CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi

Predictor Summary:

nucleus 2
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 4
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, mitochondrion
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	nucleus
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG89920	Soybean	extracellular, mitochondrion	31.73	92.97
KRH47653	Soybean	endoplasmic reticulum, nucleus, peroxisome	67.71	68.6
KRH06232	Soybean	nucleus	66.42	67.42
VIT_09s0002g00760.t01	Wine grape	mitochondrion	63.28	64.84
PGSC0003DMT400074262	Potato	cytosol	51.48	53.65
Solyc12g049500.1.1	Tomato	cytosol	47.97	51.18
Solyc03g122080.2.1	Tomato	mitochondrion	48.71	50.97
PGSC0003DMT400058976	Potato	mitochondrion	48.34	50.58
Zm00001d032126_P001	Maize	cytosol	21.03	48.72
Zm00001d038770_P001	Maize	cytosol	21.4	46.4
GSMUA_Achr1P21840_001	Banana	extracellular	42.62	43.18
Zm00001d027907_P002	Maize	cytosol, mitochondrion, nucleus, peroxisome	27.31	40.55
EER95393	Sorghum	cytosol	40.96	39.22
Os03t0181800-01	Rice	cytosol	41.33	39.09
Zm00001d017634_P001	Maize	cytosol	17.71	38.55
TraesCS4D01G297000.1	Wheat	cytosol	40.41	37.12
HORVU4Hr1G077070.1	Barley	cytosol	40.22	36.95
TraesCS4B01G298200.1	Wheat	cytosol	40.22	36.95
TraesCS4A01G006800.1	Wheat	cytosol	40.04	36.78
Zm00001d012110_P001	Maize	nucleus	13.1	28.74
KRH23226	Soybean	nucleus	33.03	23.74
KRH24591	Soybean	nucleus	32.29	23.58
KRH29601	Soybean	nucleus	31.92	23.32
KRH10106	Soybean	nucleus	32.84	23.12
KRH69557	Soybean	extracellular, mitochondrion, nucleus, vacuole	23.06	21.82
KRH43579	Soybean	plastid	22.88	21.79
KRH03797	Soybean	mitochondrion	28.23	21.73
KRH13842	Soybean	plastid	22.32	21.45
KRH74610	Soybean	cytosol, extracellular, mitochondrion, nucleus	22.69	20.92
KRH56681	Soybean	vacuole	28.23	18.61

Protein Annotations

EMBL:ACUP02002129	EnsemblPlants:KRH69022	EnsemblPlantsGene:GLYMA_03G264000	EntrezGene:100785776	InterPro:DUF936_pln	PANTHER:PTHR31928
PANTHER:PTHR31928:SF2	PFAM:PF06075	ProteinID:KRH69021.1	ProteinID:KRH69022	ProteinID:KRH69022.1	SignalP:SignalP-noTM
UniParc:UPI0002958076	UniProt:K7KH86	MapMan:20.1.5.4.2	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:45671813..45676016

Molecular Weight (calculated)

59825.9 Da

IEP (calculated)

9.945

GRAVY (calculated)

-0.472

Length

542 amino acids

Sequence
(BLAST)

001: MLLLSVTIWN IIGRRMASLV PGVLLKLLQS MNSNVKVRGE YRSVLLQVIS IVPSLSGSEL WPNQGFFIKV SDSSHSTYVS LSKDDNEFIL NNKLQLGQFF
101: YVDRIEAGTP VPTLVGVRPV PGRHPFEGNP KDLMQILEQS DNDGVNGSKS MDLTEAKENP SSRQKIVIKE EKVGVASRYM QGVLNPNSRV NGADTNIGSK
201: GNDSENGVDS KKVESSKGKQ LEIKGQVLPI TPTGTRLEAL SPKQDIPQCN IRETVIAPSK RTSAKHSSTK QENLNMNLLS RGKDKSNNTE AIPWSALPVK
301: LLKPGKVILR RKHLASQVVV EAQKEASAAA SIVKCLSMFA NICSSASSEN PHATLNKFFA LQQLMDQPNG TTQLKDKPIQ LYKIPTPAEK HKSGKTAGVM
401: PVKSTSKSPK PLNELSRTEK QEWAKEDGTK KINELKEVLL NETRSWFLMY LEKILDAGFS VGSQEMGKES KDNAGRQMEQ ANHIALTLSH LKHANEWLDK
501: LRSSSNTESE ELVETVDRLK QKVYSCLLVH IDSAALALEN RA

Best Arabidopsis Sequence Match ( AT3G14170.2 )
(BLAST)

001: MASLTPRVLI KLLETMNTNI KVRGEYRSVL LQVISIVPAL AGSELWPNQG FFIKVSDSSH STYVSLSNED NELILNNKLG IGQFFYVDKL DAGTPVPVLV
101: GVRPISGRHP FVGNPKDLMQ MLVPSETTPR EEEYHNQKKQ KDGARSNIVE NIRKHQPFVI KEEKTGVASR YMKGISNSKA SGSDSSSGGS NNEGETGSIM
201: VAKKVGVLAK GKQREHKDQA RQAGPLQCRP ATAPTKAEPK KLSLSSTVNY INRKSNSAED ASWSSLPVSL SKLGKGMLRR RNLAALIAAE VQREALAASH
301: LIKCISMFAE LSSNASPKNP HTSLRNFFTL QSILDQVQVT VVASKDKSFQ PVNIHSLWME PEKLSKKASL SSSRATMKPS KALTEAEKLE WVKGNGTEEI
401: KELTNTLKRE TRSWFLKFLE DALDTGLHAT VPEKKGKTKG ARLAEPDNHI AETLSQLKQA NEWLEKVKND NLSSDNSLLE NIERLKKKIY SCLLLYVDSA
501: ASAIGV

Arabidopsis Description

Plant protein of unknown function (DUF936) [Source:TAIR;Acc:AT3G14170]
SUBAcon: [mitochondrion,golgi,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.