Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 2
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc12g049500.1.1 | Tomato | cytosol | 91.15 | 93.31 |
| PGSC0003DMT400058976 | Potato | mitochondrion | 69.04 | 69.31 |
| VIT_09s0002g00760.t01 | Wine grape | mitochondrion | 56.15 | 55.2 |
| KRH69022 | Soybean | golgi, mitochondrion | 53.65 | 51.48 |
| AT3G14170.2 | Thale cress | cytosol, golgi, mitochondrion, nucleus | 47.12 | 48.42 |
| Zm00001d032126_P001 | Maize | cytosol | 21.73 | 48.29 |
| CDY52268 | Canola | mitochondrion | 46.92 | 48.13 |
| Bra027368.1-P | Field mustard | mitochondrion | 46.35 | 47.53 |
| CDX97548 | Canola | mitochondrion | 46.35 | 47.53 |
| Zm00001d038770_P001 | Maize | cytosol | 22.5 | 46.8 |
| KRH47653 | Soybean | endoplasmic reticulum, nucleus, peroxisome | 47.88 | 46.54 |
| KRH06232 | Soybean | nucleus | 47.5 | 46.25 |
| GSMUA_Achr1P21840_001 | Banana | extracellular | 44.23 | 42.99 |
| Zm00001d027907_P002 | Maize | cytosol, mitochondrion, nucleus, peroxisome | 29.04 | 41.37 |
| Zm00001d017634_P001 | Maize | cytosol | 19.04 | 39.76 |
| Os03t0181800-01 | Rice | cytosol | 43.08 | 39.09 |
| EER95393 | Sorghum | cytosol | 41.92 | 38.52 |
| TraesCS4A01G006800.1 | Wheat | cytosol | 42.5 | 37.46 |
| TraesCS4D01G297000.1 | Wheat | cytosol | 42.31 | 37.29 |
| HORVU4Hr1G077070.1 | Barley | cytosol | 42.12 | 37.12 |
| TraesCS4B01G298200.1 | Wheat | cytosol | 41.92 | 36.95 |
| Zm00001d012110_P001 | Maize | nucleus | 13.27 | 27.94 |
| PGSC0003DMT400079932 | Potato | cytosol | 25.77 | 22.41 |
| PGSC0003DMT400001026 | Potato | mitochondrion | 29.42 | 22.24 |
| PGSC0003DMT400079598 | Potato | mitochondrion | 24.81 | 21.64 |
| PGSC0003DMT400008388 | Potato | cytosol | 26.35 | 20.92 |
| PGSC0003DMT400066158 | Potato | nucleus | 26.15 | 20.83 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400074262 | EnsemblPlantsGene:PGSC0003DMG400028857 | EntrezGene:102584804 | InterPro:DUF936_pln | PANTHER:PTHR31928 | PANTHER:PTHR31928:SF2 |
| PFAM:PF06075 | PGSC:PGSC0003DMG400028857 | RefSeq:XP_006362090.1 | RefSeq:XP_015158318.1 | SEG:seg | UniParc:UPI000295DFE5 |
| UniProt:M1CTF2 | MapMan:20.1.5.4.2 | : | : | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400028857]
Coordinates
chr12:-:52945285..52948043
Molecular Weight (calculated)
57789.9 Da
IEP (calculated)
9.498
GRAVY (calculated)
-0.565
Length
520 amino acids
Sequence
(BLAST)
(BLAST)
001: MASLVPEVLI KLLQSMNSNV KVRGEYRSVL LQVISIVPAL SGSELWPNHG FFIKVSDSSH STYVTLSKED NEFILNNKLQ LGQFFYVDKM EAGTPVPVLV
101: GVRPIPGRHP FVGNPKDLMQ MLEQSEVPDQ ENSTTGPKLN ELPEMKKENE KKKKFVIKEE KAVVASRYMQ GVSNQNAKIG GNDQGTGAKG VENESNGADH
201: KVVHLKGKQP EVKSQTQPTT PSRSRSDAFS PNSDVNVLNS RELSTTPRFS TLKRTSSKPE NIRENGPFSE TLIPWSSLPA NLAKPGKGIL RRKKLASLIA
301: AEAQEEALTA TNLLHCFSMF AELCSSASPE SPHLNLSKFF TLNQLMDQPN NTNKTNEQIL DNFASKLSLQ DKEKSSKKTR SLNDTKNTPK SLIEISVSEK
401: VEWAKGDGSK GIKELRDVLF NEMQSWFLKF MDEALDVGFQ LSEQEHKKKT RVVQQTDTNN QIALALSQLK HANDWLDKLQ SKSTLNKDVA ETVDRLKQKL
501: YACLLLHIDS AASALGKPCS
101: GVRPIPGRHP FVGNPKDLMQ MLEQSEVPDQ ENSTTGPKLN ELPEMKKENE KKKKFVIKEE KAVVASRYMQ GVSNQNAKIG GNDQGTGAKG VENESNGADH
201: KVVHLKGKQP EVKSQTQPTT PSRSRSDAFS PNSDVNVLNS RELSTTPRFS TLKRTSSKPE NIRENGPFSE TLIPWSSLPA NLAKPGKGIL RRKKLASLIA
301: AEAQEEALTA TNLLHCFSMF AELCSSASPE SPHLNLSKFF TLNQLMDQPN NTNKTNEQIL DNFASKLSLQ DKEKSSKKTR SLNDTKNTPK SLIEISVSEK
401: VEWAKGDGSK GIKELRDVLF NEMQSWFLKF MDEALDVGFQ LSEQEHKKKT RVVQQTDTNN QIALALSQLK HANDWLDKLQ SKSTLNKDVA ETVDRLKQKL
501: YACLLLHIDS AASALGKPCS
001: MASLTPRVLI KLLETMNTNI KVRGEYRSVL LQVISIVPAL AGSELWPNQG FFIKVSDSSH STYVSLSNED NELILNNKLG IGQFFYVDKL DAGTPVPVLV
101: GVRPISGRHP FVGNPKDLMQ MLVPSETTPR EEEYHNQKKK DGARSNIVEN IRKHQPFVIK EEKTGVASRY MKGISNSKAS GSDSSSGGSN NEGETGSIMV
201: AKKVGVLAKG KQREHKDQAR QAGPLQCRPA TAPTKAEPKK LSLSSTVNYI NRKSNSAEDA SWSSLPVSLS KLGKGMLRRR NLAALIAAEV QREALAASHL
301: IKCISMFAEL SSNASPKNPH TSLRNFFTLQ SILDQVQVTV VASKDKSFQP VNIHSLWMEP EKLSKKASLS SSRATMKPSK ALTEAEKLEW VKGNGTEEIK
401: ELTNTLKRET RSWFLKFLED ALDTGLHATV PEKKGKTKGA RLAEPDNHIA ETLSQLKQAN EWLEKVKNDN LSSDNSLLEN IERLKKKIYS CLLLYVDSAA
501: SAIGV
101: GVRPISGRHP FVGNPKDLMQ MLVPSETTPR EEEYHNQKKK DGARSNIVEN IRKHQPFVIK EEKTGVASRY MKGISNSKAS GSDSSSGGSN NEGETGSIMV
201: AKKVGVLAKG KQREHKDQAR QAGPLQCRPA TAPTKAEPKK LSLSSTVNYI NRKSNSAEDA SWSSLPVSLS KLGKGMLRRR NLAALIAAEV QREALAASHL
301: IKCISMFAEL SSNASPKNPH TSLRNFFTLQ SILDQVQVTV VASKDKSFQP VNIHSLWMEP EKLSKKASLS SSRATMKPSK ALTEAEKLEW VKGNGTEEIK
401: ELTNTLKRET RSWFLKFLED ALDTGLHATV PEKKGKTKGA RLAEPDNHIA ETLSQLKQAN EWLEKVKNDN LSSDNSLLEN IERLKKKIYS CLLLYVDSAA
501: SAIGV
Arabidopsis Description
Plant protein of unknown function (DUF936) [Source:TAIR;Acc:AT3G14170]
SUBAcon: [mitochondrion,golgi,nucleus,cytosol]
SUBAcon: [mitochondrion,golgi,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.