Factsheet for Zm00001d012110_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

mitochondrion 3
cytosol 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d038770_P001	Maize	cytosol	65.99	65.2
Zm00001d017634_P001	Maize	cytosol	64.78	64.26
Zm00001d032126_P001	Maize	cytosol	59.92	63.25
Zm00001d027907_P002	Maize	cytosol, mitochondrion, nucleus, peroxisome	89.47	60.55
EER95393	Sorghum	cytosol	89.07	38.87
Os03t0181800-01	Rice	cytosol	76.92	33.16
KRG89920	Soybean	extracellular, mitochondrion	24.7	32.97
TraesCS4B01G298200.1	Wheat	cytosol	73.68	30.85
TraesCS4D01G297000.1	Wheat	cytosol	73.28	30.68
TraesCS4A01G006800.1	Wheat	cytosol	73.28	30.68
HORVU4Hr1G077070.1	Barley	cytosol	72.87	30.51
GSMUA_Achr1P21840_001	Banana	extracellular	35.22	16.26
VIT_09s0002g00760.t01	Wine grape	mitochondrion	30.77	14.37
Solyc03g122080.2.1	Tomato	mitochondrion	29.15	13.9
CDX97548	Canola	mitochondrion	28.34	13.81
KRH47653	Soybean	endoplasmic reticulum, nucleus, peroxisome	29.55	13.64
AT3G14170.2	Thale cress	cytosol, golgi, mitochondrion, nucleus	27.94	13.64
Bra027368.1-P	Field mustard	mitochondrion	27.94	13.61
CDY52268	Canola	mitochondrion	27.94	13.61
PGSC0003DMT400058976	Potato	mitochondrion	28.34	13.51
KRH06232	Soybean	nucleus	28.74	13.3
PGSC0003DMT400074262	Potato	cytosol	27.94	13.27
KRH69022	Soybean	golgi, mitochondrion	28.74	13.1
Solyc12g049500.1.1	Tomato	cytosol	24.7	12.01
Zm00001d031700_P003	Maize	cytosol, mitochondrion, plastid	24.29	8.04
Zm00001d021181_P005	Maize	cytosol, mitochondrion, nucleus	21.86	7.26
Zm00001d006130_P001	Maize	mitochondrion, plastid	20.24	6.57
Zm00001d040147_P001	Maize	nucleus	14.57	5.98
Zm00001d006732_P001	Maize	plastid	15.38	5.86
Zm00001d052368_P001	Maize	cytosol, mitochondrion, plastid	15.38	5.2

Protein Annotations

EnsemblPlants:Zm00001d012110_P001	EnsemblPlants:Zm00001d012110_T001	EnsemblPlantsGene:Zm00001d012110	InterPro:DUF936_pln	ncoils:Coil	PANTHER:PTHR31928
PANTHER:PTHR31928:SF2	PFAM:PF06075	ProteinID:AQK98865.1	SEG:seg	UniParc:UPI0008440689	UniProt:A0A1D6G6P7
MapMan:35.2	:	:	:	:	:

Description

DUF936 family protein

Coordinates

chr8:+:168383836..168385029

Molecular Weight (calculated)

26746.2 Da

IEP (calculated)

10.903

GRAVY (calculated)

-0.716

Length

247 amino acids

Sequence
(BLAST)

001: MASLTPGILL KVLKNINSDV KFIYVEKVQS SIPVPILVRV RPVPGRNPCI GNPKDLMQMS TPSGITEAPD HQRRTSKSAD MSESEKENLQ RKVVIKEQKI
101: VVASRYMLGV SSNNGKITSL NSSIDSDKSN GGSTISEPNK KSVAPKVRQE AKPQLVSTKQ EISKDTRKNG GASPSPNGCA VVKKQMPKES KKESATERRS
201: PPKLYKSSPT PARTSPTKLG PAAKQNGNSS PVPSISTVKR RVTETIY

Best Arabidopsis Sequence Match ( AT3G14170.2 )
(BLAST)

001: MASLTPRVLI KLLETMNTNI KVRGEYRSVL LQVISIVPAL AGSELWPNQG FFIKVSDSSH STYVSLSNED NELILNNKLG IGQFFYVDKL DAGTPVPVLV
101: GVRPISGRHP FVGNPKDLMQ MLVPSETTPR EEEYHNQKKQ KDGARSNIVE NIRKHQPFVI KEEKTGVASR YMKGISNSKA SGSDSSSGGS NNEGETGSIM
201: VAKKVGVLAK GKQREHKDQA RQAGPLQCRP ATAPTKAEPK KLSLSSTVNY INRKSNSAED ASWSSLPVSL SKLGKGMLRR RNLAALIAAE VQREALAASH
301: LIKCISMFAE LSSNASPKNP HTSLRNFFTL QSILDQVQVT VVASKDKSFQ PVNIHSLWME PEKLSKKASL SSSRATMKPS KALTEAEKLE WVKGNGTEEI
401: KELTNTLKRE TRSWFLKFLE DALDTGLHAT VPEKKGKTKG ARLAEPDNHI AETLSQLKQA NEWLEKVKND NLSSDNSLLE NIERLKKKIY SCLLLYVDSA
501: ASAIGV

Arabidopsis Description

Plant protein of unknown function (DUF936) [Source:TAIR;Acc:AT3G14170]
SUBAcon: [mitochondrion,golgi,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.