89 |
| HORVU4Hr1G024120.1 | Barley | plastid | 22.2 | 17.28 |
| HORVU2Hr1G035200.1 | Barley | plastid | 11.36 | 17.27 |
| HORVU4Hr1G014370.1 | Barley | nucleus, plastid | 13.39 | 16.95 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G077070.1 | EnsemblPlantsGene:HORVU4Hr1G077070 | InterPro:DUF936_pln | PANTHER:PTHR31928 | PANTHER:PTHR31928:SF2 | PFAM:PF06075 |
| SEG:seg | UniParc:UPI0002958742 | UniProt:M0UJZ3 | MapMan:20.1.5.4.2 | : | : |
Description
No Description!
Coordinates
chrchr4H:+:602689567..602694767
Molecular Weight (calculated)
64454.6 Da
IEP (calculated)
10.425
GRAVY (calculated)
-0.597
Length
590 amino acids
Sequence
(BLAST)
(BLAST)
001: MASLTPGILL KVLKHINSDV KVCGEHRSIL LQVISIVPAI TGSELWPDHG FFIKVSDSSH STYVSLSKED NELILSNKLQ LGQFIYVEKV QSSVPVPVLV
101: GVRAVPGRNP FIGNPKDLMQ MSTPSGVLEA LDQQRKTSKP TELSENEKEN SQRKVVIKEQ KAGVASRYML GVSSNNGKIT NLNSSMDSDK SSNGGSSICD
201: ANQKLISSAT KVKQEPKHQE RSNIISPNNA KLASTKQEVN KDIRKNSGRP LSQNGSTVVK KQMPRDIKRE SATEGSSPPN LYRSSPSTPA RTSPPKLRSS
301: PPTPARTSPP RISVPAKANA TSSPISSVPN IKRRVTETVS WDTLPTCLIK SGKAVVRRKT IALIVAAEAQ REATAAASLV KGLGIFTEIL KSTEGDPHGA
401: VNKFFQLNRL IIQQNIFWKD NSLDSGKESR PEKEKPSRKV SASQNKCAGN TAAKNPDDAY TSGKLEWARE DGFKEIRRSW IDLKRESQSW FLNFLEDALA
501: SGFKFESRAK NTTRERVRGQ SKGGDGQIAV RLSQLKETSN WLDQQLQSEA GKPDDGLVET IERLKQKAYS CLLGTVETAA SALEGRNGCS
101: GVRAVPGRNP FIGNPKDLMQ MSTPSGVLEA LDQQRKTSKP TELSENEKEN SQRKVVIKEQ KAGVASRYML GVSSNNGKIT NLNSSMDSDK SSNGGSSICD
201: ANQKLISSAT KVKQEPKHQE RSNIISPNNA KLASTKQEVN KDIRKNSGRP LSQNGSTVVK KQMPRDIKRE SATEGSSPPN LYRSSPSTPA RTSPPKLRSS
301: PPTPARTSPP RISVPAKANA TSSPISSVPN IKRRVTETVS WDTLPTCLIK SGKAVVRRKT IALIVAAEAQ REATAAASLV KGLGIFTEIL KSTEGDPHGA
401: VNKFFQLNRL IIQQNIFWKD NSLDSGKESR PEKEKPSRKV SASQNKCAGN TAAKNPDDAY TSGKLEWARE DGFKEIRRSW IDLKRESQSW FLNFLEDALA
501: SGFKFESRAK NTTRERVRGQ SKGGDGQIAV RLSQLKETSN WLDQQLQSEA GKPDDGLVET IERLKQKAYS CLLGTVETAA SALEGRNGCS
001: MASLTPRVLI KLLETMNTNI KVRGEYRSVL LQVISIVPAL AGSELWPNQG FFIKVSDSSH STYVSLSNED NELILNNKLG IGQFFYVDKL DAGTPVPVLV
101: GVRPISGRHP FVGNPKDLMQ MLVPSETTPR EEEYHNQKKK DGARSNIVEN IRKHQPFVIK EEKTGVASRY MKGISNSKAS GSDSSSGGSN NEGETGSIMV
201: AKKVGVLAKG KQREHKDQAR QAGPLQCRPA TAPTKAEPKK LSLSSTVNYI NRKSNSAEDA SWSSLPVSLS KLGKGMLRRR NLAALIAAEV QREALAASHL
301: IKCISMFAEL SSNASPKNPH TSLRNFFTLQ SILDQVQVTV VASKDKSFQP VNIHSLWMEP EKLSKKASLS SSRATMKPSK ALTEAEKLEW VKGNGTEEIK
401: ELTNTLKRET RSWFLKFLED ALDTGLHATV PEKKGKTKGA RLAEPDNHIA ETLSQLKQAN EWLEKVKNDN LSSDNSLLEN IERLKKKIYS CLLLYVDSAA
501: SAIGV
101: GVRPISGRHP FVGNPKDLMQ MLVPSETTPR EEEYHNQKKK DGARSNIVEN IRKHQPFVIK EEKTGVASRY MKGISNSKAS GSDSSSGGSN NEGETGSIMV
201: AKKVGVLAKG KQREHKDQAR QAGPLQCRPA TAPTKAEPKK LSLSSTVNYI NRKSNSAEDA SWSSLPVSLS KLGKGMLRRR NLAALIAAEV QREALAASHL
301: IKCISMFAEL SSNASPKNPH TSLRNFFTLQ SILDQVQVTV VASKDKSFQP VNIHSLWMEP EKLSKKASLS SSRATMKPSK ALTEAEKLEW VKGNGTEEIK
401: ELTNTLKRET RSWFLKFLED ALDTGLHATV PEKKGKTKGA RLAEPDNHIA ETLSQLKQAN EWLEKVKNDN LSSDNSLLEN IERLKKKIYS CLLLYVDSAA
501: SAIGV
Arabidopsis Description
Plant protein of unknown function (DUF936) [Source:TAIR;Acc:AT3G14170]
SUBAcon: [mitochondrion,golgi,nucleus,cytosol]
SUBAcon: [mitochondrion,golgi,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.